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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0337700 |
| Transcript ID | LotjaGi3g1v0337700.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alcohol dehydrogenase-like protein; TAIR: AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|I3T3D7|I3T3D7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0337700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:70964006..70966274) extracted from Lotus japonicus Gifu genome v1.2.
ATGATCAGTAGTACAGGACAGGTGGTGTGCGTGACTGGTGCTTCTGGTTATATCGCTTCATGGATCGTCAAATTTCTTCT CCAACGCGGCAACACTGTCAAGGCCACTGTTCGCGATCCAAGTCAGTGTCCTTTTATTTTTTCCTTTCTTGTTCATTTCA TCATTGTTGTTTTCTTTGTAATCCTTGTTTGCTATATTTGATTTCCCAATTAAAATTATGATTTATGGTTGATTGATTGC AGATGATCCAAAAAAAGTTGGCCACTTGCTTAGGCTTGATGGTGCTAGGGAGAGACTGCACCTATTTAAGGCAAATCTCC TTGAAGAAGGTTCCTTTAACTCTGTTGTTCAAGGCTGTCATGGTGTCTTTCACACTGCTTCTCCCTTCTATTATGATGTC GAGGACCCGCAGGTTCATCATCCCTTCTACTTTTAATTTGTAAATCCATCCATTTGTCTTTTCATATATTTATAGTTTTC TTTATGTATATTTCAGGCTGAACTGTTAGATCCAGCAGTGAAGGGAACTCTAAATGTTCTCAAATCATGTGCAAACTCGC CATCTCTGAAACGTGTTGTCCTAACCTCCTCTATTGCTGCTGTTGCATATAATGGAAAGTCTCGAACTCCGGATGTAGTG GTTGATGAGACTTGGTTTTCTGATCCGCATTTCAATCTGGAAGCAAATGTATTTGCCATTTACCCGAAAACATTTTTTTT TTCAGAGAGTGTCTACTTATATAAGATAGTCAATTCCTTGAAAGAAACCATTCGATGAATGCATGTGGATTATGGGGCAA GGCAAAATACCCTTCCAACTGAAAACTTTTCTGTTCTTTGCTTTTTGAATGCAGCTAAGGCTAAGACAATGCTATTGTAT TTGTTCCAATGTGAGCAAAGGGTAATGATTTATCATGGATATTAAGCTATCATGCTTTTTGACTTCTTTCCTTTTCCTAT TTATGCTTTTAGATGTGGTATGTGCTTTCAAAGACCTTGGCTGAAGATGCTGCCTGGAAATTTGCACGTGAAAACAACAT TGACATGGTTACTATTAACCCAGCAATGGTCATAGGGCCTCTCCTGCAACCAGTTCTTAACACCAGTGCCGCTGCAGTTT TGAATTTTGTTAATGGTAATTACTATTTAAACGTTATGCTGTACTCTTTTTTCTTTCAATTTTTCAAAATATGTCATCCA CTTTTTCTCTAATGCGTCAATGGTTATTTAGTTATTTATTTGTTATATTAATGGATATTAGCAGTTATGATGTGTTTCAA ATATATTTGTTTTCCGCATGACAAGATCTTTGGTAGATTTGGGTAAATAGCTAAATTAAGAGCTTATGACAATAAACACT TATTCATAAGCTTATCTGAAAAGCTTATGAAATAAGCACATAATAGTTTATAGGTAGGTTTAAGCGCTTATTTGTAAGTT CATCTGAGTAGCTTATAGGTAGGTCATATTATAAGCTATTTTTATAAGTTTACCCGAACTCATATAAGTACTTATGTTAT AAAATAAGCTGTTTCAAACGCAATTTTTGTCCTTTGATAATACAATGATCTCTTTCACTGCCCTGATACAGGTGCACAAA CATTTCCAAATGCTACTTTTGGATGGATCAATGTGAAAGATGTTGCAAATGCCCATATTCAGGCGTATGAGAGTGCTTCA GCTAGTGGAAGATACTGTTTAGTTGAGAGAGTGGTACACCATTCAGAAATTGTCAAGATTTTACGTGAACTGTACCCGAC ATTACAACTTCCAGAGAAGTAAGATCAATAATTTCAGTAACTTCAAGAATGCAAAAGAGTTATTTATTATATGTAAACAT