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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0474600 |
| Transcript ID | LotjaGi3g1v0474600.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrilase, putative; TAIR: AT5G22300.1 nitrilase 4; Swiss-Prot: sp|Q5QGZ8|NRL4A_LUPAN Bifunctional nitrilase/nitrile hydratase NIT4A; TrEMBL-Plants: tr|I3SLY0|I3SLY0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0474600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89111145..89113564) extracted from Lotus japonicus Gifu genome v1.2.
GTAAAAGTTTTATGTATATGGACGCCAAGGTGCTGCGGCAAAGTAAGCTTAGCCTTTCTCCGGTCAGCTGATATAGACCT CCCCCATTGGCACTGAGTTTTTAATACAATTTTGTACATTTTTTTACCTGCATTTTCATCTTCATACCAAACCCGTCCTA TGTATCAATTTGATGTCACCTTAAAATTGGAAGGGAAGAATCTCGGAATGATTTTTTCTTGTTAAGATTTTTCACCCCTA AATCTTTCACTCTTTGATTCTAAAATATCTTAGTTGTTGTGGGCACACATTTTCCATTAACATGTCTTGTATTGTTATAG GCCCTGAAGTGGATAGATTGGCTGCAATGGCAGGGAAGTATAAAGTACATTTAGTGATGGGTGTGATAGAGAGGGATGGC TACACACTTTACTGCTCAGTTCTCTTCTTTGATTCTCAGGGTCATTATCTAGGAAAGCACAGGAAATTGATGCCAACGGC AATGGAAAGGGTTGTGTGGGGATTTGGTGATGGATCAACCATTCCAGTGTTTGAAACTCCTGTAGGAAAAATAGGTGCTG TCATTTGTTGGGAGAACAGGATGCCGCTTTTAAGAACAGCAATGTATGCGAAAGGTTAGATTGGATTTTTCATCTTCTAA TCACATGCTATGACGTGACCAATATTACATAATAGTAGTACCATGTTTGGAACAGTTTTTTTTTCCTCAGAATCAATTGT GGCATCAAGAAGCTTCAAACAAACTTTTTGCCAAATTGATTTTGGATTTAGAATCAATTATAGAAGGAAACATGCACTTA GAAATTGTTTATGCTTGTAAAACAACTAGCCTAACTACCAGCATCTTGTTTTGTTTTGCTAAATCTATGGAGCATAGGTG TGGAGATATATTGTGCACCTACAGCTGATGCCAGGGAAGTGTGGCAAGCATCAATGACCCATATTGCTCTTGAAGGTGGA TGTTTTGTTTTGTCTGCGAACCAGTTCTGCAGGAGGAAGGATTATCCACCCCCTCCAGAGTATGTTTTCGCAGGCACGGA AGAGGACCTAACACCAGATTCTGTTGTGTGTGCTGGTGGTAGTGTCATTATATCACCATTGGGTAATGTTCTGGCTGGAC CGAATTATGAGGGGGAGGCACTCATTTCAGCAGACCTAGGTATGTCATGCTTGTCTGATATTTACACTTGCTGCTTGGTC TGTGTTATAATAGAGCATTACTTCCTTTAATGATCTCCATAAGCAAGTAAGCACAGATTGTTATGCAGCAAGTCTCTGGT TCCCCGTGCCAGACTTGCTTCAAATTTAGCGGGCTGTTACAGGATTTGGATATATGATTCTAAGTGTGTTTTAGGATTTT TGTTAGGTTGGTAATCTTAGTAGGAGCACTGGACTAGTTCTAGGCTATGTTTGGACATCGATTGATATCAGCTTAAATGA ACGTCAGCAAGCACTTCAAAACAAAAAGTGGACGAAACACTTGTTAGAAATTGAGATGAAGTCAGTTCACGTTACACTTA ACTGGTATCTAAAGTCTAAATACACACTTTGAGTAGGACAGTGCTTATATTTTACCTAGTAGATTAGTTTATTACACATA CATATAATATGTTCAATTTTTTGTGGGAAATATCTTCAACTCTGATAATATCAAGACTAGTTAGTTTTTTCACTTTTCCT CCTTTTTTATTTAACCTTGTAGAACACAATTTCTACTGGGCCAAATATAGATTGTATCCATGTTAGAAAACTTTAAAATA