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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0357900 |
| Transcript ID | LotjaGi3g1v0357900.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT1G52630.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|A0A072UG18|A0A072UG18_MEDTR GDP-fucose protein O-fucosyltransferase; Found in the gene: LotjaGi3g1v0357900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:74008873..74012930) extracted from Lotus japonicus Gifu genome v1.2.
TTAAAAATATTGAAAATTCATAAAAATCTAAAATACAAAGATCATTGAGTGTTATGATTTCTAATAGAGACGGTTGAGAA ATCAAGTGGGAGTTTATCGTCTCACATTGGTTAAGAATGAATGATGTAAAAACTTTATGAGAGATGTGATTCATAAACTC AATGTTAGGTAAGATGTTATGTTTAAATCTCATTAACACGGTGAAGCTAACAGGGAGGGAATGAGGATTGTCATGATGAT TGTGGTGGTAGAGAAGGTCAGAGACAAAGAGGAGGGGAAGGAAGACGACGAGGAGATCATATAACATAATGCACCAGAGA AGGTGTTGGTTTTGTTATTCGCCTTTAAGAAGATGAAATAATTTATTTCTTAGTAATAGTTAAAACTGAAAAAGTTTTTA AACAATTATTTTTTCATTCAATTGTTATTTTTGTGTAATTTTGTTGGTGTAGATTTTTTCCTTCAAATCTAGGACAATTC ACCAAAAAAATAAACAAATATTTTCTAGCTGGAAAAGAGTTGCATCTCATTTGAAAAGCAAAAATAGGAATGAATAATTA ATTGCAGAATCCTTTCAAAAAAAAAAAAAAAAAACAATTGCAGAACCAAAACATTGAATACACCTAGCAAATTTGCACTG GTTCCATCTTCATCGCAATCACAGAGAGAGAGAGAGATCATCTTCAACAACGAATCTGTGAAATCAAATGGTCGTTTTCT CTGTGAAACCCTTTTTCAGCATTCTCGTCGTCTCGCTCTCTCTCCTCTTCCTTCTCGCATTTCTATCGCCTCCTTCCCCT TTCTCCCTGAATCAGATTTCTCGGGAACCCTCACTGTAAGTTCACAATTTCACTTTCCTCCCTTCTCTTTTGGGTTTTCT CTGCCATAAAGTTTTGAACTTGGCAAATGGGCATTTTCAATATAGAACTTAGCATCTTGGGCAGTAACATTCTGTTTTTT TGTTTTTTTTTTGTTTTTTCTGGTTTCTGATCTTGTGATCTATGAATTGTTGGTGTGCAGAGGAGAGGTGGATATATGGA GTGTTCGGAGACTCATGGAATGGAGACCTTGCAATTGGTGGCTACAAGGGCCTCAAACAGGTATTTTTTGTTGCTTAATC CAATGATACTTATTTCCACTAAATTTCAGCTTTGAAGGTTAAATTTTGTCATTTTGAATGTAATTTGCTATTTTTGGATT CATAAAATAGCATAGGAGTCTCATAGGGAGCATAACTTCAATTTGTTGATAGTTTTTTTTATAGGCAAATGTTAGTTGTT AGTAATGTCAGTAAATTAGTCCCTCCTCAGGGTTCGAACCATGTACCCTTCATCTATCATTCCCCCCAACCCAACCCTTA TGTCCCTAACTCTTAGTCACTTACCACTTGAGCTAACCCTCGGGGACAATTTGTTGATAGTAGTTTAACTTTTGGAAAAT ACTTGAAATAGTAGTTTAACTTAGACAATTTGTTGATAGTAGTTTAACTTTTAGAAAATACTTGAAATGGAAGTAATTGG AACGTTAGGCAAAGGTTTGGTGTTTCATTGATAATTGAACTTGGAAATGCAACTCGTGAATTCAAAATTTTGCTAATAAA ATTTGCAATGGATAGGATCAAGTTGGTTGAGGCCTAGGGTGAGGGTTGCTCATTGGCTTTTTATTTTCTGAATCTACCTT AACTGGCTTTCATTGCAGACAACTGCTTTCCTTGTTTTTATTCTTGAAATGGTGCAGCTCTTCCATTAGAGACCAATGGA TATATCAGAGTGGATTGCTACGGGGGACTCAACCAGATGCGAAGAGATGTGAGTGCTTGAAGAAAACTCTTGAATTTCAA CTCCAGGTCCTTAGAACATGTTTAGTGATCTTTCTTCTTCCTTTTTATTGAGATGAAATCTACAATGACTGCAGTTTTGT