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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0244100 |
Transcript ID | LotjaGi3g1v0244100.4 |
Related isoforms 7 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Alpha-1,3/1,6-mannosyltransferase ALG2-like protein; TAIR: AT1G78800.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|Q7KWM5|ALG2_DICDI Alpha-1,3/1,6-mannosyltransferase ALG2; TrEMBL-Plants: tr|A0A151S9A8|A0A151S9A8_CAJCA Alpha-1,3-mannosyltransferase ALG2; Found in the gene: LotjaGi3g1v0244100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:39799501..39803242) extracted from Lotus japonicus Gifu genome v1.2.
AAAGACCATGAGGTAAAACAAAACATGACATTCCATGTATGTTTTCTCGCCGTACGCATTGACCACCAACCCTACTCCGC CGCCGCCAACGTTATCACCGCCGATCTCTGTTGCTGCCAACAGTATCATTCCGATCTCCGCCCTATTACGCCATGGTTCG CCACTCAAACCATTGGAATCGCACTCTCTGGTTCTGATGTAAGCCTAAACGTTTCCTCTTTGCTTCGATTTAGAATTCAA TTTTAGCTAAATCTTCGTTTTCTACCTCATTCATTTCTGTTTCTCACATTTCTTTCATTCAACCCACTGGTTTCTTAAAT TCTTCTTCGATTTCTTCTTCGTTTTCACGGCAATTTCATTTTTGATTTCTCACTCGCACTATATTTTCGCGATCTGCAAT CAGAATCGGTTATCTTGAAGTTGATCACTCTCGTGCTTATTGCTTCCGTGAGGCTGAAAGTATTTGATCCACTAATTTGA TATTTGATCATTGCGGTGCTTATTGTTTGTTACAGCTCAACCTGCATTTTCTCTTTCACCTTGGCATCTTAGATTGAAAT CAAGGTCAGTGCATCAAATTCAATTGTATGTTATACTAAGTCTTTAGCTTGTGTTTTTGTGACTGGATATGCTTGGGAAA CTACATTGACATGATTATAGCTGTGTGCTGCTGATGGCCCGCCACCGTCACAACCTCAGAATCTCTGGCAGTGATTGATT TCTGATTTGCTATTTTCATCTTCAATTTCCCACTCAACATGGCAAAGGGCACAAGCTCAGAGATGAACATTGCCATTATC CACCCTGATCTTGGCATAGGCAATAATTAACTGCCCTTTATTCTATTCGAATCAAAATCAAAAAAAATTCTGTGCCCATT AATTTTTTTCTTCCCTATACTTACAGTTGATTCTTATTACCTTGTGATTGTTTTGCAGGTGGAGCTGAAAGATTGATCGT TGATGCAGCTGTTGAGCTTGCATCCCATGGTCATAATGTTCATGTTTTTACTGCTCATCATGATCGAAATCGATGTTTTG AGGAAACTGTTGCTGGTGAATCTCTGTCTTTGTATATATATGTGTCTGTGATTGCCACATTTTGTGTTCTTTATAAGGAA ATGCATTGTGTTAAGATATAGTTTGACTTGTAATTGTTTCAGGTACATTTCCTGTTACTGTCTATGGTTCCTTTCTTCCG CGGCATATATTCTACCGTCTTCATGCATTGTGTGCTTACCTTCGATGCCTATTTGTTGCTTTCTGTGTGCTTTTCATGTG GCCATCATTTGATGTTATACTGGCTGATCAGGTCTCTGTAGTCATTCCCATTTTGAAGCTTAAAAGGTCAACAAAGGTAG CTAGCAATAAGAATCATGTGTTGTAAATTCAAGTTTTGGCATTCACGGTTCGTCTTAGTTGCTTATTTTTCTTGCTAGGT TGTGTTCTACTGTCATTTTCCTGACTTGTTGCTGGCTCAGCATACAACTTTTGTTCGGAGGATGTATAGGAAACCCATAG ACTATGTAGAAGAAATAACAACTGGTTGGACTTTGTATTCTTGCTTTATGTTTATTTATTTATTTCTGAACAAGGTTTTA AATTGTGGTCACATCACGGTTGCGTTGCGGTCCTTCATATTGTGATTAAACATGGCTGTTGCGTCCAAATCGCGGTCGGG