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IPR036633 is a Orn/Lys/Arg decarboxylase, C-terminal domain superfamily.
<p>Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates [[cite:PUB00001452]]. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group. Ornithine decarboxylase is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. Arginine decarboxylase catalyzes the decarboxylation of arginine and lysine decarboxylase catalyzes the decarboxylation of lysine. Members of this superfamily are widely found in all three forms of life [[cite:PUB00001452], [cite:PUB00014378], [cite:PUB00014382], [cite:PUB00014393], [cite:PUB00006301], [cite:PUB00006322], [cite:PUB00079513], [cite:PUB00079514], [cite:PUB00035507], [cite:PUB00016775], [cite:PUB00016898], [cite:PUB00006531], [cite:PUB00079515], [cite:PUB00070977]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Purple acid phosphatase; TAIR: AT3G01120.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P21885|SPEA_BACSU Arginine decarboxylase; TrEMBL-Plants: tr|I1LQA4|I1LQA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0501700 | 14 | ||
| – | Purple acid phosphatase; TAIR: AT3G01120.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P21885|SPEA_BACSU Arginine decarboxylase; TrEMBL-Plants: tr|I1LQA4|I1LQA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0501700 | 14 | ||
| – | Purple acid phosphatase; TAIR: AT3G01120.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P21885|SPEA_BACSU Arginine decarboxylase; TrEMBL-Plants: tr|I1LQA4|I1LQA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0501700 | 15 | ||
| – | Purple acid phosphatase; TAIR: AT4G21323.1 Subtilase family protein; Swiss-Prot: sp|P21885|SPEA_BACSU Arginine decarboxylase; TrEMBL-Plants: tr|A0A0R0H895|A0A0R0H895_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0501700 | 15 | ||
| – | Purple acid phosphatase; TAIR: AT3G01120.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P21885|SPEA_BACSU Arginine decarboxylase; TrEMBL-Plants: tr|I1LQA4|I1LQA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0501700 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00615 | CDD | 1 | 20.00 |