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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0350300 |
| Transcript ID | LotjaGi3g1v0350300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cinnamoyl-CoA reductase; TAIR: AT1G15950.1 cinnamoyl coa reductase 1; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|I1KGT7|I1KGT7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0350300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72890443..72895222) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCCTTTATAAATGCAACCATTTCTCGATAACCAGCACATACCATCTTCTTGACTCAAGAGAGAGCACATTCATCCTT CAAATTCTCTTCTCAACCACCATTTCATTTTTTTCTCACCTGTATAATCAGAGGAAGAAATTAAAAGAATCCAAGAAGAT GCCGGCTCCTGCTGACACATCATCAGTTTCCGGCGATATCGTGTGTGTCACCGGCGCCGGCGGGTTCATTGCATCATGGC TCGTCAAACTTCTCTTGGAGAGAGGCTACATTGTCAGAGGCACCGTGCGAAACCCAGGCATGTTATATGTTATTGCTATA TATACATGGCATGGCATGCAGTGCTTATTACATGACATGTGTTTTTTCTTGCATGTTAAATTTGATTTATGTAAGGTTGT TTAGCTGAAATTTATGTTATTAATTTCAGATGATCCTAAGAATGGACACTTGAAAGAGTTGGAAGGAGCCAAGGAGAGGC TAACTCTGCATAAGGCTGATCTCTTTGATCTTGATTCTCTGAAAGCAGTCTTTCATGGTTGCGATGGTGTCTTCCACACC GCCTCCCCGGTCACTGATAACCCCGTGAGTTCTCTTTCTTTTCCCTTCAATGTTTTTTTTTTTTGAACTTTTTCCCTTCA ATGTTAAAGGATTTATTATTGGGTGTTTGAAAAATTCTATTGCCTCTCCTTGTTTCTTTAGATAATTTTTTTTTTTGAAA AATAAAGGATTGTATATTATTATCCACAAAAAACCTCTAAGGACAAACCCTTAAGGAGCAAGGAAAACCAAAAAAAAAAA AAATGAGGCATCCCGTCGAACACACAAAAAAAACCCCAAATCGCCGCAAAACCCCCATCCAGGGCAAAAGCAAGGGCACC CTAAGACTACCCAACCACACCCGAGAGAAACAAACAAAAATCAAGTTTTGAAATGTTCCTCATAAATCTTCTCCAACACT TGAATAGCTTCAAAATCGCTTTCCTCAAATTCTAACCCCAAAACTTTTCCAACTAGCCACGTGTTGGAAAAGATAATTAG TACTAGTAAAATTATTCAAGTAAATATAATATAAAATTATATTTCAACATATGCGTTAGGAAATTCTAGTTTGTCTCACG TGTTAAAATATTATTGGACTACATAAAACTATGATTATAGTGATTTTACTTTATATTTACTTGGAGTAAATTATATAAAT TTTTTAATTGGGAACTATATTTTCTAGAAACAAATTTCAATGTTCTCACACATTGCCCATATGATCAGGGTCGGCCCTGG GCCTGTGCAGGCAGACCCACAACCCAGTGCCTCCAAAAAGAAGGGGTCCAAAATAAAATTCCCATTAAACTTTTTCAAAA AAAAATTTAACAGTTGTATTCAAGATCAGTTCTGTACTTCTGAATTTAAGAGCTTAATTAGCATTGGAATATGGAAGGTT TCATTGGGTTTTTCTATCTAATTCACTAGATAAGTGGATATTAATTAGTGAACTAATCAACTTTAAAACGGCCCAGGGCC TCAAAAATGTCGGGACCGGCCTGCATATGATACGAGCAGATCTTGGGGTAGACAAGAAGCCAAGATGTCAGTGTTCATTG TTATAGACAATGAATAAAAACATGACACCACGTTAAAATAAAAATTATAAAGTCATAATTTTAAAGTTAAAAAATGCCAC GTTCTTCTCTCTTCTTTCTTTCACGCGCCATTTTCCCCTCCTCTGTAATTTTAATACTAGTAGCAGGAGCGCACGTATTA ATTATGCACCACCACCATTTCCACACAAGCAAAATAAACAGAGGCAAATCCATACACAGGGCCAATAATAACACACTACA TTAAAATAAAAATTGTCCCAATGATGTGTTATAGGACGCTAGGTTTGTGACTACAGTGAATTTAATTAGGAAGATGTGAC