ATATTTAAAGGGGTTGTCTAACATACTCCACGGGTTATAATCTCATCCTTGATGGACCATTAGTGTTATTTATACAAATT GGGAAAATTCTCAGGTTGTGGTCTTCATTCTTTCTTTAGTGTTCTGATTTCTGAAGTCCAGTTTAGTTAACCATTATAAA GATAGTTCTTCTTGAATAGAAGAGAAAAAACTTCATACTTGGAAACCTGCAGGGATCTTATATTTCATAAGAAAAGAGCT AAAATGACATGAAAATTGTCAGCCAAACTAATGGAACTCATTGAGGTTGTTTTTTATAAGCTCAGAAAATTATGAAGCAA TGTGATTCTATTTGTGTTTAAACTTTAGGAGACCAAATTGAACTGTTATCACATTAGATGGGACTAAGAATATGTCTCTA GGGCTTTCATGAAGGTCCTTTATTATAGATTGTTTTCCTTGTCTTCCATTATCAATTGATTTTGCCATTAGTTGAATGTT GCACTCTGATTCTTGAAAAAATTCACAGATCTTGGAGAAATAGCAAGAGCTAAGTTCGATTTTGATGTGGTTGGACACTA TTCAAGGCCTGAAGTGCTTAGCTTGAGTGTGAAGGACCATCCAACAAACCCAGTTACTTTTGCATCAACTTCAACAAAAG TTGAAGACAAAACCAAGTAG
CDS sequence (LotjaGi3g1v0474600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGGAAGTATAAAGTACATTTAGTGATGGGTGTGATAGAGAGGGATGGCTACACACTTTACTGCTCAGTTCTCTT CTTTGATTCTCAGGGTCATTATCTAGGAAAGCACAGGAAATTGATGCCAACGGCAATGGAAAGGGTTGTGTGGGGATTTG GTGATGGATCAACCATTCCAGTGTTTGAAACTCCTGTAGGAAAAATAGGTGCTGTCATTTGTTGGGAGAACAGGATGCCG CTTTTAAGAACAGCAATGTATGCGAAAGGTGTGGAGATATATTGTGCACCTACAGCTGATGCCAGGGAAGTGTGGCAAGC ATCAATGACCCATATTGCTCTTGAAGGTGGATGTTTTGTTTTGTCTGCGAACCAGTTCTGCAGGAGGAAGGATTATCCAC CCCCTCCAGAGTATGTTTTCGCAGGCACGGAAGAGGACCTAACACCAGATTCTGTTGTGTGTGCTGGTGGTAGTGTCATT ATATCACCATTGGGTAATGTTCTGGCTGGACCGAATTATGAGGGGGAGGCACTCATTTCAGCAGACCTAGATCTTGGAGA AATAGCAAGAGCTAAGTTCGATTTTGATGTGGTTGGACACTATTCAAGGCCTGAAGTGCTTAGCTTGAGTGTGAAGGACC ATCCAACAAACCCAGTTACTTTTGCATCAACTTCAACAAAAGTTGAAGACAAAACCAAGTAG
Protein sequence (LotjaGi3g1v0474600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGKYKVHLVMGVIERDGYTLYCSVLFFDSQGHYLGKHRKLMPTAMERVVWGFGDGSTIPVFETPVGKIGAVICWENRMP LLRTAMYAKGVEIYCAPTADAREVWQASMTHIALEGGCFVLSANQFCRRKDYPPPPEYVFAGTEEDLTPDSVVCAGGSVI ISPLGNVLAGPNYEGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLSVKDHPTNPVTFASTSTKVEDKTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 232 | 232 | 1.7E-136 | – | |
| PANTHER | 1 | 232 | 232 | 1.7E-136 | – | |
| ProSiteProfiles | 1 | 185 | 185 | 40.194 | ||
| Pfam | 1 | 192 | 192 | 2.8E-49 | ||
| Gene3D | 1 | 197 | 197 | 1.2E-74 | ||
| SUPERFAMILY | 1 | 211 | 211 | 3.53E-58 | ||
| CDD | 2 | 211 | 210 | 9.71478E-120 | – | |
| ProSitePatterns | 70 | 83 | 14 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds. |
Expression pattern of LotjaGi3g1v0474600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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