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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0315800 |
| Transcript ID | LotjaGi3g1v0315800.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ERI1 exoribonuclease 2; TAIR: AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q5HZL1|ERI2_XENLA ERI1 exoribonuclease 2; TrEMBL-Plants: tr|I1M0N0|I1M0N0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66875422..66881319) extracted from Lotus japonicus Gifu genome v1.2.
ATATATAAAAAAATCTCATCTCACAGGTAATTTCACTCTAACCCCTTTCTCTCTCCACAGCCAGGTTCTCTTCTCTTCTC TTCGCTCTTTCTCTCTCTACATTCCTCTGTTTTCTTCTTCTTCTCCGTGTTCTTTTTCTCGCGTTTTCTCTTCCGTTTTC TCATGCTTTCTCTCTGTTTGCGTGAGGGCTTTTGTGATTCTGGTTTCGGTTCGTTTTGATTTTGATTTCTTTTTGTGGCG CAGGGAGGATTTTGATTCTACTGGAGGATCTGATGTTCTCGCTCGTCGATCTCATATATATTCACGATCATGATGGCCCT TGAAAATTCAGGTTATTTTTGTTGCTTAATTGGCTTTTTTGTTTATCGTGCTGTGATTGTTTGGTTTAATTCTGGTACGA TCCTCATTGTAATGCCAATTTTTTTTGTGTGATTCGATTTTTCTTTGATTTTTGTGTTTGTTTGGGGGTACATTTTGTTG CATTTGTGTGTGTTGGTGTGTGGGGAAATTTTGGTTGTTGGGAGTACTAGGTCAGTGTGTGTTTGCTTCTGGGTGGTTCA ATTTTTGTTTGATCGCATGTTTGGTGTGGTTGGGAGCAATGTGTGTGTGAATTGGGTTTCAATGAGTTGTTCTGGACTTG GTTTGGGTCTGAATTTACTGGCTAAACTGAGGAAATTGTGGGTTTTGCATTTTTGGGACTGGGGTGGTCGATTTGGATTG TGGGAGTGGGGAGCACAAGTGGGTAGTGGCTCGGATGAAGAGTTGGGAGTTTGAGTCTGATGGATGCTGTGGAGCAGAGA TGTGAAGAATGAGTGAAAAGCATGCTAGGAGTGAACATTAGCCTGCATGGAGAAATCGGTTTATGTTTGTTCGTATTATG TTATTTTGATGCAGATTACTCTTTGGATAATGTAGTATGGGTAACAGGGTAAGGGTTTTTTTTCATGCTAGGATATCTTT TGGTTCTTGATTCTGCATTTTTGAGTATTTGAAAACTAATCATATCTCTTGAGAAGCTGAGACATATTCCAGTGTTGTTT ACAATCCACTCCTTTTGAGGAAATCTGTCCCTATATCTCCGTTTCCTCTTTGTGCAAACAGTGTTTGCAATCTCTGACCA TTTAGATGTTATATTTTCGATATTTATACTGAGGTTCATTTTGAAACTGTTTCTTTCTTTTTTGTGCAGAAAATATGCAA ATAACCTGCGAGGCATCTCTGAAATGCCTCCAGGGAAAGGGATTCCCTAGCACTTTTCAGTGTAATGGGAGTTCTATTAC AGAGCTAAAAAATGATCCTGGTACTCATCCAGCTGGGGATGTTTCTGAACCTAACCGCCGTCTTGGCAGTGAGTTTCTGG AGCCTTCCAATGAATTTCACAGTAAACCTACTTATCACCATGAGTACAACACCTGGACATCCTGCCATTTTCACTCTCCC AAAGTGCACCAATGCCCAATGAATGCTTTTGAGAGCCACTTTTATCCTTATCCTGTCGAGAACCAGCTTCAGTATGTTCC AGCTAATATGTTCGCTCAGAGTTACCCCCGGGAGCAATTTCAGGAATTTCAATATTTCGTGGTCATAGACTTCGAGGCTA CCTGTGATAAGGATAAAAATCCCCACCCTCAAGAAATAATTGAGTTCCCATCTGTCATAGTGAGTAGTGTGACTGGCCAG