TAGAGAGAAGTCACATCAGATCCCTTAACAAGATTATCTCATATGATAACTAATTATATAAAGACCTAAACACTTTTACC CTAAAATTTCAACAAGTATAATCGATTGTGAAATTTTATTACATCATTTAAAAAATATTTCTTTAATTGTAATTAATTTG ATCAAAGACTATTTTGATAATTTGACTAAAAATTAAAAACTATATATTCGAAGATCTAAACATGCATTTAATCAACACGA AATTAATCTACTTTGCAAAAATCTATTAATGTTATCGCCACATTTATTTATGTTGTCTTATGCATACGACACTTTGAGTT TGTGATTTAAAAAAAATACAAACCATACTTTAAATTGTAATATGAAAACAATGCATACCGCATTTTAAATTGTGATATAT ATATATATATATATATATATATATATATATTTTGTATTAATTTTCATACAGCGTATGCATTTTTGCTAATGAGTGGCATG AATCCGTACCACATAAACAACACACTTTTATTTTATTTCCACAAGGGTTAGATTCTTAGAGACAATAGAATGGTTCAACG ATACTCTGAGTCTGAGAGACCAATTCCACCAGTTAAAAAACTCTGTTCTCTATGTCATTTTGATTCTATACATAACTGAT GACATTGCCAGGAAGAGATGTTGGAACCCGCAGTGAACGGAGCCAGGAATGTAGTCATGGCAGCTGCAGAAACAAAGGTG CAACGAGTTGTATTCACTTCATCAATTGGGACAGTATACATGGACCCCAATAGGAGCAGAGATGAGGTGGTTGATGAATC ATGCTGGAGTGATCTGGAGTACTGCAAGAATACCAAGGTTCAGTTAAATATTAATATGACTAGTAATCTTTGCATGAAAT GTGAATATTAGCATTAGTAATTAATGGATGGTTAATTAATTTGCAGAATTGGTATTGCTATGGGAAGACAGTGGCAGAGC AAGTAGCATGGGAAGCTGCAAAAGAGAAAGGAGTGGACTTGGTTGTGGTGAACCCTGTTTTGGTTATTGGACCATTACTA CAACCTACTATCAATGCAAGTACAATTCACATTCTCAAGTACCTTACTGGCTCTGCTAAAACTTATGTGAATGCAACTCA GGCTTATGTGGATGTTAAGGATGCGGCATTAGCCCATGTTCTTGTTTATGAGACTCCTTCTGCATCTGGTAGATACATTT GTGCTGAAAGTTCTCTGCACCGTGGTGAACTTGTTGAGATTCTTGCCAAGTATTTCCCTGAGTACCCAATTCCTACCAAG TAAGTGTTTGTTGTTGTCTCTATAAACTTAAAGCTAAAAATTACAGTGCACAAAAGTAATTTTTATTCGATTTACTATTA TCTTACATATTTTTATCACAATAATTTTTTTTCTGTATATCTAAACATGCCCGCTTATGTTAAGAATTTGGATCTTCTCT GGCGGCTTTCTCTATGTGCAGTTTAACTTGCAAAAGAAAATAAAAATTAAATAATTAGAGTCAAACAATTTGATAACCGG CCAATCTTTGACATGGATAGCCACATATACAGAGTACAAATATATAAATGTTAAAAACATGGTGGAGATCTAGATGAATA CAGAATGATAGGACTCTTAGTTGGTATACCAACCTTGACTTCTCTACGTGTCCAGTTTCAAACTCTGGAGACTTGGAAAG TCGAGTCAAATTGAATCAAAGCCTCCGAAAAATTCAATGATTTTATAGGCAAAGACGAGTGGAGCTTACAATTTCAAATA GTATTGTCTTTACCAAACCCCTTGTCTCCTCTCCAACACTCAGGCAACCCTGAGACATGCTTAATTGATCATCTACTAAT TTGTCTTTACCAATTTTAATTACCTAGCTACATCTATTAATTGATACAAGGGCATTCTTAATCATCTACTAATATAGTTT TAAGTGTATGTAGTTGAGTGAAAGTGACCTGTGCTGCTTTAATAAATTTCTTAATTAGCAAAACCTAGTATTTGGAAACC GACAATCCAAGACCAAAATAAACATTTATTGATGTTTAGAACTAAATTACAATTACGCTTGAAGTGTCACATTGTCTTGT AGATGAGAATTAGAGACACACTCTTTGTTATTGTTTATTTTTTGAAAAATCAACATATTTCTCGAAGAAAGAATTTGGGT TTGGGAATATCTTTCACTCTAGACTTAAACTAAACATGTTATTTCTTTTGTGCAGATGTTCAGATGAAAAGAACCCGAGA GTAAAACCCTACATATTTTCAAATCAAAAGCTGAAAGACTTGGGATTGGAATTCACCCCAGTGAAGCAGTGTTTGTATGA GACGGTTATGAATTTACAAGAGAAAGGCCACCTTCCTGTCCTCATAAACCAACAAGAGTTGATCTAAGTTAAAATTATAA