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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR025422
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We have found 65 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.789s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0017149.1
n.a. TGA-type basic leucine zipper protein TGA1.1 [Phaseolus vulgaris] gi|15148922|gb|AAK84888.1|AF402607_1 chr0 6653761 6655795 +
2 domain predictions
2 GO terms
Lj0g3v0077279.1
n.a. PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max] gi|356499701|ref|XP_003518675.1| chr0 29590502 29596699 +
2 domain predictions
2 GO terms
Lj0g3v0077279.2
n.a. PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max] gi|356499701|ref|XP_003518675.1| chr0 29590502 29596699 +
2 domain predictions
2 GO terms
Lj0g3v0087799.1
n.a. TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] gi|15148924|gb|AAK84889.1|AF402608_1 chr0 35772583 35781135 +
2 domain predictions
2 GO terms
Lj0g3v0201259.1
n.a. PREDICTED: transcription factor HBP-1b(c1)-like [Cicer arietinum] gi|502122910|ref|XP_004497935.1| chr0 99468895 99473241 +
2 domain predictions
2 GO terms
Lj0g3v0239739.1
n.a. TGA-type basic leucine zipper protein TGA1.1 [Phaseolus vulgaris] gi|15148922|gb|AAK84888.1|AF402607_1 chr0 124450464 124452498 -
2 domain predictions
2 GO terms
Lj0g3v0336269.1
n.a. PREDICTED: transcription factor TGA7-like [Glycine max] gi|356552851|ref|XP_003544776.1| chr0 176119282 176123535 +
2 domain predictions
2 GO terms
Lj0g3v0336279.1
n.a. transcription factor bZIP83, partial [Glycine max] gi|145652349|gb|ABP88229.1| chr0 176119282 176124239 +
2 domain predictions
2 GO terms
Lj1g3v0726910.1
n.a. PREDICTED: transcription factor TGA3-like isoform X3 [Cicer arietinum] gi|502175012|ref|XP_004515653.1| chr1 9651805 9655880 +
2 domain predictions
2 GO terms
Lj1g3v2370100.1
n.a. PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max] gi|356523320|ref|XP_003530288.1| chr1 27713922 27719606 -
2 domain predictions
2 GO terms
Lj1g3v2370100.2
n.a. PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max] gi|356523320|ref|XP_003530288.1| chr1 27713922 27719606 -
2 domain predictions
2 GO terms
Lj1g3v4141650.1
n.a. PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Cicer arietinum] gi|502108158|ref|XP_004493401.1| chr1 49185678 49192129 -
2 domain predictions
2 GO terms
Lj1g3v4315340.1
n.a. PREDICTED: transcription factor HBP-1b(c1)-like isoform X1 [Cicer arietinum] gi|502109068|ref|XP_004493558.1| chr1 50665704 50673249 -
2 domain predictions
2 GO terms
Lj1g3v4315340.2
n.a. PREDICTED: transcription factor HBP-1b(c1)-like isoform X1 [Cicer arietinum] gi|502109068|ref|XP_004493558.1| chr1 50665704 50673249 -
2 domain predictions
2 GO terms
Lj1g3v4315340.3
n.a. PREDICTED: transcription factor HBP-1b(c1)-like isoform X1 [Cicer arietinum] gi|502109068|ref|XP_004493558.1| chr1 50669162 50673249 -
2 domain predictions
2 GO terms
Lj3g3v1171240.1
n.a. PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Glycine max] gi|356542019|ref|XP_003539469.1| chr3 15695654 15702649 +
2 domain predictions
2 GO terms
Lj3g3v1906610.1
n.a. TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] gi|15148924|gb|AAK84889.1|AF402608_1 chr3 24531789 24540657 -
2 domain predictions
2 GO terms
Lj3g3v2994560.1
n.a. PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Glycine max] gi|356542019|ref|XP_003539469.1| chr3 37125326 37133809 +
2 domain predictions
2 GO terms
Lj4g3v2827900.1
n.a. PREDICTED: transcription factor HBP-1b(c38)-like [Cicer arietinum] gi|502139771|ref|XP_004503896.1| chr4 37945216 37946725 -
2 domain predictions
2 GO terms
Lj5g3v0838850.1
n.a. PREDICTED: transcription factor HBP-1b(c38)-like [Cicer arietinum] gi|502089967|ref|XP_004489078.1| chr5 11923102 11924771 -
2 domain predictions
2 GO terms
Lj5g3v2217180.1
n.a. PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max] gi|356536334|ref|XP_003536694.1| chr5 31924581 31928982 +
2 domain predictions
2 GO terms
Lj6g3v1161820.1
n.a. Uncharacterized protein isoform 2 [Theobroma cacao] gi|508777159|gb|EOY24415.1| chr6 14135974 14137243 +
2 domain predictions
2 GO terms
LotjaGi1g1v0150600.1