CTGGAAGCATGTTTCCAAACATATGTGAGGCCTACCTGCAATCAGCATCTGACTGATTTCTGCAAGGATCTGACTGGTAT CCAGCAAATTCAGGTGTGTTAAGAAAAAATCTTACCTTTTAACCATGATGAAGTGATACAAAAAAAAAAAACAGGACAAA CCATTATGTCTTTCTTCTGTGATCTTTTCAACTCTTCATTTTGTCCTTGTTATTGGACTAACAATTACATTGCTATGTGC ATATCAAATATGGTGATTTCTACAATGTTTGTAATTGTAAAAGCTAACTTCCTGGCACACCGTGAAAGTAATTTCTACAG TAGTCTATGTGCATGTTTGGTAATAAGGTCCATACACACTCCTAGGCACGTTTCATGTTAAGCTCCAACGGGTAGCTTCT AATAGACATGCATATAGGACCACTGGGACGTGGTTCCAAATGAGCTATATATCCCCATCTCATTGGCTAGTCTGATTGTC TACTCGGGAGTATTAGCAAAACAACAAGTTTGTCAAGGTTTGATTTGAGAAGAATTGTCTAATTTTTCCAAATGGGTAAT TATTTATACTGTTTACAGTAGTAATGGCTAGATGAATCATTTTCTACACTACATTAGAGCCAACCAAATGAATCTATCAG TAATGACAGCTACTCATGTGTTTAAACCTAATACTAATTATGAATGTGCTTTAGTCTAACAGATTTTAATGCTCACCCTA AGTTAGTCCATAAAGTTGACCTAAGGCCTTCAAAGGGATTTGGTGAATATTTAAGCCAACTCCTTTTTTATTTATTTAAT AGAATGAGTAGTGTTCAAAATGACAATCAATCTCTGTGTTCTGCTCTTTCATGTTACTGGGATAGACACAATTTGTACTG CAGCTTGGCTGTCTCAAATCAGTTTCATTTCCATAACATTTCCCAATTCAAGCTTGTGAAGCAACTGTTTAACCATATTA GTTCTAGACTTCTAGGTAGATATTGCCAATTGCAATAGTATTGTACTCGACCACTCACTGGATCTAGCAAGTATTTTGTG TTTTCACTCCTCATGAGATTATGTTACCTCCTACAAAAACTAAATATGCTGAAATTAAGCTTCTATCAATGGTGAACTTG CTCAACCAGCATTTGAATAACCAACAACTTCAGCTTTGCCTTTGTTTTCATAAAGTAACCCTTTACTCGGTGCACTATTG ATTTATCTCAGAATGCGGGCCACAAAGTCCCAATGACTATCTAAAACAAGGAGCCTTTAATAATTAACTTCCTACACTTA CAAAAAGAATAATATTTGATCTAGCTACTCTAAGGTAGTTGAGTTTACTGACAAGACATCTATATCTACAAGGGTTCGTC AATTGCTCCACCTAACCTGGTAGGAGTTTGACATTAGGGTTCATTTGGAGTATTACTAGGGTTGTAGTTCAACATGGCTG TTTCCTCAAGCATTTTTATAGCATACTTTGTTTGTGTGATGGCAATCCTGACATTATATTGAGCAACTGAAATCCCCAAA AAGTACTAGAGGGTCCAAATCTTTTGTTGATAGTGGTGTGACTGATGTTGCTTAAAATTCTGGTTCAAGATTTTGTTGCT AGGCTAATCATTTCTCATGACAACAATGTCATCTACATGAACAACTAGGTGAATGCATTGATCAGGTGATATAACTGAAC CTTCCAAACCAAGCATAGGATGATTGTTTTTGTCCATAGAGTAGAGGTGGCATCTGAGTTGGGCACATCATGTGCAGTAT GACCCATAGTTGTTGCTAGACCCGCTTATTGCAACTCACCATGCTGAAAGGCCTTATTAATATCTAACTAATGAAGTGGC CATTAATGAATGGTAGCCTACTAGCCTTCACAACAAAGAGGAAAAATAGTTATTTTGGCCACAAAAGAAAAAGCATTTCG ATAATTGAGGCCAAATAGTTGTGTATATCCTATGGCCACAAGTAGGGATGTCAAAATTATCCACACTTGCGGATATCCGT GGATAAAAACCCTTTATGAGTAAAATGTTCTTAGAGAGCAAACCTACACTAGTTACCTAAGAGTTAATGGCAGCCAATAC TAGCAATGCCTACGATTTACTCATTATATATGTGCTTAAACGTGCCATTTGATTCTAGCAATATCTATGTTCTGGATTAA TTATAAGAGGAATCATTTCCTAAATTGGAGCTAACCAACACTGTTTACCTAAGTGTTAAAAAGATAATACTTCTCATTAT