Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0477400 |
Transcript ID | LotjaGi3g1v0477400.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | transcription factor-like protein; TAIR: AT1G08320.1 bZIP transcription factor family protein; Swiss-Prot: sp|Q93XM6|TGA9_ARATH Transcription factor TGA9; TrEMBL-Plants: tr|A0A151TNY7|A0A151TNY7_CAJCA TGACG-sequence-specific DNA-binding protein TGA-2.1; Found in the gene: LotjaGi3g1v0477400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89376300..89384893) extracted from Lotus japonicus Gifu genome v1.2.
AGTGATTCTCATCAATAAGAATCTCAAGTGGAATGAGACAAGTTTGTTAATTGCTAGTACAAGATTTGAGAGTACCACAG AGTGAGTTTCTCAATCTGAAGTATTTACAACTAAGGACATTGATAAAGCAAGCCAAACACACCTATCAATCAGGTTTCTT ACTAGAGAAGGAGGCAAAGAAAGATAGTGACACCCTATAAAATCTAAAGTTTTGCAAAGAGGAACTTGTATGAGAAAAAG GCCGGACCCTCTTGTGGCAACTTATATATTACTTTGAAAACACAGCTTTGATCTTTCTCTGCTGTGTGAACTTTTCCACA TACCTATTTGTCCTTAGAATTTCCAAATAAAACAGTGGTGAAGACAAGGGATTCTAAATAGGTGTGTATATATATATGGA CACACACACACAAGCAATTTTAATATTCTTATGGTAATCAAGTTTTGTTTGTGAGTTGAGTTTCTGGCAAATGAGAACCT TTCAGTTTTAGCTACAGGGGAAGAAGAGAATGGTCTGAATAGTCTTGCATGGCGAGCCAAACAATCGGAGAAACCGGTTT GTCTGAGTCAGGGCCTTCAACTCACCATGTTCCTTATGGAGTTCTTCATGGGATAACTACCTCTGCATCAGGATTAATGT ATTCTTCAACTATTTCTCCATCTCATAGCTTTTAACTTGAAAAATTATTAATTCTAAAGCCAGACTCAATTATAAATAGA AGTTTCTTCGAGTTGATTATGATGAAAAAGAAGTTGATCTAGTAATTGAATTCCTAAGAAGGAATTGATATATGGATGTT TCTTCATTTTTATAAATTTGCTTCTTAATTTCCATTCCACATAATATATATCTGACTTGGATTTTGATGTTTTTTTTCTT TAGTAATCAAGGGGAAGCTTTTGATTTTGGAGAGCTTGAAGAGGCAATTGTTCTCCAAGGATTTAAGATTAGAAATGATG AAGCCAAAGCAAGTAAGTTCTTTTCCATTTCCATGGCTTTAACTTTTTCTGACATTAGATAAGCATAACTAACTCTTCTC AAAAAGGTAGAGAAAGGAAAGAGTGAAGTTTGAATATGTCTAAAGTGCTGAGTGGGGGGAGTTACCATTTTAGGTACCAT AATGATTCTAAGGCAATACACTTAGATGGCATGGGGTTACAATCTTGGAAACATGATGACTTTCCCTTGCATGATTTTGC TGACTCCATGGATGTTGAAAAAGGAGGATTAGGTTCCTTCCACCTTTTGATATAATTGTGAATCATAAAGCCTTTAAATT TTTGTGATCTTCTGAGATTTTCCATTTTGTGATTGTTGTTACAGCTTTGTTCACAGGCAGGCCTGCAGCTACACTGGAAA TGTTCCCTTCATGGCCAATGAGATTCCAACAAACAACACCAAGAGTAGTAGCCTCTCTCAGTTCTCCATCTTTGACCAAT