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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0357900 |
| Transcript ID | LotjaGi3g1v0357900.7 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT1G52630.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|V7AR09|V7AR09_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0357900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:74009188..74012208) extracted from Lotus japonicus Gifu genome v1.2.
GTGAAACCCTTTTTCAGCATTCTCGTCGTCTCGCTCTCTCTCCTCTTCCTTCTCGCATTTCTATCGCCTCCTTCCCCTTT CTCCCTGAATCAGATTTCTCGGGAACCCTCACTGTAAGTTCACAATTTCACTTTCCTCCCTTCTCTTTTGGGTTTTCTCT GCCATAAAGTTTTGAACTTGGCAAATGGGCATTTTCAATATAGAACTTAGCATCTTGGGCAGTAACATTCTGTTTTTTTG TTTTTTTTTTGTTTTTTCTGGTTTCTGATCTTGTGATCTATGAATTGTTGGTGTGCAGAGGAGAGGTGGATATATGGAGT GTTCGGAGACTCATGGAATGGAGACCTTGCAATTGGTGGCTACAAGGGCCTCAAACAGGTATTTTTTGTTGCTTAATCCA ATGATACTTATTTCCACTAAATTTCAGCTTTGAAGGTTAAATTTTGTCATTTTGAATGTAATTTGCTATTTTTGGATTCA TAAAATAGCATAGGAGTCTCATAGGGAGCATAACTTCAATTTGTTGATAGTTTTTTTTATAGGCAAATGTTAGTTGTTAG TAATGTCAGTAAATTAGTCCCTCCTCAGGGTTCGAACCATGTACCCTTCATCTATCATTCCCCCCAACCCAACCCTTATG TCCCTAACTCTTAGTCACTTACCACTTGAGCTAACCCTCGGGGACAATTTGTTGATAGTAGTTTAACTTTTGGAAAATAC TTGAAATAGTAGTTTAACTTAGACAATTTGTTGATAGTAGTTTAACTTTTAGAAAATACTTGAAATGGAAGTAATTGGAA CGTTAGGCAAAGGTTTGGTGTTTCATTGATAATTGAACTTGGAAATGCAACTCGTGAATTCAAAATTTTGCTAATAAAAT TTGCAATGGATAGGATCAAGTTGGTTGAGGCCTAGGGTGAGGGTTGCTCATTGGCTTTTTATTTTCTGAATCTACCTTAA CTGGCTTTCATTGCAGACAACTGCTTTCCTTGTTTTTATTCTTGAAATGGTGCAGCTCTTCCATTAGAGACCAATGGATA TATCAGAGTGGATTGCTACGGGGGACTCAACCAGATGCGAAGAGATGTGAGTGCTTGAAGAAAACTCTTGAATTTCAACT CCAGGTCCTTAGAACATGTTTAGTGATCTTTCTTCTTCCTTTTTATTGAGATGAAATCTACAATGACTGCAGTTTTGTGA TGGTGTGGGCATTGCTCGTCTGTTAAATGCAACTCTTGTCCTGCCGAAGTTTGAAGTAGCTTCATATTGGAATGAAACAA GGTAATTCATCTTTCCATTTCTATTGCATTGTTTTTAATTTGCATTTTCAGACTGGAAATTATAATTATAGATTGGTTAG TAAATTGGGTTGTCCTGTCATCTAATGCATGCTATTCTAACTTTCATGGTTCTGTTTATCTTAATCTTGCTGAAAAAACT TTTGAATATTGGCTATTTCAGTGGTTTTGCGGATGTATATGATGTAGACTACTTCATTCAGCAGATGAATGGCTTTGTCA AAGTCATAAAAGAGTTGCCCCCTGAGATTGCATCAAAAGAACCCGTTCAAGTGGACTGTAGCAAACGGAAAGGTCAATTT GATTATGTAGAAAGCGTTCTTCCATCTCTGTTGAAACACAAATACATTTCCATCACACCAGCAATGTCCCAAAGAAGGGA CAGGTATGCTAAGCATCTCACTTCTGTCTACTACTTTGTGATAACTCATAACTCTCTCATTTTTAGTTCTAAGACCAGAA TTTAATTGCTCTTAAAACATAAACACTTTGGATATTGTTGGTTCAATAATTTCTTGCTGAATGAGCTTTTGCTTCCATAC TTTCCTTTTTTTTTTCTCTTTCCTGTATTTTGATTGGAGAATGTCACTTTAATTTGCCAGTGCACATATGATGGCTATAT TCTCAACATTTCATTGCGCGCTTATTTCTGACAGCCTTTGTCATCATCCATTATCATTTCGTCAACCATAATATGTAGTA TCTATTATTGCTATGAGCTTGTCCAAAAAGTTTCCTCTGCTGCTCATATATGATGTTTCCTGTTTAATACTTTCAAGAAT AATTCAGTTGTAACATTTGATGTCTCATACAACAAATGACTGTGCAAGCAACTTCTGTCCTCATGAAGCCAAATCACTTA AATTAAATAACAAAATGAATGTTATTCAACATCCAGAAAGAATAAACAGTTGTGAAGAATTCCCCCTTCTTCCATCCTCC CTCCTTCATTAAGAATTGTAATTGAATTTATTTCTCCTACCTTTGCAGATACCCTTTGTATGCAAAAGCTTCTCTCTGTC AAGCTTGTTACAAGGCATTACGTCTCACCAGAGTGTTGGAAATGAAAGCCTCTAAGCTTCTAGATGCAATACCTAAACCC