ACACATGCTTAATCCCATCTAGTTCTAGCTATCTAGACTTTGGTCTACTTATTGAATTTTGATTAATTTGCCTGAACTTG CACTGTATTTTCTCCATGGTACGGATTTTATACTCTTTATAACAATACATTGCAGTTATGATTGTCAGAATAATGTGTAC AATATTCAGTTTGAGCATATTCTGTTTCTATTTCTTTATCCAATGTGTCAAGTAATTGAAATCTAACATTCTACTATTGG TTGGCATTGTATATAATATCAAATGATTTGAAGTGATTAATTTGAAAGTGGAAAAGTTGTGGGGAACCTGGACATTAAGT AGAAATTCATGTCAAGTGGGTCTGTAAATGGGGACATGGAGTGCACCTGTGATTGCTTCTCACACAATTTACATCCCTGC ATCTTTAGCGGCAGCCATTTGTGTGTGTGTGTGTGTGCTGTCGGATTAGATAATGAATAACCATTTTGAGATTGCCCCAG TTAAGACATGTGGTATTATAAAGGAGCTTTACTTAGGCATGGTAGGTATGGATAGATGCTTTTGCCCACATACAACCTTT GTGAGCACACCATAAGTATGATCACAAACTGACATTGGATGATAGACATATTTCTATGCTGTATCTTTTTATAACCTATC TGTAGCTAATCAAGTATTACATTTGCCTATTCATTCTTGGCTATTGGTGAAGATTGTTAACCGTATTTCTTACTATATGG TTCAGGTGGACAGAGGTGTTACTTTGAGTGAGGCTCTACTTAGGCATGACAAGTGGCTTGAGAAGAAGGGAATAAAGAAC GCCAACTTTGCTGTGGTTACATGGTCTAACTGGGATTGCCGTGTGATGCTTGAATCTGAGTGCCGATTCAAGAAAATACG AAAACCTCCTTATTTCAACCGGTAAATGTTGCATTATAGAAATGATGATCCATGTTTATCAGGATTTCGTTTCAACTAAC TTTTGTTTATCTTCTTCTTAACTTGTGCTAGCTGGATCAACTTAAGGATTCCTTTCCGTGAGGTATTTGGTGCTGTGAAG TGTAATCTGAAGGAGGCTGTTGAGATTGCTGGCTTGGCTTGGCAGGGTCGTGCTCATTGTGGCCTTGATGATGCTAAAAA TACTGCTCGCCTGCTGGCTCTGCTCATGCATAAGGGTTTCAAATTTTCCATTACCAATTCCATTATGTGGCAGACTTCTG ATCGATCACTGATGTGGAAGCAGTCTCCTGAACAAATGAGTGTTTTCCCTCATTACCCCTACAAAGCAAAGGATATGAAT ACCCCCATCGTTCAGTACCACCCTTGCTGTTTCTGTGGGGTGAAAAGCAGTAGGGGCATGATCAGGAAGCCAGGGCCCAA GCATGGGAACCTTTTCTTTGGATGTGGAAATTGGACTGCAACTAGAGGTGCCCGCTGCCATTACTTTGAATGGATTTCTG CCTAACTGAGCACCGTTTGATCTATGATCAAATCTCAAGTTTTCTTATATGTTCTATGTTAAAAAAAGGGGAAAAAATGA AAAAAATATGTGGAAATGGCTTATGAAAGTAATGGTGTTGTCTCTAGTGGAAGCTTGTCTTCCTGGCTGTGTGGTGAGGT TTCTGCTTCATGAAATGTAGAGAAAATTTGTTGTGGCTCAGTTCCTTATTACTGTGGCTGCTTAAACATCAAAGTAGTCT TTGTTAAGTTAAGGAGAGAGGGAGCTTCAACCTGTAAAGCTGACTTGTTGACTGGAGAATCATCTGGGAATGAGGATTTG GGTAGTTAGGATTGATACTTTTACATGCCAAAGCATGGTAAGTTATCTTTTAAATAATCTTGTGAAATAGGACTCTGTTT CCTTGCTCCAATGGGAATCGTTACAATTTCCTGTGGCCCTTTTCCTGCTTGTCACTTATGATAACATTTCTAACTTTACC TTGTTAACTGCCCCTGCACACTATGTTCACCAAGATCCGTTCAGGGAAGACAAAGTAG