CCATATGTAAAGATTCTTAGAACTTAGCAATATCACTAGTTCAATCAAATTCCAATCCCTTTTTCTACCTTCCATTTTGA TAAGGATATATATGAATTTTCCCAATTCAAAACTTCATTTTCAAAAACTGTAGATGAGTTTATTGCATGTGTGGGCCAAC TTCTCTTTACTCAGAATCAATTCTGAAACATGAAATCTATAACAGAAGCTTCTACCTAGAGTTGATTCTGTATTTATAAT TAATTGTATAAGGATTTTCAAACAGCCACTAAATCAAAGAATTTGGTGGGTTTTCAAACACAGGGAAGTTCAAAGTCAGG AGGGGAAAGCACTGAATCAGGATCAGGAATGAACACTCTTTCAACCAAAACTGAGCTTCAGTTTGAAACAGACTCTCCTA CAAGTATAAAGGCATCTTCTTCAGACCATCATCATGCTTTTGATCAGCATCACCTGCAGCTTCAACAGCAAAAACAACAC CAACTTCAACATGAGAAGACTACTGATCATGATGCCTCAAAAGCTGACCCACCACAGAATCAACCAGCAGCAAAATCAGC TCAGGAAAAGGTGTTCTTAAACAAACATTTTTTTTCTACTGTTAATCTCTAAATTCTATCTTTTCCTTCCATTTCACATT AATAAGCGGTGAGTTAGTGCATATTTAGATACAAAGTATAAAATAACGATAAAACAAAATTTAGTGTGGACAGAAATAAT TTCTCTTATCTTTTAACTTTTACAACTGTTTATTGTGATATTTAATATTTTACAATGTATCCAATCATGTTTCTAGTCTC TTTCATGCAATCATCACTGTTTTGGACCTTTTGGTTGGTTTTCTTTCTCTGTCCCTCTCCCTTCAGTGAACCTCTGCACT AAAGAACTGCACCGATCCCAACAGTTCTCAGAAAATCAAGAGAACACAGAGTTTTTCCTGATTCATGAAGGATTTTCTGA TGAATCTCTGACATGAAAATAAATTGGGGAGGAGAGAGAGAGAGAGTATGATGAACGTGACAAAGTGACAAACATAAGTG AGAATCTTTTCAGTCCTTATCATAGTTTTCCTTTTTAACAGCTAAAAACCAGCCCCACTTCACTGAATCCCCTTAACATA CTGAAAAATTCTGTTTTTCTTCCCATTTAACTCTGGAGTACTTAGAAATTAGAAATCTAAATACCAACAATACACACTCC AAAACAATGGTGGATAATGATGCTTTTTGCTACCCATATCATCTTGATCATTTCATGCTTCCTCAAGAAAAAGGGCCTCT GGATTCAGAAATGCTAATTCACAAAAATTCTGTGAGCACTTTAATATGAGTAACATTGAACATTGTTCTTCTTTTAATCT TTTTCTTTCCTCATTATGCTGGTTTTCTAGTTCCTTATTTAACACTGAGCTTGAGTAATTTAAATATTCGAGTTTCCAAT ATGAATTAACTCCTCTTTTTTGTTTTTGGGGTTTTATTTATTGCAGAGGAAAGGAGCAGGTTCAACATCAGAAAAGCCAC TTGATGCAAAGGTTTTGATTGTTGAATGTCACACACACTGACACACACACATTTATTTATAATGTGCAATTGTGCATTAT ATGTTGTATTCCAAGTTATATTTATACTTTTATTTTTATGTATTCATGTGTGGTAATTCAATTTTTTTCTTGTTTGGTTT GGGTTCAGACACTAAGGCGTTTAGCTCAAAACAGAGAAGCTGCAAAGAAAAGCCGTCTCAGAAAAAAGGTGTGTCTCATA TAATTACATATACAATTTTTTGATTACAAAGAGTGAAAAGTTGGCCTCAATGCTTGGATACACGATAGAAAATTACATTG AAGCCGAAAATCATAATGGATAAGAAAACATTTTTCTTAATTTTTGCATATGACCATCACGATTGTTCTATACAATTAAT TCTGAAGTTGCAATTAGTTCTTATAGGAGCTTCTAGCTTCTAAATGTCAGAACTGATTCAGATAAAAAAATAAGTAGATA CATGTTGTATTTGTGTTGATCATTAATTATCCTTCACTACATTGCAAACAGGCTTATGTGCAGCAGCTAGAGTCAAGTAG