ACAAATTCGGGCGGCATATAATCGACACATGCTAGCAGCAGTTTTAACCACCGCAAATGTGGTTTGCAACTACCACTAGA TGTATGTCAATTGTATGTTGCCAAAATCTGTCTGCTAATCATTTTTGTATGCAAAAATCACAGATTAATGGTTACTGTAA CATGATTCCTACATGACTCCCGTTTTGTCAATTTGTGTGTTTACATTTATATAATTAAAATAATCCAAGTTCTTCATGTT TTGATTTTCTAATACCATTTTCACTTTGTTAACAATGTTATCAGGTGCGCAGACGATAAGCCATATGTGCCAACATATCA GGTTTCCAAAGATAAGGCAAAGAGCTTGGGAATTGAATTTGTTCCTTTGGAAATGAGCCTCAGGGAAACCGTGGAAAGTT TGAAGGAGAAGAAATTCACCAACTTTTAA
CDS sequence (LotjaGi3g1v0337700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCAGTAGTACAGGACAGGTGGTGTGCGTGACTGGTGCTTCTGGTTATATCGCTTCATGGATCGTCAAATTTCTTCT CCAACGCGGCAACACTGTCAAGGCCACTGTTCGCGATCCAAATGATCCAAAAAAAGTTGGCCACTTGCTTAGGCTTGATG GTGCTAGGGAGAGACTGCACCTATTTAAGGCAAATCTCCTTGAAGAAGGTTCCTTTAACTCTGTTGTTCAAGGCTGTCAT GGTGTCTTTCACACTGCTTCTCCCTTCTATTATGATGTCGAGGACCCGCAGGCTGAACTGTTAGATCCAGCAGTGAAGGG AACTCTAAATGTTCTCAAATCATGTGCAAACTCGCCATCTCTGAAACGTGTTGTCCTAACCTCCTCTATTGCTGCTGTTG CATATAATGGAAAGTCTCGAACTCCGGATGTAGTGGTTGATGAGACTTGGTTTTCTGATCCGCATTTCAATCTGGAAGCA AATATGTGGTATGTGCTTTCAAAGACCTTGGCTGAAGATGCTGCCTGGAAATTTGCACGTGAAAACAACATTGACATGGT TACTATTAACCCAGCAATGGTCATAGGGCCTCTCCTGCAACCAGTTCTTAACACCAGTGCCGCTGCAGTTTTGAATTTTG TTAATGGTGCACAAACATTTCCAAATGCTACTTTTGGATGGATCAATGTGAAAGATGTTGCAAATGCCCATATTCAGGCG TATGAGAGTGCTTCAGCTAGTGGAAGATACTGTTTAGTTGAGAGAGTGGTACACCATTCAGAAATTGTCAAGATTTTACG TGAACTGTACCCGACATTACAACTTCCAGAGAAGTGCGCAGACGATAAGCCATATGTGCCAACATATCAGGTTTCCAAAG ATAAGGCAAAGAGCTTGGGAATTGAATTTGTTCCTTTGGAAATGAGCCTCAGGGAAACCGTGGAAAGTTTGAAGGAGAAG AAATTCACCAACTTTTAA
Protein sequence (LotjaGi3g1v0337700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISSTGQVVCVTGASGYIASWIVKFLLQRGNTVKATVRDPNDPKKVGHLLRLDGARERLHLFKANLLEEGSFNSVVQGCH GVFHTASPFYYDVEDPQAELLDPAVKGTLNVLKSCANSPSLKRVVLTSSIAAVAYNGKSRTPDVVVDETWFSDPHFNLEA NMWYVLSKTLAEDAAWKFARENNIDMVTINPAMVIGPLLQPVLNTSAAAVLNFVNGAQTFPNATFGWINVKDVANAHIQA YESASASGRYCLVERVVHHSEIVKILRELYPTLQLPEKCADDKPYVPTYQVSKDKAKSLGIEFVPLEMSLRETVESLKEK KFTNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 2 | 318 | 317 | 7.35E-66 | ||
| PANTHER | 3 | 321 | 319 | 5.8E-173 | – | |
| PANTHER | 3 | 321 | 319 | 5.8E-173 | – | |
| Gene3D | 7 | 325 | 319 | 4.4E-138 | – | |
| CDD | 9 | 300 | 292 | 2.69572E-149 | – | |
| Pfam | 9 | 244 | 236 | 1.6E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi3g1v0337700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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