TTTTTGTCGCTTCATCTTCGTTTTGAGCCTGACATGGTTGCATACAGCCAGTGCCAATACCCAGGCCTTTCGCCTGCTTC CATCAAAGCCATAGAAGCAGCACAAGTGGACAGAAAACCATGGACTGGTGACTTAGCCCGCATATGGAGACAGCGGGGGA AATGTCCCCTTACACCTAATGAGACAGCTTTAATACTTCAAGCTCTTTCCATCTCACCAACCACAAATATATACTTGGCT GCTGGAGATGGTTTGATGGAAATTGAAGGGTTAACAGATACTTACACGAAAATATATACCAAGTCTAGTCTTCTCAGTGG GGAAGACTTCACTAGCATGCATGGCAATACAAAAGCTGCTTTGGATTATTATATATCTATTAATAGTGATTCCTACATAG CTACATATTTTGGAAACATGGACAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGGTTGTACAAAACTATGTTTTTGAGT AGAAAAGGCTTTGCAGAATTAACTTCACGGGGTCTCAGGGGGAAGGAATTGATGCAAGCCCTATGGAAGGTTCACAGAGA TGAGTTTGTCATGGGAAGAGGCTCTGCTCTGCCCGAGTGTTTTTGCGAATTCAAGTTGTGA
CDS sequence (LotjaGi3g1v0357900.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATGGAGACCTTGCAATTGGTGGCTACAAGGGCCTCAAACAGCTCTTCCATTAGAGACCAATGGATATATCAGAGT GGATTGCTACGGGGGACTCAACCAGATGCGAAGAGATTTTTGTGATGGTGTGGGCATTGCTCGTCTGTTAAATGCAACTC TTGTCCTGCCGAAGTTTGAAGTAGCTTCATATTGGAATGAAACAAGTGGTTTTGCGGATGTATATGATGTAGACTACTTC ATTCAGCAGATGAATGGCTTTGTCAAAGTCATAAAAGAGTTGCCCCCTGAGATTGCATCAAAAGAACCCGTTCAAGTGGA CTGTAGCAAACGGAAAGGTCAATTTGATTATGTAGAAAGCGTTCTTCCATCTCTGTTGAAACACAAATACATTTCCATCA CACCAGCAATGTCCCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTTCTCTCTGTCAAGCTTGTTACAAGGCATTA CGTCTCACCAGAGTGTTGGAAATGAAAGCCTCTAAGCTTCTAGATGCAATACCTAAACCCTTTTTGTCGCTTCATCTTCG TTTTGAGCCTGACATGGTTGCATACAGCCAGTGCCAATACCCAGGCCTTTCGCCTGCTTCCATCAAAGCCATAGAAGCAG CACAAGTGGACAGAAAACCATGGACTGGTGACTTAGCCCGCATATGGAGACAGCGGGGGAAATGTCCCCTTACACCTAAT GAGACAGCTTTAATACTTCAAGCTCTTTCCATCTCACCAACCACAAATATATACTTGGCTGCTGGAGATGGTTTGATGGA AATTGAAGGGTTAACAGATACTTACACGAAAATATATACCAAGTCTAGTCTTCTCAGTGGGGAAGACTTCACTAGCATGC ATGGCAATACAAAAGCTGCTTTGGATTATTATATATCTATTAATAGTGATTCCTACATAGCTACATATTTTGGAAACATG GACAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGGTTGTACAAAACTATGTTTTTGAGTAGAAAAGGCTTTGCAGAATT AACTTCACGGGGTCTCAGGGGGAAGGAATTGATGCAAGCCCTATGGAAGGTTCACAGAGATGAGTTTGTCATGGGAAGAG GCTCTGCTCTGCCCGAGTGTTTTTGCGAATTCAAGTTGTGA
Protein sequence (LotjaGi3g1v0357900.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEWRPCNWWLQGPQTALPLETNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVASYWNETSGFADVYDVDYF IQQMNGFVKVIKELPPEIASKEPVQVDCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLYAKASLCQACYKAL RLTRVLEMKASKLLDAIPKPFLSLHLRFEPDMVAYSQCQYPGLSPASIKAIEAAQVDRKPWTGDLARIWRQRGKCPLTPN ETALILQALSISPTTNIYLAAGDGLMEIEGLTDTYTKIYTKSSLLSGEDFTSMHGNTKAALDYYISINSDSYIATYFGNM DKMVAAMRAFKGLYKTMFLSRKGFAELTSRGLRGKELMQALWKVHRDEFVMGRGSALPECFCEFKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 385 | 385 | 2.4E-105 | ||
| PANTHER | 16 | 386 | 371 | 6.1E-219 | – | |
| PANTHER | 16 | 386 | 371 | 6.1E-219 | – | |
| Pfam | 24 | 330 | 307 | 2.9E-51 | ||
| CDD | 24 | 336 | 313 | 3.3838E-120 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0357900.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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