GTTAAAACTCTCCCACCTTGAACAAGACCTTCAAAGATTGCGCTCCCAGGTATATAGTCTCACACACAATACTCTAGACT ATTGAATTATTATAAAATATGTAGGTGAAAAAATAATATTTAATGAATGTTATCTTGAAATAGTTTATCACACAAAAATA GTGCATAATGTTTGCTTTTTTTTAAAACTTCTAATGATAATTATTTGTGCTGCTTAATTTGACAGGGACTGTTCTTGGGT TGTGGTGTTGCTGGTGGCAATTTAAGCTCTGGTGAGTTTAGCCCTTTTTCTTCTTTTGTTCTTTTGTTGCTTTTCCAAAT GCAATTTTTTTCTAGTAAAAGATAGAAGGGAAGCATGGAAAAATTTGGCATCATATGAATACCGGAAAGTTTTGGGAAAT TTTTTACTCTTTTTTATACTTTAGAAATTAAGGGAGCAAGAAACAAGGAAATAAGTCGTCGGTGAGTACTTGCTATACAC GCAACTTTTTTATGCAGGTTGAATATGTTAATTAAAAATAAAACCAAAAGATTAAAGTCAAATTTTTATTTTGAGTTTGA AAAGTAAAACCCTATGCCAAAAAATAATCTAGAATCAGATATATAGAAGTCTTGGAATTTGACTAATGGTTATGGCCTAA TTCGCGTTTGAATCCTTGTAATAAAATAAGCTAGTAAAAAAAGACCATTATTCAAATAATTAAGCTCATCATGGTAATAT ATTAAAATGTAATATTGTTACAAAAAAAATATTAAAATGTAGTAATATAGAAAACGTGCGGTCCTTTCTACTTTTAGTTA ACACATTGGGATTAAAAAGATAAAGTTGTATGACAAAAAGTGCTAGTGTCCTAACAAAATGACGTTTGGAATGAAAATTA AAAAATAAAGCATATTAAATTAAGGTTTATCCATTGATTTTGTCCATCTGAGGACTGAAATGAAATGGTGCTAGGTCAGT TTCATTACGGGATATTTATACTGGTGCATCCAACCCATTACTTTTTAATAATATTAAAAATATATACGATATCGTAATAA GAAAAAAATTGCGATTTGTAACCATAATTGAGGCCACAATTAATATAAAAAAAATTGTGTTCTCGCAATGGATGCCACAA CCGTACTTGTGATCACATAACCCCACTTTTGTATATAAACAATTACTTGATATAACCAAGATCAAAACCACAATTTAAAT TCTATTTGTGATTTAGCATTATTAGTTAGCAAGTAGTAATTAACAAGTGAATCATTGTTTTGTTGTAGGAGCTGCAATGT TTGACATGGAGTACGCTAGGTGGTTAGAAGATGATCACCAGCACATGGCGGAGCTCCGTACGGGGCTGCAGGCGCCGTTG TCCGACAACGAACTCAGAGTCATTGTGGATGGGTATCTGTATCACTATGATGAGCTTTTCCGGTTGAAGGGGGTGGCTGC AAAATCAGATGTTTTTCACCTCATTAATGGCATGTGGACTTCCCCAACTGAGCGATGCTTCCTCTGGATAGGTGGTTTTA GACCCTCAGAGCTCATCACAGTATGTATTATCTATATATTCTTTTAGTATAATATTATCTGCCGTAAACTAAGAAAAATC TGGTTCACAAATTAACAATAATTCTCTTGGAAATCAAGTATATGTTATATTTGTTTGAAATGAATTAAGTATATATTATA AACCATGTTTAAATTGTTAGATAAATCCACTAATTTTAAACTAATCACATATTTTTATAATTATCTAACTCATACATATC TTTCATTAATTATTAGATGTTGATACAACAATTGGAGCCTTTGGCAGAGCAGCAAATAGTGGGCATATATGGTCTGAGGC ATTCATCACAACAAGCAGAAGAAGCTCTCTCACAGGGCCTCGAACAACTCCGCCATTTTCTCATTGACACGATCGCAGGT GCTCCTGTTGTCGACGGTGTGCAACAAATGGTCGTCGCCATGGGCAAGCTTGCCAACCTTGAAGGTTTTGTCCATCAGGT