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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0420700 |
Transcript ID | LotjaGi3g1v0420700.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Glycylpeptide N-tetradecanoyltransferase; TAIR: AT5G57020.1 myristoyl-CoA:protein N-myristoyltransferase; Swiss-Prot: sp|Q9LTR9|NMT1_ARATH Glycylpeptide N-tetradecanoyltransferase 1; TrEMBL-Plants: tr|A0A072UXN8|A0A072UXN8_MEDTR Glycylpeptide N-tetradecanoyltransferase; Found in the gene: LotjaGi3g1v0420700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82934509..82935906) extracted from Lotus japonicus Gifu genome v1.2.
GAGTTAAGGGAATATTTTGCTTTCTTCTATCTAGTCTGTTCATTGAAAAGTATCTATTTTGTCTTCCAGATTACTTTTCT GAAATCATTTCAAATGGCTGATAGCAATGCTTCCTCTGGGTCACCTGAAGAAACTCAAAATCCCAACCCAGATGGGAATG CACCTGCTGAGAGTGATCTTGCATTGGATAGTCTAGCACAAAAAGTTCAAGAATCTCTCTCTTTGGAAAAAAAACATAAA TTTTGGGAAACCCAACCTGTTGGGCAGTTCAAGGATTTAGGAGACACCAGTTTGCCAGAAGGTCCTATTGAGCCTCCAAC CCCCTTATCTGAGGTCAAACAGGAACCGTACAACCTTCCCAACCTCTATGAATGGTTTACTTGTGACATCAACTCTGAGC AGATTTGTGATGAGGTATACAACCTTCTTGCCAATAATTATGTTGAAGATTATGAGAATATGTTTAGATTTAACTATTCA AAGGAGTTTCTGCGCTGGGCACTCCAACCTCCTGGGTATTTCAAGAGTTGGCATATTGGTGTCCGTGTTAAAAGTTCCAA GAAGATGGTTGCCTTTATAACAGGTATTCCTTCTAGAATTCGAGTCCGTGATGAGGTTGTTAATATGGCTGAGATTAATT TTCTGTGTGTTCATAAGAAGCTTCGAACAAAGAGGCTTGCTCCTGTCATGATCAAAGAGGTGACCAGGAGGGTGCACTTG GAGAATATGTGGCAGGCAGCCTACACTGCTGGAGTGGTTCTTCCTACACCTATAGCAAATTGTCAATACTGGCACAGATC TCTGAATCCCAAGAAGCTAATTGATGTTGGTTTCTCTAGGCTTGGTGCGCGGATGACAATGAGTCGAACCATCAAGCTTT ATAAGCTACCAGAATCAACAGTCACCCCAGGGTTTAGAAAGATGGAAATTCATGATGTTCCTGCAGTAACAAGGCTAATT AGGAATTACTTGAGCTCTTTTGTTGTTGCGCCTGATTTTGATGAAAATGATGTGGAGCACTGGCTTCTTCCAAGGGAGAA TGTTGTTGATAGTTATCTGGTTGAAAGTCCTGAAACTCATGAGGTCACTGACTTTTGTAGTTTTTACACACTTCCTTCTA CCATCCTTGGCAACCAAAATTATTCAGTCTTGAAAGCAGCGTATTCGTTTTATAATGTTTCGACAGCTACCCCTTTGCTT CAGCTGATGAATGATGCCCTAATTGTAGCAAAGCAGAAGGATTTTGATGTTTTCAATGCATTGGATGTCATGCAGAATGA AACCTTCTTGAAGGAACTTAAGTTTGGACCAGGTGATGGGAAACTTCATTATTATCTTTACAACTACCGAATTAAGCAGG AATTGAAGCCGTCAGAGCTTGGGCTTGTGCTTCTGTAG
CDS sequence (LotjaGi3g1v0420700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGATAGCAATGCTTCCTCTGGGTCACCTGAAGAAACTCAAAATCCCAACCCAGATGGGAATGCACCTGCTGAGAG TGATCTTGCATTGGATAGTCTAGCACAAAAAGTTCAAGAATCTCTCTCTTTGGAAAAAAAACATAAATTTTGGGAAACCC AACCTGTTGGGCAGTTCAAGGATTTAGGAGACACCAGTTTGCCAGAAGGTCCTATTGAGCCTCCAACCCCCTTATCTGAG GTCAAACAGGAACCGTACAACCTTCCCAACCTCTATGAATGGTTTACTTGTGACATCAACTCTGAGCAGATTTGTGATGA GGTATACAACCTTCTTGCCAATAATTATGTTGAAGATTATGAGAATATGTTTAGATTTAACTATTCAAAGGAGTTTCTGC