GATGGTGTGGGCATTGCTCGTCTGTTAAATGCAACTCTTGTCCTGCCGAAGTTTGAAGTAGCTTCATATTGGAATGAAAC AAGGTAATTCATCTTTCCATTTCTATTGCATTGTTTTTAATTTGCATTTTCAGACTGGAAATTATAATTATAGATTGGTT AGTAAATTGGGTTGTCCTGTCATCTAATGCATGCTATTCTAACTTTCATGGTTCTGTTTATCTTAATCTTGCTGAAAAAA CTTTTGAATATTGGCTATTTCAGTGGTTTTGCGGATGTATATGATGTAGACTACTTCATTCAGCAGATGAATGGCTTTGT CAAAGTCATAAAAGAGTTGCCCCCTGAGATTGCATCAAAAGAACCCGTTCAAGTGGACTGTAGCAAACGGAAAGGTCAAT TTGATTATGTAGAAAGCGTTCTTCCATCTCTGTTGAAACACAAATACATTTCCATCACACCAGCAATGTCCCAAAGAAGG GACAGGTATGCTAAGCATCTCACTTCTGTCTACTACTTTGTGATAACTCATAACTCTCTCATTTTTAGTTCTAAGACCAG AATTTAATTGCTCTTAAAACATAAACACTTTGGATATTGTTGGTTCAATAATTTCTTGCTGAATGAGCTTTTGCTTCCAT ACTTTCCTTTTTTTTTTCTCTTTCCTGTATTTTGATTGGAGAATGTCACTTTAATTTGCCAGTGCACATATGATGGCTAT ATTCTCAACATTTCATTGCGCGCTTATTTCTGACAGCCTTTGTCATCATCCATTATCATTTCGTCAACCATAATATGTAG TATCTATTATTGCTATGAGCTTGTCCAAAAAGTTTCCTCTGCTGCTCATATATGATGTTTCCTGTTTAATACTTTCAAGA ATAATTCAGTTGTAACATTTGATGTCTCATACAACAAATGACTGTGCAAGCAACTTCTGTCCTCATGAAGCCAAATCACT TAAATTAAATAACAAAATGAATGTTATTCAACATCCAGAAAGAATAAACAGTTGTGAAGAATTCCCCCTTCTTCCATCCT CCCTCCTTCATTAAGAATTGTAATTGAATTTATTTCTCCTACCTTTGCAGATACCCTTTGTATGCAAAAGCTTCTCTCTG TCAAGCTTGTTACAAGGCATTACGTCTCACCAGAGTGTTGGAAATGAAAGCCTCTAAGCTTCTAGATGCAATACCTAAAC CCTTTTTGTCGCTTCATCTTCGTTTTGAGCCTGACATGGTTGCATACAGCCAGTGCCAATACCCAGGCCTTTCGCCTGCT TCCATCAAAGCCATAGAAGCAGCACAAGTGGACAGAAAACCATGGACTGGTGACTTAGCCCGCATATGGAGACAGCGGGG GAAATGTCCCCTTACACCTAATGAGACAGCTTTAATACTTCAAGCTCTTTCCATCTCACCAACCACAAATATATACTTGG CTGCTGGAGATGGTTTGATGGAAATTGAAGGGTTAACAGATACTTACACGAAAATATATACCAAGTCTAGTCTTCTCAGT GGGGAAGACTTCACTAGCATGCATGGCAATACAAAAGCTGCTTTGGATTATTATATATCTATTAATAGTGATTCCTACAT AGCTACATATTTTGGAAACATGGACAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGGTTGTACAAAACTATGTTTTTGA GTAGAAAAGGCTTTGCAGAATTAACTTCACGGGGTCTCAGGGGGAAGGAATTGATGCAAGCCCTATGGAAGGTTCACAGA GATGAGTTTGTCATGGGAAGAGGCTCTGCTCTGCCCGAGTGTTTTTGCGAATTCAAGTTGTGATTTTGAATCTAAGATTC ACCACTTTTTACTGCTTCTTATTGATTTAATTTTTATGGCATGTAAAGTGCTAGTGTATCACTTATCTAGAAGGCTTTCC TTAGCTACTGTCAGCTTGTTTATTCTTTTGTATTGATGTAACGGTTTGTTTATTTGATCCTATATCTAATGAATGTTGGC ATACATTTAGTGTATGGACAAGAATGGTCTTACAAATAGAAATACCCCTTGTTATTAACCAAGTTTTGACCGACATAAAA GAATTTACTTAGTTTTTTATACTTTGTTCGAGTGAAGCAGTTAGGAGTGTAAGATCAA