CDS sequence (LotjaGi3g1v0315800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGCCCTTGAAAATTCAGAAAATATGCAAATAACCTGCGAGGCATCTCTGAAATGCCTCCAGGGAAAGGGATTCCC TAGCACTTTTCAGTGTAATGGGAGTTCTATTACAGAGCTAAAAAATGATCCTGGTACTCATCCAGCTGGGGATGTTTCTG AACCTAACCGCCGTCTTGGCAGTGAGTTTCTGGAGCCTTCCAATGAATTTCACAGTAAACCTACTTATCACCATGAGTAC AACACCTGGACATCCTGCCATTTTCACTCTCCCAAAGTGCACCAATGCCCAATGAATGCTTTTGAGAGCCACTTTTATCC TTATCCTGTCGAGAACCAGCTTCAGTATGTTCCAGCTAATATGTTCGCTCAGAGTTACCCCCGGGAGCAATTTCAGGAAT TTCAATATTTCGTGGTCATAGACTTCGAGGCTACCTGTGATAAGGATAAAAATCCCCACCCTCAAGAAATAATTGAGTTC CCATCTGTCATAGTGAGTAGTGTGACTGGCCAGCTGGAAGCATGTTTCCAAACATATGTGAGGCCTACCTGCAATCAGCA TCTGACTGATTTCTGCAAGGATCTGACTGGTATCCAGCAAATTCAGGTGGACAGAGGTGTTACTTTGAGTGAGGCTCTAC TTAGGCATGACAAGTGGCTTGAGAAGAAGGGAATAAAGAACGCCAACTTTGCTGTGGTTACATGGTCTAACTGGGATTGC CGTGTGATGCTTGAATCTGAGTGCCGATTCAAGAAAATACGAAAACCTCCTTATTTCAACCGCTGGATCAACTTAAGGAT TCCTTTCCGTGAGGTATTTGGTGCTGTGAAGTGTAATCTGAAGGAGGCTGTTGAGATTGCTGGCTTGGCTTGGCAGGGTC GTGCTCATTGTGGCCTTGATGATGCTAAAAATACTGCTCGCCTGCTGGCTCTGCTCATGCATAAGGGTTTCAAATTTTCC ATTACCAATTCCATTATGTGGCAGACTTCTGATCGATCACTGATGTGGAAGCAGTCTCCTGAACAAATGAGTGTTTTCCC TCATTACCCCTACAAAGCAAAGGATATGAATACCCCCATCGTTCAGTACCACCCTTGCTGTTTCTGTGGGGTGAAAAGCA GTAGGGGCATGATCAGGAAGCCAGGGCCCAAGCATGGGAACCTTTTCTTTGGATGTGGAAATTGGACTGCAACTAGAGGT GCCCGCTGCCATTACTTTGAATGGATTTCTGCCTAA
Protein sequence (LotjaGi3g1v0315800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMALENSENMQITCEASLKCLQGKGFPSTFQCNGSSITELKNDPGTHPAGDVSEPNRRLGSEFLEPSNEFHSKPTYHHEY NTWTSCHFHSPKVHQCPMNAFESHFYPYPVENQLQYVPANMFAQSYPREQFQEFQYFVVIDFEATCDKDKNPHPQEIIEF PSVIVSSVTGQLEACFQTYVRPTCNQHLTDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNANFAVVTWSNWDC RVMLESECRFKKIRKPPYFNRWINLRIPFREVFGAVKCNLKEAVEIAGLAWQGRAHCGLDDAKNTARLLALLMHKGFKFS ITNSIMWQTSDRSLMWKQSPEQMSVFPHYPYKAKDMNTPIVQYHPCCFCGVKSSRGMIRKPGPKHGNLFFGCGNWTATRG ARCHYFEWISA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 405 | 396 | 5.0E-163 | – | |
| PANTHER | 10 | 405 | 396 | 5.0E-163 | – | |
| MobiDBLite | 37 | 56 | 20 | - | – | |
| Gene3D | 127 | 352 | 226 | 1.0E-73 | ||
| SUPERFAMILY | 134 | 323 | 190 | 2.73E-34 | ||
| SMART | 136 | 318 | 183 | 2.0E-22 | ||
| CDD | 137 | 313 | 177 | 2.75467E-68 | – | |
| Pfam | 138 | 309 | 172 | 4.0E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi3g1v0315800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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