TTAACAAGCTAGCTAGGCTATTTGTTTAATTAATTCAGAGCAAAGTTGTGGAATATAAAGAAATACGTAATCTGAATTTG TAATACACATCTTGCAAATTGTTGCTTTGTCCGGAAGTGGTAGTACCAATGCATTTTCCCCACTTTTTTCTAATGGTGTA CGTTTTGTCTATTCTAAGATTCTCTCGATTCCAAAGTTTGGATGTCAACGAGTATGATATAATAGTACTTAATCTTCACA TTTTTAAAGATGATTGTACTATCCCACGTTCATATTCCAGTTATTATGGTGAGGTTAAGGTCTATTTGACGCATCCAGCC ACCATGTTGGGTATTGGGAGCCGCCTAGGAAGTGGCCTCGTGATAATGAGTGCATTTGTATTTTTGTAGGTATATATTTA AATGTATTTTTAGAAAATTCATGTCTCTTATATTATTAAAAATATATTTTAAGCTAACCG
CDS sequence (LotjaGi3g1v0350300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGCTCCTGCTGACACATCATCAGTTTCCGGCGATATCGTGTGTGTCACCGGCGCCGGCGGGTTCATTGCATCATG GCTCGTCAAACTTCTCTTGGAGAGAGGCTACATTGTCAGAGGCACCGTGCGAAACCCAGATGATCCTAAGAATGGACACT TGAAAGAGTTGGAAGGAGCCAAGGAGAGGCTAACTCTGCATAAGGCTGATCTCTTTGATCTTGATTCTCTGAAAGCAGTC TTTCATGGTTGCGATGGTGTCTTCCACACCGCCTCCCCGGTCACTGATAACCCCGAAGAGATGTTGGAACCCGCAGTGAA CGGAGCCAGGAATGTAGTCATGGCAGCTGCAGAAACAAAGGTGCAACGAGTTGTATTCACTTCATCAATTGGGACAGTAT ACATGGACCCCAATAGGAGCAGAGATGAGGTGGTTGATGAATCATGCTGGAGTGATCTGGAGTACTGCAAGAATACCAAG AATTGGTATTGCTATGGGAAGACAGTGGCAGAGCAAGTAGCATGGGAAGCTGCAAAAGAGAAAGGAGTGGACTTGGTTGT GGTGAACCCTGTTTTGGTTATTGGACCATTACTACAACCTACTATCAATGCAAGTACAATTCACATTCTCAAGTACCTTA CTGGCTCTGCTAAAACTTATGTGAATGCAACTCAGGCTTATGTGGATGTTAAGGATGCGGCATTAGCCCATGTTCTTGTT TATGAGACTCCTTCTGCATCTGGTAGATACATTTGTGCTGAAAGTTCTCTGCACCGTGGTGAACTTGTTGAGATTCTTGC CAAGTATTTCCCTGAGTACCCAATTCCTACCAAATGTTCAGATGAAAAGAACCCGAGAGTAAAACCCTACATATTTTCAA ATCAAAAGCTGAAAGACTTGGGATTGGAATTCACCCCAGTGAAGCAGTGTTTGTATGAGACGGTTATGAATTTACAAGAG AAAGGCCACCTTCCTGTCCTCATAAACCAACAAGAGTTGATCTAA
Protein sequence (LotjaGi3g1v0350300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPAPADTSSVSGDIVCVTGAGGFIASWLVKLLLERGYIVRGTVRNPDDPKNGHLKELEGAKERLTLHKADLFDLDSLKAV FHGCDGVFHTASPVTDNPEEMLEPAVNGARNVVMAAAETKVQRVVFTSSIGTVYMDPNRSRDEVVDESCWSDLEYCKNTK NWYCYGKTVAEQVAWEAAKEKGVDLVVVNPVLVIGPLLQPTINASTIHILKYLTGSAKTYVNATQAYVDVKDAALAHVLV YETPSASGRYICAESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRVKPYIFSNQKLKDLGLEFTPVKQCLYETVMNLQE KGHLPVLINQQELI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 334 | 330 | 3.4E-143 | – | |
| PANTHER | 9 | 328 | 320 | 5.8E-201 | – | |
| PANTHER | 9 | 328 | 320 | 5.8E-201 | – | |
| SUPERFAMILY | 9 | 315 | 307 | 4.1E-69 | ||
| CDD | 15 | 302 | 288 | 1.05465E-171 | – | |
| Pfam | 15 | 246 | 232 | 2.1E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi3g1v0350300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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