AATCAATTACGTTGTTATATCTATGGTGGATTATGTAAAAACTAATTCACCAATAAATTATATTTTTACATGTTTTTATA ATATACTTATTATGCACAAAAATTAATTTACGATTTTTTTCATGATAGGGAAAAGCTTATACGTACTAATGAACAATTTC ATATCATATATTGTGCCATGTTTCATATCTAAAGTAACGGGGGCATTTAATTATTAAGCAAAATGTCATATTTTATTGAA TTGATTGCTCACATTATGAAATAGGGGAATATTTTTCTTATGTCTTAATGCTAAAGTATTTTTGAGCATTAAATTTGGTG TGGGAGTTGACGTAAAGCCTCATGGTGATGACATCTGTGTCATGATTATTTGTAGCATAATTAATAATTTCTTTATGATA TACTCACTCCATTCCTATTTAACTGACATTTTAAGGTTGTTGCACAAGTATTAAGAAATAACAATTAATGTTTTTGTTTT ATTAAAGTTACAATCTAACTTCCTATTATACCCATTATCTCTCTTATTAATTCTACCTTTTCAATTTTCCTACCACCAAT AAATGAAGGGTACAATTGGTAAAGTATAATTAATGTTCTTTTGAACTTTGTAAAGTGGCAGATAAATAGGAACAAAATTC AGCTAGAACTAGTGTCAGTTACTTAGGAACAGAGGAGTAAATCTAGGGTGTGAAATGTAGCAAGTTTTTGTTTGAAAATG GATTGGTGACCATTCAATTCGGTTCATAGCTTTGTTTTATTCTCTTTTGACTTAAATCATTTAAAGATCTAGTTATGGAC CATTCTTTATTAATTATTACAGTACATAATATCCTTACATTTTACATAGTTAAGTGAAAATCGAAAGGAAAAAATAGTGG TGTAAATGAATATTTGTATATCAAATATTGATAATGATATGTGATGCATAATTAGTAATTATAGCTGAAATGTTACTTTC AAATTCTAGGTCATCCTGTTTCTTTTGCTCATTCATCCACTTCATGCATGTTTTGCGCCGCAATTCTGCCTTGTCTTATA CTAGAAAGTAGAATATTCTTAGCTTAATTTAACTTGAGATAATTCACTTTTTTTGAGTTTTTTCCCAGTATATGGCTAAA ATGTAAAAAAGCCAAAGCTTGAAAAGTACTTCTTTTAAATAATCCCTACACGTACGCTTGCCAAATGACAAATTAAATAT TATATATCTATCTTTGGTTCTTTGATAAGCATTATACTACTACCCTTGTAGACTTCATGCGTGTCACTATTGCATCAAGT TCTTTCAAAGTGATTAAATAAATTAATAATTTCTTGTAAATAACTAGGTTGACTTTATATATCACCTACTACGTTTTTGA CACGGTTGTACAATATAATTAGTATACATCTTTAATTATCAAATCGTTAATTTTAGGGTACTTTAGTTTATTACTTAGCA AGGTGCATGCATATATGTGTTTGACAAAACATTGAGTGCCAGCCATTTGATGTGTTTTGTCCATCTTAAAATGTTTAAAT CACAAGTTGGTTTTAGACAATGATGCCTGGAATAGACCCCCACAAAAAATGAAAACAGTGATGGCTTGTTGTTTAATTAA GCATAAACCTCAAGTAGACTTTTAGTTATTAAAAATTTTAAACTAGATTTTCATATTGTTTCTTTAAATTAAATTCAAGT GCTATATAAATATGAGCAATTTTATTATTAGACCATGTTAAAATCAATCCATGCACTCATAAACTATGTACCAATTATTT ACAATATGTTTCTTATATGCTGAAATTAATTTGTAGAAAAACCATTTTATTTTATGAATTAATTTTTTCTTGATTAACGA TAGGGAAAGTCATAAAAGATGATATATTTATGTAAAATAAGTCTAGTTCATAGATAAGACAACCTCATAAGTTTCAACCC TATTGATAGCATGTTGCTCTTGTCTATATGTGCTCCTAGCTAGATAAGGGGACCCATCTCATATGGTAGTTGGGGTTTGA