GCTGGGCACTCCAACCTCCTGGGTATTTCAAGAGTTGGCATATTGGTGTCCGTGTTAAAAGTTCCAAGAAGATGGTTGCC TTTATAACAGGTATTCCTTCTAGAATTCGAGTCCGTGATGAGGTTGTTAATATGGCTGAGATTAATTTTCTGTGTGTTCA TAAGAAGCTTCGAACAAAGAGGCTTGCTCCTGTCATGATCAAAGAGGTGACCAGGAGGGTGCACTTGGAGAATATGTGGC AGGCAGCCTACACTGCTGGAGTGGTTCTTCCTACACCTATAGCAAATTGTCAATACTGGCACAGATCTCTGAATCCCAAG AAGCTAATTGATGTTGGTTTCTCTAGGCTTGGTGCGCGGATGACAATGAGTCGAACCATCAAGCTTTATAAGCTACCAGA ATCAACAGTCACCCCAGGGTTTAGAAAGATGGAAATTCATGATGTTCCTGCAGTAACAAGGCTAATTAGGAATTACTTGA GCTCTTTTGTTGTTGCGCCTGATTTTGATGAAAATGATGTGGAGCACTGGCTTCTTCCAAGGGAGAATGTTGTTGATAGT TATCTGGTTGAAAGTCCTGAAACTCATGAGGTCACTGACTTTTGTAGTTTTTACACACTTCCTTCTACCATCCTTGGCAA CCAAAATTATTCAGTCTTGAAAGCAGCGTATTCGTTTTATAATGTTTCGACAGCTACCCCTTTGCTTCAGCTGATGAATG ATGCCCTAATTGTAGCAAAGCAGAAGGATTTTGATGTTTTCAATGCATTGGATGTCATGCAGAATGAAACCTTCTTGAAG GAACTTAAGTTTGGACCAGGTGATGGGAAACTTCATTATTATCTTTACAACTACCGAATTAAGCAGGAATTGAAGCCGTC AGAGCTTGGGCTTGTGCTTCTGTAG
Protein sequence (LotjaGi3g1v0420700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADSNASSGSPEETQNPNPDGNAPAESDLALDSLAQKVQESLSLEKKHKFWETQPVGQFKDLGDTSLPEGPIEPPTPLSE VKQEPYNLPNLYEWFTCDINSEQICDEVYNLLANNYVEDYENMFRFNYSKEFLRWALQPPGYFKSWHIGVRVKSSKKMVA FITGIPSRIRVRDEVVNMAEINFLCVHKKLRTKRLAPVMIKEVTRRVHLENMWQAAYTAGVVLPTPIANCQYWHRSLNPK KLIDVGFSRLGARMTMSRTIKLYKLPESTVTPGFRKMEIHDVPAVTRLIRNYLSSFVVAPDFDENDVEHWLLPRENVVDS YLVESPETHEVTDFCSFYTLPSTILGNQNYSVLKAAYSFYNVSTATPLLQLMNDALIVAKQKDFDVFNALDVMQNETFLK ELKFGPGDGKLHYYLYNYRIKQELKPSELGLVLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 22 | 22 | - | – | |
MobiDBLite | 1 | 28 | 28 | - | – | |
PIRSF | 7 | 434 | 428 | 1.3E-192 | ||
PANTHER | 12 | 434 | 423 | 1.9E-263 | ||
PANTHER | 12 | 434 | 423 | 1.9E-263 | – | |
Gene3D | 45 | 434 | 390 | 1.8E-184 | – | |
SUPERFAMILY | 46 | 231 | 186 | 1.79E-79 | ||
MobiDBLite | 59 | 81 | 23 | - | – | |
Pfam | 71 | 230 | 160 | 5.0E-76 | ||
ProSitePatterns | 180 | 188 | 9 | - | ||
SUPERFAMILY | 232 | 434 | 203 | 1.15E-84 | ||
Pfam | 244 | 426 | 183 | 7.6E-80 | ||
ProSitePatterns | 403 | 409 | 7 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Glycylpeptide N-tetradecanoyltransferase activity | Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide. | ||
Biological process | N-terminal protein myristoylation | The covalent attachment of a myristoyl group to the N-terminal amino acid residue of a protein. |
Expression pattern of LotjaGi3g1v0420700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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