n.a. transcription factor-like protein; TAIR: AT5G65210.1 bZIP transcription factor family protein; Swiss-Prot: sp|Q39237|TGA1_ARATH Transcription factor TGA1; TrEMBL-Plants: tr|I3T7J6|I3T7J6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0150600 LjG1.1_chr1 25851474 25857887 +
3 domain predictions
2 GO terms
LotjaGi1g1v0150600.2
n.a. transcription factor-like protein; TAIR: AT5G65210.1 bZIP transcription factor family protein; Swiss-Prot: sp|Q39237|TGA1_ARATH Transcription factor TGA1; TrEMBL-Plants: tr|I3T7J6|I3T7J6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0150600 LjG1.1_chr1 25851802 25856492 +
3 domain predictions
2 GO terms
LotjaGi1g1v0150600.3
n.a. transcription factor-like protein; TAIR: AT5G65210.1 bZIP transcription factor family protein; Swiss-Prot: sp|Q39237|TGA1_ARATH Transcription factor TGA1; TrEMBL-Plants: tr|I3T7J6|I3T7J6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0150600 LjG1.1_chr1 25852203 25856492 +
3 domain predictions
2 GO terms
LotjaGi1g1v0248400.1
n.a. transcription factor-like protein; TAIR: AT1G22070.1 transcription factor TGA3; Swiss-Prot: sp|Q39234|TGA3_ARATH Transcription factor TGA3; TrEMBL-Plants: tr|K7KMA1|K7KMA1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0248400 LjG1.1_chr1 59652598 59656636 +
3 domain predictions
2 GO terms
LotjaGi1g1v0248400.2
n.a. transcription factor-like protein; TAIR: AT1G22070.1 transcription factor TGA3; Swiss-Prot: sp|Q39234|TGA3_ARATH Transcription factor TGA3; TrEMBL-Plants: tr|K7KMA1|K7KMA1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0248400 LjG1.1_chr1 59652598 59656736 +
3 domain predictions
2 GO terms
LotjaGi1g1v0442700.1
n.a. transcription factor-like protein; TAIR: AT1G58330.1 transcription factor-like protein; Swiss-Prot: sp|Q84JC2|DOGL4_ARATH Protein DOG1-like 4; TrEMBL-Plants: tr|I1KKG2|I1KKG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0442700 LjG1.1_chr1 93988646 93993607 -
3 domain predictions
2 GO terms
LotjaGi1g1v0442700.2
n.a. transcription factor-like protein; TAIR: AT1G58330.1 transcription factor-like protein; Swiss-Prot: sp|Q84JC2|DOGL4_ARATH Protein DOG1-like 4; TrEMBL-Plants: tr|I1KKG2|I1KKG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0442700 LjG1.1_chr1 93988646 93993607 -
3 domain predictions
2 GO terms
LotjaGi1g1v0663800.1
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|I3T9L1|I3T9L1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663800 LjG1.1_chr1 122537326 122544554 -
3 domain predictions
2 GO terms
LotjaGi1g1v0663800.2
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|I3T9L1|I3T9L1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663800 LjG1.1_chr1 122537326 122544554 -
3 domain predictions
2 GO terms
LotjaGi1g1v0663800.3
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|I3T9L1|I3T9L1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663800 LjG1.1_chr1 122537669 122544430 -
3 domain predictions
2 GO terms
LotjaGi1g1v0663800.4
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|I3T9L1|I3T9L1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663800 LjG1.1_chr1 122537745 122544355 -
3 domain predictions
2 GO terms
LotjaGi1g1v0663800.5
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|I3T9L1|I3T9L1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663800 LjG1.1_chr1 122538260 122543111 -
3 domain predictions
2 GO terms
LotjaGi1g1v0663800.6
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|I3T9L1|I3T9L1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663800 LjG1.1_chr1 122538260 122543111 -
3 domain predictions
2 GO terms
LotjaGi1g1v0663800.7
n.a. transcription factor-like protein; TAIR: AT5G06950.1 bZIP transcription factor family protein; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|I3T9L1|I3T9L1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663800 LjG1.1_chr1 122538260 122543200 -
3 domain predictions
2 GO terms
LotjaGi1g1v0663800.8
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|I3T9L1|I3T9L1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663800 LjG1.1_chr1 122538260 122543247 -
3 domain predictions
2 GO terms
LotjaGi1g1v0724300.1
