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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0501700 |
| Transcript ID | LotjaGi3g1v0501700.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Purple acid phosphatase; TAIR: AT4G21323.1 Subtilase family protein; Swiss-Prot: sp|P21885|SPEA_BACSU Arginine decarboxylase; TrEMBL-Plants: tr|A0A0R0H895|A0A0R0H895_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0501700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92016543..92018530) extracted from Lotus japonicus Gifu genome v1.2.
TTTAGTTTAATTGAGGTGGGTAATGAAAAATAGCTCTAGCCAGGTCTGAATTGAACTGAAATGTCAATTTTCCATTACTA CTTTCTCATTTTGAATTTGGCCTACAAGTCCCATCACTCTGTTGAATTTTTATCAGGCAGTGAGTTTTTTTAGTCTCATA ATATTTAAAATGTCTGGTAGGGAAGAAGCATTGCTATGCCTGCATATGACCAAGATGAGGAAACTGGGAGATTGAACACT GCATCGATCACAAATGACAATGTTTTGTGTAGTGACTCGTCATTGCTTCAGCGAAATGAGCTACCTCCTCTAGTCAGTGC ATTGAAAGCATCAGCTGAACAAAACACTGCCAGTTTTCACTTTCCTGGGCATAATAGAGGCAATGCCGCACCTGCTTCGA TGGCCCGGCTCATTGGAATAAGACCATATTCTCATGACTTGCCTGAGCTTCCAGAGCTTGACAACCTCTTTTGCCCCCAG GGGCCCATATTGGAAGCGCAGAAAGAAGCAGCCAAACTGTTCGGATCGTCGGAGACGTGGTTTCTTGTTGGAGGTACTAC TTGTGGGATCCAGGCAGCAATAATGGCCACTTGTTCACCGGGAGAATTTCTGATTCTTCCTAGGAATTGTCATTTGTCAG CTATATCTGCTATGGTATTATCTGGTGCAGTGCCTAAGTACATCGTTCCTGACTATAAGAATGATTGGGACATCGCCGGT GGTGTCACTGCATTACAGGTGATTCAACTTTGTTTCTAAATTTGTAAAAGTTTGCTGATAATATTTTTTGGCATGACAGC AATTGATATGAACATAATTGTGTATTCATTCCAAATGGAATCTAAATAGGTTTTCCAACTCTTACTCCGAAGATGAGTTT TTGTTCTGGATTTCTGATTTGTACTGTCCTCAATGTTGTTCTCACCTTTTTTTTCTGAATGTTGGATGACTGGATGTTGT TGCAGGTATTGAAAGCTATGCAGGAACTAGAAAAGGAAGGGAAAAAAGCAGCAGCTGTTTTCATCACTTCACCTACTTAT CATGGTATTTGCAGTGACTTGAGCGAGATTTCGGAGTTGTGTCATTCTCATAAAATTCCTTTGATTGTTGATGAAGCTCA TGGTGCACATCTAGGATTTCATTCTGAACTACCTAACTCTGCCCTCCAGCAAGGGGCTGATCTGGCTGTACAGTCTACTC ACAAAGTCCTGTGCTCTCTTACTCAATCATCTATGCTTCACATGTCAGGTGATATTGTAGATAAGGAAAAAATTTCTAGA TGTCTCCAAACTCTTCAAACCACAAGCCCTAGTTATCTGCTTTTGGCATCCCTAGATGCTGCTAGAGCACAACTTAGTGA AAGCCCTGATACGGCATTCAACCACGCAATCAAATTAGCCCGTGAAGCAAAGTGCCAGCTAAAACAAATCCCTGGTATCT CAGTGCTTGAGAATTCAAGCTTTCCAGCCTTTCCTGGTACTGATCCACTGCGGCTTACTGTAGGGTTTTGGAAGCTTGGT TTATCAGGTTATGAAGCTGATGAAATCTTATACAGTGATTACGGAATCGTCTGTGAACTTGTTGGGAATAAGTCTATCAC TTATGCCCTTAATCTTGGAACTCGTCGCAACCACGTCGAAAGGCTACTATTGGGAATAAAGCATCTAGCTGCAGCATATT TTTCCACTCGGCAACCTGAAGAAAGAGTGCTCACTACTGGTCATGCACCCTTTGATGATATAATCATGAGTTTGATCCCT AGAGATGCCTTTTTTGCAAGTAAAAGAAAAGTAACATTGAAGGAGAGCATTGGTGAGGTTTCAGGGGAGCTTATATGTCC ATACCCTCCAGGCATACCGGTATTGATCCCTGGTGAGGTTATTACCGACAAAGCTGCTGATTATCTACTTCATGTCAGGA GTAAAGGTGCTGATATTAGTGGAGCATCTGATCCCTCTCTTTCTTCTGTAGTTGTTTGCAATGTATAG