CTCCAAAACCTTGATGTTGCGGACCTTGATTTAAAACCATGTTTCTGAACTTCTTTTCTCACTTGTAATCAAGCATCTTA TTAAGCATTGCTAAATTGCAGGAATGGCTGATTTGGTACTTGTCAACAGCAACTTCACTAAATCTACTTTTGCAAATACG TTTAAGCAACTAGATGCTAAAGGAATTCGACCAGCTGTTCTATACCCAGCAGTCAATGTGGATCAGTTCAATGAACCCAC TTCCTTTAGGTAAATGACATGTTTGTAGATGTATGGTCAATACAAGATTATGCATGTAGCTTATTCTTATAACCAATTTT ATTATAATTATGCTTCTGCTGTATTTTTTTTCCTGTTGTAGGCTGAATTTTCTTTCCATTAACCGCTTTGAGAGGAAGAA GAACATAGAGTTAGCAATTTCAGCTTTTTCTATGCTTTGCTCACCTAATGGACTTCTTAAAAATCAAGATACTACCGATG CTTCTTTGATTGTTGCAGGTCAGTATGTTTTTCTTATGACTTCACATTTCTTAAGACAGATTGATAGATATTAGATGGTA TGCTCATTATTAACTGTTCTGGGGATGTCTGTCATGACTCATGATGTATGTGCCTTAGACTGGAGTTTGGTAAAGCAGTG TCTTAGTTATGTTTGGTTCTTAGTAATGTTTTAAATTCTTGTATTATTTTTCAATCATTTCAAAAGACTTGTTTGTTCTG CGGAATCTTCTCAATAACACAGCTTGTTGGTAAATTATCTTTGTGAAGCTTTCTTGGTTCAATCATTTCAATCAGATGCA TTAGCTTGGATTTGTTGTTGTGTTTTACTTCGAACCTTTATATAACTGACGTGGAAACTGCATGAAGTTTATTTTCTTAT GTATTAAAAATGAGTTGTTAATTTTTATAAACCGTTATTTGGTGACAGAAAGTTCATTTATTGATCTTGTAAGTATAATG CTATATAGCCCATAGTATGAGGTGTTTAGTACATAGTTATATCTATATTGCCAATGTTATCATGAAGAAACTGATTGAGA TGATGATGTTTTGTATCATGATAAGTTTTTGGTGCCAGTCAATTCATTAATCTAAAAATTAAAATATGAATGAGAAATTT ATCTATCTCTACCATTTTGGTGTGTTAGTTTAGTTATATTTAAAGGCCTTCTTGTTGCACTCAGCTTTGATTTATATATA CATTTTCTTGGCAGTATAACTGGGTCCTAAGTTTGAAGTTTAACCAGCCATACTTATTATTTCAATTGAAGCATTAGGCG CAATTTGAGAGTATAAAATCTATTTTCATAAATTGTTCCAGGTGGTTTTGATAAGCGGTTGAAGGAGAGTGTGGAGTACT TGGAAGAGCTTAAAAATTTAGCTGAAAGGGAAGGGGTCTCTAACCAAATAAGATTCATCACATCTTGCACTACAGCTGAA AGGAACACTCTTCTTTCAGAATGCCTATGTGTACTTTACACGCCAAAGGTATGTGAAACCTTATTATGATTCCTGAAAAT TGGTAGAAGTTGACTTAAGAGTTTTACATTAAGATCTTCGATACAGGATGAACACTTTGGCATTGTTCCTATAGAGGCAA TGGCAGCTTATAAACCTGTTATTGCGTGCAATAGTGGTGGCCCGGTGGAGTCAATCAAGAATGGTGAAACAGGATTCCTT TGCGATCCTACACCACAGAAGTTTGCTTCAGCAATGGCTAGCCTCATAAATGATCCTCAGGGAGCAGAAAGAATGGGCAG AGAAGCTAGGAGGCATGTTGTTGAGTCATTCTCTACAAAGACATTTGGCGAACGTTTAAATAGATATTTAGTTGACATTC ACCGGGAGAAGGAGGATTGAGTTTAAGATATTTTTCCCTCAAATTGTTAACTGCAATTGCTGACCATTGAAGGCACTGTA GTTAACATTTTTGCCAAAATTTCTATTTAAGATGATTTTTATTTTATACCATGTAAATTTTTACCTGAGAGGATCACATG TTCAATGTTGAGGCTTGCACTTTTGGATATTTGCAGACATTATAAATGCATTGCAAAGTTTA
