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IPR011004

Description

IPR011004 is a Trimeric LpxA-like superfamily.

<p>This domain superfamily is characterised by trimeric LpxA-like enzymes that display a single-stranded left-handed β-helix fold, composed of tandem repeats of a hexapeptide, as represented by the Bacterial transferase hexapeptide repeat, where the hexapeptide repeats correspond to individual strands. Many bacterial transferases contain this domain. The structures of several proteins with this domain have been determined, including UDP N-acetylglucosamine acyltransferase (LpxA, [ec:2.3.1.129]) from Escherichia coli, the first enzyme in the lipid A biosynthetic pathway [[cite:PUB00005215]]; galactoside acetyltransferase (GAT, LacA, [ec:2.3.1.18]) from E. coli, a gene product of the lac operon that may assist cellular detoxification [[cite:PUB00013969]]; gamma-class Archaeon carbonic anhydrase ([ec:4.2.1.1]), a zinc-containing enzyme that catalyses the reversible hydration of carbon dioxide [[cite:PUB00013970]]; tetrahydrodipicolinate-N-succinlytransferase (DapD) from Mycobacterium bovis, an enzyme from the lysine biosynthetic pathway that contains an extra N-terminal 3-helical domain [[cite:PUB00013971]]; and the C-terminal domain of N-acetylglucosamine 1-phosphate uridyltransferase (GlmU, [ec:2.7.7.23]) from E. coli, a trimeric bifunctional enzyme that catalyses the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine, an essential precursor for many biomolecules [[cite:PUB00007906]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 67

Transcript Name Description Predicted domains Domain count
PREDICTED: UDP-3-O-[3]-hydroxymyristoyl] gi|356495807|ref|XP_003516764.1| 4
PREDICTED: translation initiation factor eIF-2B subunit epsilon-like [Cicer arietinum] gi|502124571|ref|XP_004498583.1| 24
Bifunctional protein aas [Medicago truncatula] gi|357454395|ref|XP_003597478.1| 32
30
26
Bifunctional protein aas [Medicago truncatula] gi|357454395|ref|XP_003597478.1| 11
PREDICTED: serine acetyltransferase 3, mitochondrial-like [Cicer arietinum] gi|502099520|ref|XP_004491499.1| 16
PREDICTED: mannose-1-phosphate guanyltransferase alpha-like [Cicer arietinum] gi|502133994|ref|XP_004501963.1| 7
PREDICTED: gamma carbonic anhydrase 1, mitochondrial-like [Cucumis sativus] gi|449469963|ref|XP_004152688.1| 8
PREDICTED: glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic-like [Glycine max] gi|356518710|ref|XP_003528021.1| 18
PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1-like [Glycine max] gi|356517038|ref|XP_003527197.1| 17
PREDICTED: UDP-3-O-[3]-hydroxymyristoyl] gi|356495807|ref|XP_003516764.1| 9
PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic-like [Glycine max] gi|356503982|ref|XP_003520778.1| 16
PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic-like [Glycine max] gi|356503982|ref|XP_003520778.1| 16
Glucose-1-phosphate adenylyltransferase [Medicago truncatula] gi|357511621|ref|XP_003626099.1| 5
PREDICTED: acyl-[acyl]-carrier-protein] gi|356523129|ref|XP_003530194.1| 12
Transcription factor APFI-like protein [Medicago truncatula] gi|357483549|ref|XP_003612061.1| 7
PREDICTED: gamma carbonic anhydrase 1, mitochondrial-like [Cicer arietinum] gi|502161184|ref|XP_004512067.1| 8
PREDICTED: probable mannose-1-phosphate guanylyltransferase 1-like [Brachypodium distachyon] gi|357112936|ref|XP_003558261.1| 7
Serine acetyltransferase [Medicago truncatula] gi|357494997|ref|XP_003617787.1| 10
PREDICTED: glucose-1-phosphate adenylyltransferase small subunit, chloroplastic-like isoform 1 [Glycine max] gi|356501685|ref|XP_003519654.1| 24
PREDICTED: serine acetyltransferase 5-like [Cicer arietinum] gi|502157027|ref|XP_004510733.1| 17
Bifunctional protein aas [Medicago truncatula] gi|357454395|ref|XP_003597478.1| 20
PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1-like [Glycine max] gi|356545193|ref|XP_003541029.1| 13
PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic-like [Cicer arietinum] gi|502149899|ref|XP_004507704.1| 18
PREDICTED: gamma carbonic anhydrase-like 2, mitochondrial-like [Cicer arietinum] gi|502139375|ref|XP_004503744.1| 9
PREDICTED: gamma carbonic anhydrase-like 2, mitochondrial-like [Cicer arietinum] gi|502139375|ref|XP_004503744.1| 5
PREDICTED: translation initiation factor eIF-2B subunit epsilon-like [Cicer arietinum] gi|502124571|ref|XP_004498583.1| 24