AAATTGTTTGATTCCACTTTTTATATTAATTACTTGACTGATTATTCATTAAAATATACTCTCAGCTCCCTTTGACTACT TGATTAATTGTTTTGATTAAAATTGTTTGTTTGTGAATTGAATTGAAGGCTGATAATTTGAGGCAACAGAGTATTCACCA ATTATGTAGATTACTGACAATTCGTCAAGCAGCAAGGTGTTTTGTTGTGATTGGAGAGTATTATGGTCGTCTTCGAGCTC TTAGTTCTCTCTGGGCATCAAGACCACGAGATCACCAGCAGTAAGCAGATCTAACACCATATACTAAGAAATTAAATACA TTATTTTAATTTCAACATCTGAAATCTGTAACACTTCATCAATTGGTCAAAAGGATTAATTAATCCTTCTAAATGGGTTA AATACCTAGTTTTGCATTTCATCCTTTAAGTAAGTAGTCGGAGATTCAATTCTCATTTTTATGAATGAATTTTTTTTTAT TAATCAGTCCTCTATCACATAGTCACTGATTGTGGGACAAATGATTCACGGGCTAATAATGACTGTGAGATAACCTTGAT TAAGAAAAAAATAGTCAAAATGAGTTTTTTCTTCTTCTTAACTTTACCACGTTTATTCAAGTTTCAACAACAAATCTTGT GTATCTCAAACTTCAAAATCTGCTTCATTGAAATGTGATACCCTAATTTTTTTAATTATATTTTTGTTCAACAGGACTTT GATCAGCGATGATAACTCATGCCAAACAACCACGGAATTGCAAATGGTTCAATCTCACCAGGGTCATTTCTCTAATTTCT GAAGGATGTATATGTAATTGACACTAGTTATATGTTAGCATGAAAGAGTGGATGTATCTTTGGGGCTGCTTTAGATGGAA AGAGTGTCAGCATCATCAAGAATATATATTAATTTATTTTTCTTTTCTCTTTTTTATTTTAAATCCTCCACCCCTTTCGT GTAGACGTTTTATTGTAAATGGAATTCAAGTTTAATGTGAATGATGAGGAATTGAAGCTTCTACTTGAGTTTAAAGTTTA AACTAATAAAAAGGACAATGCTTTTTAGGTCGTA
CDS sequence (LotjaGi3g1v0477400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGCCAAACAATCGGAGAAACCGGTTTGTCTGAGTCAGGGCCTTCAACTCACCATGTTCCTTATGGAGTTCTTCA TGGGATAACTACCTCTGCATCAGGATTAATTAATCAAGGGGAAGCTTTTGATTTTGGAGAGCTTGAAGAGGCAATTGTTC TCCAAGGATTTAAGATTAGAAATGATGAAGCCAAAGCAACTTTGTTCACAGGCAGGCCTGCAGCTACACTGGAAATGTTC CCTTCATGGCCAATGAGATTCCAACAAACAACACCAAGAGTAGTAGCCTCTCTCAGTTCTCCATCTTTGACCAATCCATA TGGAAGTTCAAAGTCAGGAGGGGAAAGCACTGAATCAGGATCAGGAATGAACACTCTTTCAACCAAAACTGAGCTTCAGT TTGAAACAGACTCTCCTACAAGTATAAAGGCATCTTCTTCAGACCATCATCATGCTTTTGATCAGCATCACCTGCAGCTT CAACAGCAAAAACAACACCAACTTCAACATGAGAAGACTACTGATCATGATGCCTCAAAAGCTGACCCACCACAGAATCA ACCAGCAGCAAAATCAGCTCAGGAAAAGAGGAAAGGAGCAGGTTCAACATCAGAAAAGCCACTTGATGCAAAGACACTAA GGCGTTTAGCTCAAAACAGAGAAGCTGCAAAGAAAAGCCGTCTCAGAAAAAAGGCTTATGTGCAGCAGCTAGAGTCAAGT AGGTTAAAACTCTCCCACCTTGAACAAGACCTTCAAAGATTGCGCTCCCAGGGACTGTTCTTGGGTTGTGGTGTTGCTGG TGGCAATTTAAGCTCTGGAGCTGCAATGTTTGACATGGAGTACGCTAGGTGGTTAGAAGATGATCACCAGCACATGGCGG