CDS sequence (LotjaGi3g1v0501700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAATAGCTCTAGCCAGGGAAGAAGCATTGCTATGCCTGCATATGACCAAGATGAGGAAACTGGGAGATTGAACAC TGCATCGATCACAAATGACAATGTTTTGTGTAGTGACTCGTCATTGCTTCAGCGAAATGAGCTACCTCCTCTAGTCAGTG CATTGAAAGCATCAGCTGAACAAAACACTGCCAGTTTTCACTTTCCTGGGCATAATAGAGGCAATGCCGCACCTGCTTCG ATGGCCCGGCTCATTGGAATAAGACCATATTCTCATGACTTGCCTGAGCTTCCAGAGCTTGACAACCTCTTTTGCCCCCA GGGGCCCATATTGGAAGCGCAGAAAGAAGCAGCCAAACTGTTCGGATCGTCGGAGACGTGGTTTCTTGTTGGAGGTACTA CTTGTGGGATCCAGGCAGCAATAATGGCCACTTGTTCACCGGGAGAATTTCTGATTCTTCCTAGGAATTGTCATTTGTCA GCTATATCTGCTATGGTATTATCTGGTGCAGTGCCTAAGTACATCGTTCCTGACTATAAGAATGATTGGGACATCGCCGG TGGTGTCACTGCATTACAGGTATTGAAAGCTATGCAGGAACTAGAAAAGGAAGGGAAAAAAGCAGCAGCTGTTTTCATCA CTTCACCTACTTATCATGCCCTCCAGCAAGGGGCTGATCTGGCTGTACAGTCTACTCACAAAGTCCTGTGCTCTCTTACT CAATCATCTATGCTTCACATGTCAGGTGATATTGTAGATAAGGAAAAAATTTCTAGATGTCTCCAAACTCTTCAAACCAC AAGCCCTAGTTATCTGCTTTTGGCATCCCTAGATGCTGCTAGAGCACAACTTAGTGAAAGCCCTGATACGGCATTCAACC ACGCAATCAAATTAGCCCGTGAAGCAAAGTGCCAGCTAAAACAAATCCCTGGTATCTCAGTGCTTGAGAATTCAAGCTTT CCAGCCTTTCCTGGTACTGATCCACTGCGGCTTACTGTAGGGTTTTGGAAGCTTGGTTTATCAGGTTATGAAGCTGATGA AATCTTATACAGTGATTACGGAATCGTCTGTGAACTTGTTGGGAATAAGTCTATCACTTATGCCCTTAATCTTGGAACTC GTCGCAACCACGTCGAAAGGCTACTATTGGGAATAAAGCATCTAGCTGCAGCATATTTTTCCACTCGGCAACCTGAAGAA AGAGTGCTCACTACTGGTCATGCACCCTTTGATGATATAATCATGAGTTTGATCCCTAGAGATGCCTTTTTTGCAAGTAA AAGAAAAGTAACATTGAAGGAGAGCATTGGTGAGGTTTCAGGGGAGCTTATATGTCCATACCCTCCAGGCATACCGGTAT TGATCCCTGGTGAGGTTATTACCGACAAAGCTGCTGATTATCTACTTCATGTCAGGAGTAAAGGTGCTGATATTAGTGGA GCATCTGATCCCTCTCTTTCTTCTGTAGTTGTTTGCAATGTATAG
Protein sequence (LotjaGi3g1v0501700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNSSSQGRSIAMPAYDQDEETGRLNTASITNDNVLCSDSSLLQRNELPPLVSALKASAEQNTASFHFPGHNRGNAAPAS MARLIGIRPYSHDLPELPELDNLFCPQGPILEAQKEAAKLFGSSETWFLVGGTTCGIQAAIMATCSPGEFLILPRNCHLS AISAMVLSGAVPKYIVPDYKNDWDIAGGVTALQVLKAMQELEKEGKKAAAVFITSPTYHALQQGADLAVQSTHKVLCSLT QSSMLHMSGDIVDKEKISRCLQTLQTTSPSYLLLASLDAARAQLSESPDTAFNHAIKLAREAKCQLKQIPGISVLENSSF PAFPGTDPLRLTVGFWKLGLSGYEADEILYSDYGIVCELVGNKSITYALNLGTRRNHVERLLLGIKHLAAAYFSTRQPEE RVLTTGHAPFDDIIMSLIPRDAFFASKRKVTLKESIGEVSGELICPYPPGIPVLIPGEVITDKAADYLLHVRSKGADISG ASDPSLSSVVVCNV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 23 | 219 | 197 | 5.3E-205 | – | |
| PANTHER | 23 | 219 | 197 | 5.3E-205 | – | |
| SUPERFAMILY | 49 | 386 | 338 | 1.33E-62 | ||
| Gene3D | 49 | 220 | 172 | 3.2E-53 | ||
| Pfam | 49 | 220 | 172 | 1.8E-34 | ||
| PANTHER | 220 | 493 | 274 | 5.3E-205 | – | |
| PANTHER | 220 | 493 | 274 | 5.3E-205 | – | |
| Gene3D | 221 | 287 | 67 | 5.9E-33 | ||
| Pfam | 227 | 309 | 83 | 1.2E-15 | ||
| Gene3D | 288 | 377 | 90 | 5.9E-33 | – | |
| SUPERFAMILY | 348 | 492 | 145 | 7.45E-29 | ||
| Pfam | 428 | 474 | 47 | 8.1E-9 | ||
| Gene3D | 430 | 485 | 56 | 1.3E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi3g1v0501700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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