CDS sequence (LotjaGi3g1v0244100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAAGGGCACAAGCTCAGAGATGAACATTGCCATTATCCACCCTGATCTTGGCATAGGTGGAGCTGAAAGATTGAT CGTTGATGCAGCTGTTGAGCTTGCATCCCATGGTCATAATGTTCATGTTTTTACTGCTCATCATGATCGAAATCGATGTT TTGAGGAAACTGTTGCTGGTACATTTCCTGTTACTGTCTATGGTTCCTTTCTTCCGCGGCATATATTCTACCGTCTTCAT GCATTGTGTGCTTACCTTCGATGCCTATTTGTTGCTTTCTGTGTGCTTTTCATGTGGCCATCATTTGATGTTATACTGGC TGATCAGGTCTCTGTAGTCATTCCCATTTTGAAGCTTAAAAGGTCAACAAAGGTTGTGTTCTACTGTCATTTTCCTGACT TGTTGCTGGCTCAGCATACAACTTTTGTTCGGAGGATGTATAGGAAACCCATAGACTATGTAGAAGAAATAACAACTGGA ATGGCTGATTTGGTACTTGTCAACAGCAACTTCACTAAATCTACTTTTGCAAATACGTTTAAGCAACTAGATGCTAAAGG AATTCGACCAGCTGTTCTATACCCAGCAGTCAATGTGGATCAGTTCAATGAACCCACTTCCTTTAGGCTGAATTTTCTTT CCATTAACCGCTTTGAGAGGAAGAAGAACATAGAGTTAGCAATTTCAGCTTTTTCTATGCTTTGCTCACCTAATGGACTT CTTAAAAATCAAGATACTACCGATGCTTCTTTGATTGTTGCAGGTGGTTTTGATAAGCGGTTGAAGGAGAGTGTGGAGTA CTTGGAAGAGCTTAAAAATTTAGCTGAAAGGGAAGGGGTCTCTAACCAAATAAGATTCATCACATCTTGCACTACAGCTG AAAGGAACACTCTTCTTTCAGAATGCCTATGTGTACTTTACACGCCAAAGATCTTCGATACAGGATGA
Protein sequence (LotjaGi3g1v0244100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKGTSSEMNIAIIHPDLGIGGAERLIVDAAVELASHGHNVHVFTAHHDRNRCFEETVAGTFPVTVYGSFLPRHIFYRLH ALCAYLRCLFVAFCVLFMWPSFDVILADQVSVVIPILKLKRSTKVVFYCHFPDLLLAQHTTFVRRMYRKPIDYVEEITTG MADLVLVNSNFTKSTFANTFKQLDAKGIRPAVLYPAVNVDQFNEPTSFRLNFLSINRFERKKNIELAISAFSMLCSPNGL LKNQDTTDASLIVAGGFDKRLKESVEYLEELKNLAEREGVSNQIRFITSCTTAERNTLLSECLCVLYTPKIFDTG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 78 | 78 | - | – | |
PANTHER | 5 | 310 | 306 | 9.8E-145 | – | |
PANTHER | 5 | 310 | 306 | 9.8E-145 | ||
Gene3D | 5 | 210 | 206 | 3.3E-15 | – | |
CDD | 9 | 309 | 301 | 2.73257E-163 | – | |
SUPERFAMILY | 11 | 308 | 298 | 1.7E-35 | – | |
Pfam | 20 | 200 | 181 | 1.5E-16 | ||
Phobius | 79 | 99 | 21 | - | – | |
TMHMM | 83 | 102 | 20 | - | – | |
Phobius | 100 | 315 | 216 | - | – | |
Gene3D | 211 | 314 | 104 | 1.5E-9 | – | |
Pfam | 212 | 307 | 96 | 1.6E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity | Catalysis of the reaction: beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP-alpha-D-mannose = alpha-D-Man-(1->3)-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP + H+. This reaction is the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->3)-D-mannosyl-D-mannose linkage. | ||
Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. |
Expression pattern of LotjaGi3g1v0244100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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