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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0004400 |
| Transcript ID | LotjaGi4g1v0004400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent 6-phosphofructokinase; TAIR: AT5G47810.1 phosphofructokinase 2; Swiss-Prot: sp|Q9FIK0|PFKA2_ARATH ATP-dependent 6-phosphofructokinase 2; TrEMBL-Plants: tr|G7ZZU2|G7ZZU2_MEDTR ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0004400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:746617..747411) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGAGGGGCTGTGAAGATATTCAACGAAATACGGAACCGCAAACTGAATGTTGCAGTCGTTGGAATTCCTAAAACTGT GGACAATGATGTTGGAATAATTGACAGATCTTTTGGATTCCAAACAGCAGTTGAAATGGCTCAGCAGGCAATCAGTGCTG CTCATGTGGAGGCCGAGAGTGCAGTTAATGGCATAGGCCTGGTGAAGTTGATGGGTCGAAGCACGGGTCACATTGCTCTT CATGCAACACTCAGCAGCCGCGACGTCGATTGCTGCTTGATTCCTGAGATGGATTTTTACTTGGAAGGAAAAGGAGGGCT CTTTGAGTTTCTTGAACAACGACTGAAGTCAAATGGGCATGCAGTGCTTGTAGTTGCCGAGGGCGCCGGCCAGGACCTTA TACCCAGAAGCGAATCACAGAAGCAAGACCGGGATGAGTCTGGTAACATGGTGTTTTTAGATGTTGGTGCGTGGTTGAAG TCTGAGCTGAAGGACTGGTGGGATAGGGACCACCCTGGTGAGTTGTTCACTGTGAAGTACATTGATCCTACATACATGAT TCGTGCGGTTCATGCAAATGCTACTGATAACTTGTACTGTACACTCGTAGCGCACTCTGCAATTCATGGTGTCATGGCAG GGTATACTGGGTTTGTTGCTGGTCCTATCAATGGGAACTATGCATACATCCCATTAGAAGATGTAGCATGTGCAAATAAC CCTGTCAATACTAAAGATCATAGGTGGTCATGGGTGAGATCTGTCACCAATCAGCCTGATTTTGTAAGGAGCTAG
CDS sequence (LotjaGi4g1v0004400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGGGGCTGTGAAGATATTCAACGAAATACGGAACCGCAAACTGAATGTTGCAGTCGTTGGAATTCCTAAAACTGT GGACAATGATGTTGGAATAATTGACAGATCTTTTGGATTCCAAACAGCAGTTGAAATGGCTCAGCAGGCAATCAGTGCTG CTCATGTGGAGGCCGAGAGTGCAGTTAATGGCATAGGCCTGGTGAAGTTGATGGGTCGAAGCACGGGTCACATTGCTCTT CATGCAACACTCAGCAGCCGCGACGTCGATTGCTGCTTGATTCCTGAGATGGATTTTTACTTGGAAGGAAAAGGAGGGCT CTTTGAGTTTCTTGAACAACGACTGAAGTCAAATGGGCATGCAGTGCTTGTAGTTGCCGAGGGCGCCGGCCAGGACCTTA TACCCAGAAGCGAATCACAGAAGCAAGACCGGGATGAGTCTGGTAACATGGTGTTTTTAGATGTTGGTGCGTGGTTGAAG TCTGAGCTGAAGGACTGGTGGGATAGGGACCACCCTGGTGAGTTGTTCACTGTGAAGTACATTGATCCTACATACATGAT TCGTGCGGTTCATGCAAATGCTACTGATAACTTGTACTGTACACTCGTAGCGCACTCTGCAATTCATGGTGTCATGGCAG GGTATACTGGGTTTGTTGCTGGTCCTATCAATGGGAACTATGCATACATCCCATTAGAAGATGTAGCATGTGCAAATAAC CCTGTCAATACTAAAGATCATAGGTGGTCATGGGTGAGATCTGTCACCAATCAGCCTGATTTTGTAAGGAGCTAG
Protein sequence (LotjaGi4g1v0004400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGAVKIFNEIRNRKLNVAVVGIPKTVDNDVGIIDRSFGFQTAVEMAQQAISAAHVEAESAVNGIGLVKLMGRSTGHIAL HATLSSRDVDCCLIPEMDFYLEGKGGLFEFLEQRLKSNGHAVLVVAEGAGQDLIPRSESQKQDRDESGNMVFLDVGAWLK SELKDWWDRDHPGELFTVKYIDPTYMIRAVHANATDNLYCTLVAHSAIHGVMAGYTGFVAGPINGNYAYIPLEDVACANN PVNTKDHRWSWVRSVTNQPDFVRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 264 | 264 | 4.3E-175 | – | |
| PANTHER | 1 | 264 | 264 | 4.3E-175 | – | |
| SUPERFAMILY | 1 | 261 | 261 | 6.41E-73 | ||
| Pfam | 3 | 209 | 207 | 1.4E-30 | ||
| PRINTS | 21 | 38 | 18 | 2.5E-9 | ||
| PRINTS | 39 | 57 | 19 | 2.5E-9 | ||
| Gene3D | 40 | 204 | 165 | 2.8E-46 | – | |
| PRINTS | 60 | 76 | 17 | 2.5E-9 | ||
| PRINTS | 117 | 129 | 13 | 2.5E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 6-phosphofructokinase activity | Catalysis of the reaction: ATP + D-fructose-6-phosphate = ADP + D-fructose 1,6-bisphosphate. | ||
| Biological process | Fructose 6-phosphate metabolic process | The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism. | ||
| Biological process | Glycolytic process | The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules. |
Expression pattern of LotjaGi4g1v0004400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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