PREDICTED: serine acetyltransferase 3, mitochondrial-like [Cicer arietinum] gi|502146996|ref|XP_004506688.1| 17
PREDICTED: serine acetyltransferase 1, chloroplastic-like [Glycine max] gi|356524352|ref|XP_003530793.1| 14
Glucose-1-phosphate adenylyltransferase; TAIR: AT5G48300.1 ADP glucose pyrophosphorylase 1; Swiss-Prot: sp|Q9M462|GLGS_BRANA Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic; TrEMBL-Plants: tr|I3SW82|I3SW82_LOTJA Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0010500 25
Glucose-1-phosphate adenylyltransferase; TAIR: AT5G48300.1 ADP glucose pyrophosphorylase 1; Swiss-Prot: sp|Q9M462|GLGS_BRANA Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic; TrEMBL-Plants: tr|I3SW82|I3SW82_LOTJA Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0010500 25
Serine acetyltransferase; TAIR: AT3G13110.1 serine acetyltransferase 2;2; Swiss-Prot: sp|Q39218|SAT3_ARATH Serine acetyltransferase 3, mitochondrial; TrEMBL-Plants: tr|A0A1J7HSB9|A0A1J7HSB9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0017400 18
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; TAIR: AT1G19580.1 gamma carbonic anhydrase 1; Swiss-Prot: sp|Q9FWR5|GCA1_ARATH Gamma carbonic anhydrase 1, mitochondrial; TrEMBL-Plants: tr|I3T7V2|I3T7V2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0420300 8
Glucose-1-phosphate adenylyltransferase; TAIR: AT1G27680.1 ADPGLC-PPase large subunit; Swiss-Prot: sp|P55233|GLGL1_BETVU Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic; TrEMBL-Plants: tr|I3S8A5|I3S8A5_LOTJA Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0421100 18
Glucose-1-phosphate adenylyltransferase; TAIR: AT1G27680.1 ADPGLC-PPase large subunit; Swiss-Prot: sp|P55233|GLGL1_BETVU Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic; TrEMBL-Plants: tr|I3S8A5|I3S8A5_LOTJA Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0421100 7
UTP--glucose-1-phosphate uridylyltransferase; TAIR: AT3G03250.1 UDP-GLUCOSE PYROPHOSPHORYLASE 1; Swiss-Prot: sp|P19595|UGPA_SOLTU UTP--glucose-1-phosphate uridylyltransferase; TrEMBL-Plants: tr|A0A1J7IIE7|A0A1J7IIE7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0557100 7
Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1K764|I1K764_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0566100 18
Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1K764|I1K764_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0566100 14
Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1K764|I1K764_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0566100 14
Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1K764|I1K764_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0566100 7
Glucose-1-phosphate adenylyltransferase; TAIR: AT1G27680.1 ADPGLC-PPase large subunit; Swiss-Prot: sp|P55230|GLGL2_ARATH Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic; TrEMBL-Plants: tr|K7KGH6|K7KGH6_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0753300 17
Glucose-1-phosphate adenylyltransferase; TAIR: AT1G27680.1 ADPGLC-PPase large subunit; Swiss-Prot: sp|P55230|GLGL2_ARATH Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic; TrEMBL-Plants: tr|I1NBK6|I1NBK6_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0753300 17
Acyl-[acyl]-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; TAIR: AT4G29540.2 bacterial transferase hexapeptide repeat-containing protein; Swiss-Prot: sp|Q9SU91|LPXA_ARATH Probable acyl-[acyl]-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial; TrEMBL-Plants: tr|A0A072UJ42|A0A072UJ42_MEDTR UDP-N-acetylglucosamine acyltransferase; Found in the gene: LotjaGi2g1v0231800 12
Serine acetyltransferase; TAIR: AT4G35640.1 serine acetyltransferase 3;2; Swiss-Prot: sp|Q8W2B8|SAT4_ARATH Serine acetyltransferase 4; TrEMBL-Plants: tr|K7LNN3|K7LNN3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356400 18
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; TAIR: AT1G19580.1 gamma carbonic anhydrase 1; Swiss-Prot: sp|Q9FWR5|GCA1_ARATH Gamma carbonic anhydrase 1, mitochondrial; TrEMBL-Plants: tr|A0A151TIB2|A0A151TIB2_CAJCA Uncharacterized protein DDB-G0288155; Found in the gene: LotjaGi2g1v0387900 8
Long-chain-fatty-acid--AMP ligase FadD28; TAIR: AT1G77220.1 organic solute transporter ostalpha protein (DUF300); Swiss-Prot: sp|Q8YK97|LILIP_NOSS1 Linolenate 9R-lipoxygenase; TrEMBL-Plants: tr|A0A0B2RJD7|A0A0B2RJD7_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0292200 18