n.a. transcription factor-like protein; TAIR: AT5G06839.3 bZIP transcription factor family protein; Swiss-Prot: sp|Q52MZ2|TGA10_TOBAC bZIP transcription factor TGA10; TrEMBL-Plants: tr|A0A0L9U7L8|A0A0L9U7L8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0724300 LjG1.1_chr1 129538942 129547367 -
3 domain predictions
2 GO terms
LotjaGi1g1v0724300.2
n.a. transcription factor-like protein; TAIR: AT5G06839.2 bZIP transcription factor family protein; Swiss-Prot: sp|Q52MZ2|TGA10_TOBAC bZIP transcription factor TGA10; TrEMBL-Plants: tr|A0A151TUB5|A0A151TUB5_CAJCA Transcription factor HBP-1b(C1); Found in the gene: LotjaGi1g1v0724300 LjG1.1_chr1 129539747 129545837 -
3 domain predictions
2 GO terms
LotjaGi1g1v0724300.3
n.a. transcription factor-like protein; TAIR: AT5G06839.3 bZIP transcription factor family protein; Swiss-Prot: sp|Q52MZ2|TGA10_TOBAC bZIP transcription factor TGA10; TrEMBL-Plants: tr|A0A151TUB5|A0A151TUB5_CAJCA Transcription factor HBP-1b(C1); Found in the gene: LotjaGi1g1v0724300 LjG1.1_chr1 129539747 129545837 -
3 domain predictions
2 GO terms
LotjaGi2g1v0279100.1
n.a. transcription factor-like protein; TAIR: AT1G68640.1 bZIP transcription factor family protein; Swiss-Prot: sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1); TrEMBL-Plants: tr|K7K7E4|K7K7E4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0279100 LjG1.1_chr2 75063258 75069612 -
3 domain predictions
2 GO terms
LotjaGi2g1v0279100.2
n.a. transcription factor-like protein; TAIR: AT1G68640.1 bZIP transcription factor family protein; Swiss-Prot: sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1); TrEMBL-Plants: tr|K7K7E4|K7K7E4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0279100 LjG1.1_chr2 75063258 75069707 -
3 domain predictions
2 GO terms
LotjaGi3g1v0108100.1
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|Q6IVC2|TGAL1_ORYSJ Transcription factor TGAL1; TrEMBL-Plants: tr|Q93XA1|Q93XA1_PHAVU TGA-type basic leucine zipper protein TGA2.1; Found in the gene: LotjaGi3g1v0108100 LjG1.1_chr3 13316882 13326290 -
3 domain predictions
2 GO terms
LotjaGi3g1v0108100.2
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1); TrEMBL-Plants: tr|Q93XA1|Q93XA1_PHAVU TGA-type basic leucine zipper protein TGA2.1; Found in the gene: LotjaGi3g1v0108100 LjG1.1_chr3 13317395 13326076 -
3 domain predictions
2 GO terms
LotjaGi3g1v0108100.3
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|Q6IVC2|TGAL1_ORYSJ Transcription factor TGAL1; TrEMBL-Plants: tr|Q93XA1|Q93XA1_PHAVU TGA-type basic leucine zipper protein TGA2.1; Found in the gene: LotjaGi3g1v0108100 LjG1.1_chr3 13317395 13326076 -
3 domain predictions
2 GO terms
LotjaGi3g1v0108100.4
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1); TrEMBL-Plants: tr|Q93XA1|Q93XA1_PHAVU TGA-type basic leucine zipper protein TGA2.1; Found in the gene: LotjaGi3g1v0108100 LjG1.1_chr3 13317747 13322061 -
3 domain predictions
2 GO terms
LotjaGi3g1v0157800.1
n.a. transcription factor-like protein; TAIR: AT3G14880.2 transcription factor-like protein; Swiss-Prot: sp|Q84JC2|DOGL4_ARATH Protein DOG1-like 4; TrEMBL-Plants: tr|Q2HSA7|Q2HSA7_MEDTR Transcription factor TGA5-like protein; Found in the gene: LotjaGi3g1v0157800 LjG1.1_chr3 21566276 21574691 -
3 domain predictions
2 GO terms
LotjaGi3g1v0176400.1
n.a. transcription factor-like protein; TAIR: AT1G08320.1 bZIP transcription factor family protein; Swiss-Prot: sp|Q93XM6|TGA9_ARATH Transcription factor TGA9; TrEMBL-Plants: tr|A0A151RN10|A0A151RN10_CAJCA TGACG-sequence-specific DNA-binding protein TGA-2.1; Found in the gene: LotjaGi3g1v0176400 LjG1.1_chr3 24546767 24554837 +
3 domain predictions
2 GO terms
LotjaGi3g1v0176400.2
n.a. transcription factor-like protein; TAIR: AT1G08320.1 bZIP transcription factor family protein; Swiss-Prot: sp|Q93XM6|TGA9_ARATH Transcription factor TGA9; TrEMBL-Plants: tr|A0A151RN10|A0A151RN10_CAJCA TGACG-sequence-specific DNA-binding protein TGA-2.1; Found in the gene: LotjaGi3g1v0176400 LjG1.1_chr3 24546806 24554616 +
3 domain predictions
2 GO terms
LotjaGi3g1v0316800.1
n.a. transcription factor-like protein; TAIR: AT3G12250.1 TGACG motif-binding factor 6; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|Q93XA1|Q93XA1_PHAVU TGA-type basic leucine zipper protein TGA2.1; Found in the gene: LotjaGi3g1v0316800 LjG1.1_chr3 67109920 67119088 -
3 domain predictions
2 GO terms