CDS sequence (LotjaGi3g1v0357900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCGTTTTCTCTGTGAAACCCTTTTTCAGCATTCTCGTCGTCTCGCTCTCTCTCCTCTTCCTTCTCGCATTTCTATC GCCTCCTTCCCCTTTCTCCCTGAATCAGATTTCTCGGGAACCCTCACTAGGAGAGGTGGATATATGGAGTGTTCGGAGAC TCATGGAATGGAGACCTTGCAATTGGTGGCTACAAGGGCCTCAAACAGCTCTTCCATTAGAGACCAATGGATATATCAGA GTGGATTGCTACGGGGGACTCAACCAGATGCGAAGAGATTTTTGTGATGGTGTGGGCATTGCTCGTCTGTTAAATGCAAC TCTTGTCCTGCCGAAGTTTGAAGTAGCTTCATATTGGAATGAAACAAGTGGTTTTGCGGATGTATATGATGTAGACTACT TCATTCAGCAGATGAATGGCTTTGTCAAAGTCATAAAAGAGTTGCCCCCTGAGATTGCATCAAAAGAACCCGTTCAAGTG GACTGTAGCAAACGGAAAGGTCAATTTGATTATGTAGAAAGCGTTCTTCCATCTCTGTTGAAACACAAATACATTTCCAT CACACCAGCAATGTCCCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTTCTCTCTGTCAAGCTTGTTACAAGGCAT TACGTCTCACCAGAGTGTTGGAAATGAAAGCCTCTAAGCTTCTAGATGCAATACCTAAACCCTTTTTGTCGCTTCATCTT CGTTTTGAGCCTGACATGGTTGCATACAGCCAGTGCCAATACCCAGGCCTTTCGCCTGCTTCCATCAAAGCCATAGAAGC AGCACAAGTGGACAGAAAACCATGGACTGGTGACTTAGCCCGCATATGGAGACAGCGGGGGAAATGTCCCCTTACACCTA ATGAGACAGCTTTAATACTTCAAGCTCTTTCCATCTCACCAACCACAAATATATACTTGGCTGCTGGAGATGGTTTGATG GAAATTGAAGGGTTAACAGATACTTACACGAAAATATATACCAAGTCTAGTCTTCTCAGTGGGGAAGACTTCACTAGCAT GCATGGCAATACAAAAGCTGCTTTGGATTATTATATATCTATTAATAGTGATTCCTACATAGCTACATATTTTGGAAACA TGGACAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGGTTGTACAAAACTATGTTTTTGAGTAGAAAAGGCTTTGCAGAA TTAACTTCACGGGGTCTCAGGGGGAAGGAATTGATGCAAGCCCTATGGAAGGTTCACAGAGATGAGTTTGTCATGGGAAG AGGCTCTGCTCTGCCCGAGTGTTTTTGCGAATTCAAGTTGTGA
Protein sequence (LotjaGi3g1v0357900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVFSVKPFFSILVVSLSLLFLLAFLSPPSPFSLNQISREPSLGEVDIWSVRRLMEWRPCNWWLQGPQTALPLETNGYIR VDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVASYWNETSGFADVYDVDYFIQQMNGFVKVIKELPPEIASKEPVQV DCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLYAKASLCQACYKALRLTRVLEMKASKLLDAIPKPFLSLHL RFEPDMVAYSQCQYPGLSPASIKAIEAAQVDRKPWTGDLARIWRQRGKCPLTPNETALILQALSISPTTNIYLAAGDGLM EIEGLTDTYTKIYTKSSLLSGEDFTSMHGNTKAALDYYISINSDSYIATYFGNMDKMVAAMRAFKGLYKTMFLSRKGFAE LTSRGLRGKELMQALWKVHRDEFVMGRGSALPECFCEFKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| PIRSF | 3 | 439 | 437 | 2.4E-107 | ||
| TMHMM | 9 | 26 | 18 | - | – | |
| Phobius | 10 | 22 | 13 | - | – | |
| Phobius | 23 | 26 | 4 | - | – | |
| Phobius | 27 | 440 | 414 | - | – | |
| PANTHER | 48 | 440 | 393 | 8.2E-220 | – | |
| PANTHER | 48 | 440 | 393 | 8.2E-220 | – | |
| Pfam | 78 | 384 | 307 | 4.4E-51 | ||
| CDD | 78 | 390 | 313 | 5.02213E-119 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0357900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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