AMP-dependent synthetase and ligase family protein; TAIR: AT1G20480.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|B2HIM0|FAA28_MYCMM Long-chain-fatty-acid--AMP ligase FadD28; TrEMBL-Plants: tr|A0A0B2RJD7|A0A0B2RJD7_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0292200 48
Serine acetyltransferase; TAIR: AT5G56760.1 serine acetyltransferase 1;1; Swiss-Prot: sp|Q42538|SAT5_ARATH Serine acetyltransferase 5; TrEMBL-Plants: tr|A0A072TYU4|A0A072TYU4_MEDTR Serine acetyltransferase; Found in the gene: LotjaGi3g1v0392000 18
Serine acetyltransferase; TAIR: AT5G56760.1 serine acetyltransferase 1;1; Swiss-Prot: sp|Q42538|SAT5_ARATH Serine acetyltransferase 5; TrEMBL-Plants: tr|A0A072TYU4|A0A072TYU4_MEDTR Serine acetyltransferase; Found in the gene: LotjaGi3g1v0392000 18
Acyl-CoA ligase-like; TAIR: AT1G20480.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|B2HIM0|FAA28_MYCMM Long-chain-fatty-acid--AMP ligase FadD28; TrEMBL-Plants: tr|A0A0B2QZ83|A0A0B2QZ83_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0496500 29
Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 17
Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 13
Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LJC2|I1LJC2_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 6
Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 13
Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 17
Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 17
Glucose-1-phosphate adenylyltransferase; TAIR: AT5G19220.1 ADP glucose pyrophosphorylase large subunit 1; Swiss-Prot: sp|P55229|GLGL1_ARATH Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic; TrEMBL-Plants: tr|Q9AT08|Q9AT08_CICAR Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi4g1v0353300 14
Glucose-1-phosphate adenylyltransferase; TAIR: AT5G19220.1 ADP glucose pyrophosphorylase large subunit 1; Swiss-Prot: sp|P55229|GLGL1_ARATH Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic; TrEMBL-Plants: tr|Q9AT08|Q9AT08_CICAR Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi4g1v0353300 18
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; TAIR: AT5G63510.1 gamma carbonic anhydrase like 1; Swiss-Prot: sp|Q9FMV1|GCAL1_ARATH Gamma carbonic anhydrase-like 1, mitochondrial; TrEMBL-Plants: tr|I3RZK3|I3RZK3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0418000 11
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; TAIR: AT5G63510.1 gamma carbonic anhydrase like 1; Swiss-Prot: sp|Q9FMV1|GCAL1_ARATH Gamma carbonic anhydrase-like 1, mitochondrial; TrEMBL-Plants: tr|I3RZK3|I3RZK3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0418000 11
Glucose-1-phosphate adenylyltransferase; TAIR: AT1G27680.1 ADPGLC-PPase large subunit; Swiss-Prot: sp|P55230|GLGL2_ARATH Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7GSV3|A0A1J7GSV3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0013300 17
Translation initiation factor eIF-2B subunit epsilon; TAIR: AT2G34970.1 Trimeric LpxA-like enzyme; Swiss-Prot: sp|P56287|EI2BE_SCHPO Probable translation initiation factor eIF-2B subunit epsilon; TrEMBL-Plants: tr|V7BQ00|V7BQ00_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0309800 25
Translation initiation factor eIF-2B subunit epsilon; TAIR: AT2G34970.1 Trimeric LpxA-like enzyme; Swiss-Prot: sp|P56287|EI2BE_SCHPO Probable translation initiation factor eIF-2B subunit epsilon; TrEMBL-Plants: tr|V7BQ00|V7BQ00_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0309800 25
UTP--glucose-1-phosphate uridylyltransferase; TAIR: AT5G17310.1 UDP-glucose pyrophosphorylase 2; Swiss-Prot: sp|Q9LKG7|UGPA_ASTPN UTP--glucose-1-phosphate uridylyltransferase; TrEMBL-Plants: tr|I1LM73|I1LM73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051600 9
UTP--glucose-1-phosphate uridylyltransferase; TAIR: AT5G17310.2 UDP-glucose pyrophosphorylase 2; Swiss-Prot: sp|Q9SDX3|UGPA_MUSAC UTP--glucose-1-phosphate uridylyltransferase; TrEMBL-Plants: tr|I1LM73|I1LM73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051600 10
Serine acetyltransferase; TAIR: AT3G13110.1 serine acetyltransferase 2;2; Swiss-Prot: sp|Q39218|SAT3_ARATH Serine acetyltransferase 3, mitochondrial; TrEMBL-Plants: tr|V7BNI1|V7BNI1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0145100 18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 1.49