AGCTCCGTACGGGGCTGCAGGCGCCGTTGTCCGACAACGAACTCAGAGTCATTGTGGATGGGTATCTGTATCACTATGAT GAGCTTTTCCGGTTGAAGGGGGTGGCTGCAAAATCAGATGTTTTTCACCTCATTAATGGCATGTGGACTTCCCCAACTGA GCGATGCTTCCTCTGGATAGGTGGTTTTAGACCCTCAGAGCTCATCACAATGTTGATACAACAATTGGAGCCTTTGGCAG AGCAGCAAATAGTGGGCATATATGGTCTGAGGCATTCATCACAACAAGCAGAAGAAGCTCTCTCACAGGGCCTCGAACAA CTCCGCCATTTTCTCATTGACACGATCGCAGGTGCTCCTGTTGTCGACGGTGTGCAACAAATGGTCGTCGCCATGGGCAA GCTTGCCAACCTTGAAGGTTTTGTCCATCAGGCTGATAATTTGAGGCAACAGAGTATTCACCAATTATGTAGATTACTGA CAATTCGTCAAGCAGCAAGGTGTTTTGTTGTGATTGGAGAGTATTATGGTCGTCTTCGAGCTCTTAGTTCTCTCTGGGCA TCAAGACCACGAGATCACCAGCAGACTTTGATCAGCGATGATAACTCATGCCAAACAACCACGGAATTGCAAATGGTTCA ATCTCACCAGGGTCATTTCTCTAATTTCTGA
Protein sequence (LotjaGi3g1v0477400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASQTIGETGLSESGPSTHHVPYGVLHGITTSASGLINQGEAFDFGELEEAIVLQGFKIRNDEAKATLFTGRPAATLEMF PSWPMRFQQTTPRVVASLSSPSLTNPYGSSKSGGESTESGSGMNTLSTKTELQFETDSPTSIKASSSDHHHAFDQHHLQL QQQKQHQLQHEKTTDHDASKADPPQNQPAAKSAQEKRKGAGSTSEKPLDAKTLRRLAQNREAAKKSRLRKKAYVQQLESS RLKLSHLEQDLQRLRSQGLFLGCGVAGGNLSSGAAMFDMEYARWLEDDHQHMAELRTGLQAPLSDNELRVIVDGYLYHYD ELFRLKGVAAKSDVFHLINGMWTSPTERCFLWIGGFRPSELITMLIQQLEPLAEQQIVGIYGLRHSSQQAEEALSQGLEQ LRHFLIDTIAGAPVVDGVQQMVVAMGKLANLEGFVHQADNLRQQSIHQLCRLLTIRQAARCFVVIGEYYGRLRALSSLWA SRPRDHQQTLISDDNSCQTTTELQMVQSHQGHFSNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 31 | 494 | 464 | 2.4E-208 | – | |
PANTHER | 31 | 494 | 464 | 2.4E-208 | – | |
MobiDBLite | 98 | 146 | 49 | - | – | |
MobiDBLite | 98 | 213 | 116 | - | – | |
MobiDBLite | 198 | 213 | 16 | - | – | |
SMART | 207 | 283 | 77 | 9.7E-7 | ||
ProSiteProfiles | 209 | 253 | 45 | 8.979 | ||
Pfam | 210 | 251 | 42 | 9.2E-8 | ||
Gene3D | 211 | 259 | 49 | 2.2E-9 | – | |
CDD | 211 | 262 | 52 | 4.86448E-22 | – | |
SUPERFAMILY | 211 | 251 | 41 | 1.06E-6 | – | |
ProSitePatterns | 214 | 229 | 16 | - | ||
Coils | 230 | 257 | 28 | - | – | |
ProSiteProfiles | 274 | 482 | 209 | 30.005 | ||
Pfam | 291 | 366 | 76 | 2.1E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi3g1v0477400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…