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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0509800 |
| Transcript ID | LotjaGi3g1v0509800.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92694381..92697829) extracted from Lotus japonicus Gifu genome v1.2.
CAGGTCCCTGTTGGTGGATGCTACAGGCTTATAGACATCCCAACGAGCAACTGCATTAACAGTGGCATCAACAAAGTATT TGTGTTGACCCAGTTCAACTCTGCATCTCTCAACCGTCACATCTCCCGCACCTATTTCGGAAATGGCATCAATTTTGGGG ATGGATGTGTGGAGGTATGTCTCATGGAGTTGGATGGTAATTGTTAGAGGGCCGTTCACCATAATCTAGTTGATTTATTT TGTAAGATATTATGCACTTTGGTTTCACAATTTGCACATAATCAAAGACACATTTGCGCAGAAGGCGAGACTTGTAGCTT CTAATCAGAAGTGATTCTAGTTCTATAACATTTCACCATGGAATCAAACATGCTAGCTATATCTGACTTCAAGTTGCCAA TACACATTTTTGTTCATTCATGATGATAAAAGAAACCTAAATACTCTACAGGTTCTAGCGGCCACCCAAACACCAGGAGA AGCTGGCAAGAATTGGTTCCAAGGCACTGCAGATGCTGTGAGGCAATTCACTTGGGTATTTGAGGTGGGAACATAATTTT TGCATATATCAGATTTCAGAATGTACTGCATATCCTCAAGTTGAACTGGACAGTAATAGATTGAGTGTTGTAGGATGCCA AGCACACAAACATTGAGAATGTGTTGATCTTGGCAGGAGATCATCTATACCGTATGGATTACATGGACCTTGTGCAGGTA AAAGGTTACTTGTTTCATGTGTTGGATTAGTTATTCATTTCATTGTCACAGCTTTTAACTTAAAAAATTAAACAGAGTCA TGTAGACAGAAATGCAGATATTACAGTATCATGTGCTGCAGTGGATGACAGGTGTGTTCAGTGCTCTTTTAGATGTGTTC CTTTATTTCCATGTTTGTTTGTTTGTTTGATATCACTTTATTTGAACTTCTAGCTATTTTACTTTTGTTTCACTACTGCG TATTTGATTGAGAAGGAAAGAGCCATGAGAAAAGAGGCATAGACACACTAACTTCCTCAAAAAAATTATTTCAAACTTAG TTTAATCTAAGTTTCATTTCTAATTGCATACTTTTTAGTCGAGCATCAGATTATGGATTGGTCAAGGTAGATGGCAGAGG CCGCATCATCCAATTTTCAGAAAAACCGAAGGGTTCTGATCTGAAAGAAATGGTAAGTTCCAACTCTATAGCCTATTTGG CATTCAACTGAAGAAGGTTCTTGGTCACTATCTGAAAGCAAAAATTACGGCATGTTTGCATACACAGTAGATTTTCACGT TGGAAGAAGGATTGATTATGAGAGAAGTTACTCCCAGTAGCTTGTGGTTGCAGAAATGATTTTTGAAGTTCTGAACTTGA ATACAAACATGCTATACCACCCTCTATTTCAGTAGTCCTTTAAAACTGATCATCTTAGCACTACAGCATCTCCAGAGAAG TTCATACTTTATATTTGATATACATCATAGGATAACATCAAAATCTCTTGTACTAAACATGTTAATAACATGAAGATCTA CATCTAAAACATACAGATATATATAGGCTTGATTATCAAACTTCTAATACAGTTGAATCCCATATTTGTTATTCTACCTT TCCATAATTATGAACTTTTTCTACAAACTTGCAGCCCCAAATTTTATTTCCATCTGCCCTCATTCTTTTAATGTGTTCCT TTTGCTTCTATGCAGCAAGTAGATACCTCTCTTTTTGGCTTGTCACCTCAAGAAGCATTAAAGTCACCATATATTGCATC TATGGGGGTTTATGTATTCAAGACGGATGTTTTACTTAACCTTCTAAAATGGAGATATCCTACTTCGAATGACTTTGGAT CTGAAATCATTCCTGCAGCTGTGAAGGAATACAATGTCCAAGTAAGAAATTCCAGTTCGATATATCGCTTTTCATATTTA GATCTATTCTAGAAGGAGTCTTGTCTTCCATTTACAAGGGACTGATAACTCCTACGATGAGGCAACAACACAACTTGAAT GTTTTGTGCCTTTTTTCAGGGTTACTTTTTTGGTGACTATTGGGAAGACATTGGAACAATAAAATCGTTTTACGATGCTA ACATGGCTCTTACTGAAGAGGTGGGTTAAAGATATTTACAGTTGGAAAATTTCTAATATAATGTTTTTCCTCTGATACCA TGCATTAGTCACAAGCCAAAATATCAAAGATGCACTAATGACACTATGACATAGTTACAATGACACTATGAACTCAAATA GCTACTAGAATGTAGTAGCAATTTGTAGGAGAAGCTAATCTGTTTTATGTTACCCTCTAGCAGAATCCAATGTTCAAATT TTATGATCCCAAGACGCCCATTTACACATCTCCAAGATTCTTGCCACCAACAAAGATTGATAAATGCCGGGTATGGCTAT GATCACTCATTTCAGAAGCTCTCTCTTAATTTAATAACATGTCTTGCTTATCATATTTGAGTTCCTCTTGCAGATTGTGG ATGCAATAATTTCCCATGGATGTTTCCTGAGAGAAAGTAGTGTCCAACACTCCATTGTGGGTGAACGTTCACGTTTGGAT TATGGCGTTGAGCTCCGGGTAAACTACCATAATTTCTAGACCAAGGACACTAGAATTCTCTAATTAAAATTCCTACCATC TAAGATCTCATTTTACAGGACACTATAATGATGGGAGCAGACTATTACCAAACTGAATCCGAAATCGCTTCCCTGCTAGC AGAGGGGAAGGTTCCCATTGGGATCGGAAAGAACACCAAAATTAGGTAATCATACTAGCAGTTACTACATCCTAACATGG