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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0520600 |
| Transcript ID | LotjaGi3g1v0520600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; TAIR: AT2G39445.1 Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit; Swiss-Prot: sp|O64792|PIGP_ARATH Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; TrEMBL-Plants: tr|I1M1H5|I1M1H5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0520600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93697602..93698964) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAAGTCCCCACTCTGTCAACAGTCCTAGAAGAACGCTCAGTTTGTCAAGACAGCGGAGGCCATATGCATCCTTTCC TGACCAAGATGACAAAACCTCTGGCTTTGGATTGTCTGGCGACCATGGTCCTAAGCCTTCTGAAGTTTATGGTTTTCTGG GATCCATAACCACTGTTGTTGCTTCAGGTTTTCTCTCCTTCCTGCTTTTCACAATTTCATATTCTCTCGTTTGACAAAAT ATCTCCTGTTTAATTATAAAAGTACTGATTAGTCCCCGTAGGAAGGATAGCTCAAGTGGTAGGAGATGGAGACATATGGA TTGGGTAGGGGAGGTCCAGTGATTGATTCCTGGCGGGTTCAAAAAAAATACTGATTATGATTAGTACAATACAAACTTTT TAAATCCAAATGTCTCAGATTTATTTTGATTTTCATATTGTATTTTATGTTTTTGATTTTCCTATGTCAACAGTTATTTT CTTGGTATGGGCATATGTTCCAGAATCATGGCTACATTCTATTGGCATCACTTACTATCCTAGCAGGTTCGACAGCTCAA CTCCTTTTAGTATTTTAAGCTTGGGCAATATCTTAGCTCTCTACCATATTGAATTGTTTGAGTACCCAAAATAAGAATTT TGCTTTGAAAAAAAACTATGGAGTGTTAATTTAAAGGTTGTAGTTGTACAAATGTCTTCTCAGTTATGGTGCATGGAATG GGCAAACAACTTAGCTGTAAAATCTAAGCAGAGATTTGGGAGAGGAATGGAGGGAGGTCAGCCAACTTTTTCATTCGGAG TGCTTAATAATTATGTAGAAAAGGATTGTAAATTTGAAAAACTCACATCAGTTTTCACTTTCAAGCTTCCAAATTTCAGG CTGGGGAAATCAGCTCAGACTTATGGAAATAACATTGTGAATCCAACTGTTCATGATAAATGATAGAAATAACTTTTGCT TTTCAGATATTGGGCTCTGGCAGTACCAACTTATGTGATGGTGAGCATTGTATTAATGCTGGGATTCTACATTGGTCTTA ACTTCATTTCAACTCCTTCTCCTGCATCTATATACACAGTTTTTGGTGAGTTTGCTACTGAATTCTTTAGTGATACTGGT GTGGTGAATTTCGATTGCTAGATTACTTCATTTGTTTCCTGCACATGTGTTCAGGATATAGTGCAATGTTTGTTAGTTGA AGTTTTTTGATTACTGATATGGACATATATTTGTTCAGATGAATTCAGTAGGGATCCTCTGAGTCTTGATTGCTCGCTAG CGGGAGAGGAGAAGCCTATCGACCCTATATCTGATATTGGTATTGACAGAATCAATGATGTTATGTTCAATAATGCGGCC TAA
CDS sequence (LotjaGi3g1v0520600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGTCCCCACTCTGTCAACAGTCCTAGAAGAACGCTCAGTTTGTCAAGACAGCGGAGGCCATATGCATCCTTTCC TGACCAAGATGACAAAACCTCTGGCTTTGGATTGTCTGGCGACCATGGTCCTAAGCCTTCTGAAGTTTATGGTTTTCTGG GATCCATAACCACTGTTGTTGCTTCAGTTATTTTCTTGGTATGGGCATATGTTCCAGAATCATGGCTACATTCTATTGGC ATCACTTACTATCCTAGCAGATATTGGGCTCTGGCAGTACCAACTTATGTGATGGTGAGCATTGTATTAATGCTGGGATT CTACATTGGTCTTAACTTCATTTCAACTCCTTCTCCTGCATCTATATACACAGTTTTTGATGAATTCAGTAGGGATCCTC TGAGTCTTGATTGCTCGCTAGCGGGAGAGGAGAAGCCTATCGACCCTATATCTGATATTGGTATTGACAGAATCAATGAT GTTATGTTCAATAATGCGGCCTAA
Protein sequence (LotjaGi3g1v0520600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESPHSVNSPRRTLSLSRQRRPYASFPDQDDKTSGFGLSGDHGPKPSEVYGFLGSITTVVASVIFLVWAYVPESWLHSIG ITYYPSRYWALAVPTYVMVSIVLMLGFYIGLNFISTPSPASIYTVFDEFSRDPLSLDCSLAGEEKPIDPISDIGIDRIND VMFNNAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 165 | 165 | 1.2E-86 | – | |
| MobiDBLite | 1 | 22 | 22 | - | – | |
| PANTHER | 1 | 165 | 165 | 1.2E-86 | – | |
| MobiDBLite | 1 | 42 | 42 | - | – | |
| Phobius | 1 | 48 | 48 | - | – | |
| Pfam | 47 | 163 | 117 | 1.3E-32 | ||
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 49 | 71 | 23 | - | – | |
| Phobius | 72 | 90 | 19 | - | – | |
| Phobius | 91 | 111 | 21 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 112 | 167 | 56 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0520600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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