ATAGCTAGACCACCTAATTCAATATGTTGGTTTTTGCATGAACCAACTATCTCAAAAGCTTAAGTTATTAGGTAAAGACG TATACTGATTTTATATTATATTTCTAACACGTTCTCTCACGCTAAAACACATTAGGCTTGAACTCTAATGCCATGTTATG GACCAATTATTCTAAAAGTCTAAGTTAGTTGAGTAGGGTGAAGATGTATCATATATGAATGATTTTGTGTTATATTTCTA TCAGTTTTGAAACTTAAAACTTAAAAGTAAATACAAATAGTGCCTTTACCATGATGATAAAGAATTAGATTAGCATTTAG AATCTTCATGTTATAATTGTTATTTGTGTCTTTGTTGAAGGAAATGTATAATTGACAAGAATGCAAAGATTGGGAAAGAT GTCATCATCATGAACAAAGATGTGAGCATGGCTGCCCCCTATCTTCTTTTTTTACACAACTCATTACCCTTCATTAGTTC TTAGTTATAAGTATCAAGTTATCTATGAATAGTTTATCACCATTCAAATGCTTTGAGTTGAGTGTAGGGTGTGCAAGAAG CAGATAGAGCAGAGGATGGATTCTACATTAGATCAGGAATCCCTATCATAATGGAGAAGGCAACAATAGAAGATGGAAGA GTGATATAA
CDS sequence (LotjaGi3g1v0509800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTACATGGACCTTGTGCAGAGTCATGTAGACAGAAATGCAGATATTACAGTATCATGTGCTGCAGTGGATGACAG TCGAGCATCAGATTATGGATTGGTCAAGGTAGATGGCAGAGGCCGCATCATCCAATTTTCAGAAAAACCGAAGGGTTCTG ATCTGAAAGAAATGCAAGTAGATACCTCTCTTTTTGGCTTGTCACCTCAAGAAGCATTAAAGTCACCATATATTGCATCT ATGGGGGTTTATGTATTCAAGACGGATGTTTTACTTAACCTTCTAAAATGGAGATATCCTACTTCGAATGACTTTGGATC TGAAATCATTCCTGCAGCTGTGAAGGAATACAATGTCCAAGGTTACTTTTTTGGTGACTATTGGGAAGACATTGGAACAA TAAAATCGTTTTACGATGCTAACATGGCTCTTACTGAAGAGAATCCAATGTTCAAATTTTATGATCCCAAGACGCCCATT TACACATCTCCAAGATTCTTGCCACCAACAAAGATTGATAAATGCCGGATTGTGGATGCAATAATTTCCCATGGATGTTT CCTGAGAGAAAGTAGTGTCCAACACTCCATTGTGGGTGAACGTTCACGTTTGGATTATGGCGTTGAGCTCCGGGACACTA TAATGATGGGAGCAGACTATTACCAAACTGAATCCGAAATCGCTTCCCTGCTAGCAGAGGGGAAGGTTCCCATTGGGATC GGAAAGAACACCAAAATTAGGAAATGTATAATTGACAAGAATGCAAAGATTGGGAAAGATGTCATCATCATGAACAAAGA TGGTGTGCAAGAAGCAGATAGAGCAGAGGATGGATTCTACATTAGATCAGGAATCCCTATCATAATGGAGAAGGCAACAA TAGAAGATGGAAGAGTGATATAA
Protein sequence (LotjaGi3g1v0509800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYMDLVQSHVDRNADITVSCAAVDDSRASDYGLVKVDGRGRIIQFSEKPKGSDLKEMQVDTSLFGLSPQEALKSPYIAS MGVYVFKTDVLLNLLKWRYPTSNDFGSEIIPAAVKEYNVQGYFFGDYWEDIGTIKSFYDANMALTEENPMFKFYDPKTPI YTSPRFLPPTKIDKCRIVDAIISHGCFLRESSVQHSIVGERSRLDYGVELRDTIMMGADYYQTESEIASLLAEGKVPIGI GKNTKIRKCIIDKNAKIGKDVIIMNKDGVQEADRAEDGFYIRSGIPIIMEKATIEDGRVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 300 | 300 | 3.4E-195 | – | |
| PANTHER | 1 | 300 | 300 | 3.4E-195 | – | |
| Pfam | 1 | 146 | 146 | 3.1E-35 | ||
| SUPERFAMILY | 1 | 261 | 261 | 6.52E-38 | ||
| Gene3D | 1 | 165 | 165 | 1.7E-50 | ||
| ProSitePatterns | 79 | 89 | 11 | - | ||
| SUPERFAMILY | 162 | 300 | 139 | 2.83E-24 | ||
| Gene3D | 166 | 300 | 135 | 3.6E-48 | – | |
| CDD | 168 | 294 | 127 | 4.89342E-26 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Glycogen biosynthetic process | The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues. | ||
| Molecular function | Glucose-1-phosphate adenylyltransferase activity | Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = ADP-glucose + diphosphate. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Nucleotidyltransferase activity | Catalysis of the transfer of a nucleotidyl group to a reactant. |
Expression pattern of LotjaGi3g1v0509800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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