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LotjaGi4g1v0083900.5

Overview

Field Value
Gene ID LotjaGi4g1v0083900
Transcript ID LotjaGi4g1v0083900.5
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Glutathione S-transferase-like protein; TAIR: AT4G19880.1 Glutathione S-transferase family protein; Swiss-Prot: sp|P42620|YQJG_ECOLI Glutathionyl-hydroquinone reductase YqjG; TrEMBL-Plants: tr|I3S077|I3S077_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0083900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:11022469..11024640) extracted from Lotus japonicus Gifu genome v1.2.

AGAATATGCTTATCTTTAAAATTCTTTTCAAATTCATTATGTGGCATGATCCATGGCTGTGCTAGATATATTGAAGTATA TTTCTTTTTGAGCTAAGTTTTCCTGTGTATCATCTTATATTTTGAAGGTTTTGTGATTCATTCTTAAAATATCTACTGCG TAGCATATTGTTGAAATGGTGCGATCTTCATTGGATGAGATATCAGACACGGGCGCATTTGTGAGATCTGCTTCCTCATT CCGACAATTTGTTTCAAGGGACCCAAATTCCCAATTTCCAGCAGAGTCGGGAAGATATCATCTCTATATATCATATGCTT GTCCTTGGGCTTGCAGGTGCCTTGCTTACTTGTATATCAAAGGACTTGACAAAGCCATCAGTGTCACGGTTAGTAGGTTT CGAACTGAATATTTTCAAGTAGAATGATTAGAATAGTTCCTACCTGAATTTCATATCTTACTTGTTTATTTACAGTCAGT CAAGCCCATTTGGGGAAGTATTACAGAATCTGGTGAATTTATGGGATGGGTTTTTCCTGATACAAAAACTGAGGTTCTAG GAGCTGAACCTGATCCATTGAATGGAGCAAAGTCCATTAGGGAAATTTATGAAATTGCAAGTACAAACTATGCTGGAAAG TACACTGTTCCTGTATGTTTCTCTTTAGAATAGACTCGTTTCTTTCTTGGCTTTGAAGATTTGATTTACTGAGGAGATGT TTATTATTAACTGATGGATTTTTGGCCTGCTCAGATTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCT CAGAGATAATTCGCATGTTTAACACTGAATTCAACAACATCGCAGAAAATCCCACCTTGGACTTATATCCTGCTGATTTG AGAGCCCAAATTGATGAGACTAATGAGTGGATATATGATTCGATAAATAACGGTGTTTATAAATGTGGGTTTGCAAAGAA GCAAGAACCATACAACGATGTATGTAGTTATTCTTAACTATTTTAGGGAAGTTGACACTTTGGTGTTTACATTCATTAAA AGGCTGCTGTGCTTTGGCATTTGAAACTGTTTACATGGTCCTTTGTGCAGGCTGCAAGACGATTGTATGAAGCTTTGGAC AAATGTGAAACTATACTAAGCAAGCAACGCTATTTATGTGGCAACACACTTACTGAAGCAGACATTCGTTTGTTTGTCAC TCTCATCAGATTTGATGAGGTATAGTATGAGTTTGACTGTGTGTATTTTTTAGCATTTTTTCTTACCTTATGTGCATTCT TTTACATATATCATGCAAACCTTCTACTCAGTGAAGCATCACATTGAGTAAGAGTCTCCTTTTAGAACTCAATTAAATGA AATCACAGGTAAGAAGTTAGTGAATGGAGAGCTGGGATCGCGGTGGCTTTCATAAACCAATATTTATCCTTAGTTTTAAG ACTATATTTCTTGTAAAAATATGGAGTTTGTCCTGGCTAATTTCATTCTTTTGAACAATTTAAAACTCATTATTCTATAC ATAAAAAGTCACTGAAGTTTGTTCCATAGATTTTGGTTGGATATAGCTGGCGAAACTTTCTGATACTACAGTGATATATC TTCTGAGCTTTTCCTTCTTATTTGTTATTAAGTGAATGCTACTTCGTAAAAGAACATGCTAAAGGGAAACAGTCTGACGT GGAACTGAAAACTTAAAGCATTTTCTCTATTCTTTTTGTGCTTTAATTATATATCTCCGAAACATTTTGATGGTAATACT TAATAGAGCAATAAACATGAATTAGGGAGATAGTCTCATTGTATGACTGTTGGCCTTATAATTAAGTTTGCTTCTGATAT CATGTGCTTTTCTACTTTCCTATTTTAGGACTCATTTTACTTTCTACCCATTGAAATGTTTTAACTTTCGACTAATTATG GCTATTGTTGTAATTTAGGTATATGCAGTTCACTTTAAGTGCAACAAGAAGCTACTGCGGGAATACCCAAATCTCTTCAA CTATGTTAAAGACATTTTCCAAATTCCTGGCGTTAGTAACACAGTGAACATGGAACATATAAAGTTGCATTACTATGGTA GCCATCCTTCTATCAATCCATTTGCAATTGTTCCTGCAGGGCCAAATATTGATTACTCCGCTCCTCATGACAGAGAAAGG TTTTCTGCTTAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0083900.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATCCATGGCTGTGCTAGATATATTGAACATATTGTTGAAATGGTGCGATCTTCATTGGATGAGATATCAGACACGGG CGCATTTGTGAGATCTGCTTCCTCATTCCGACAATTTGTTTCAAGGGACCCAAATTCCCAATTTCCAGCAGAGTCGGGAA GATATCATCTCTATATATCATATGCTTGTCCTTGGGCTTGCAGGTGCCTTGCTTACTTGTATATCAAAGGACTTGACAAA GCCATCAGTGTCACGTCAGTCAAGCCCATTTGGGGAAGTATTACAGAATCTGGTGAATTTATGGGATGGGTTTTTCCTGA TACAAAAACTGAGGTTCTAGGAGCTGAACCTGATCCATTGAATGGAGCAAAGTCCATTAGGGAAATTTATGAAATTGCAA GTACAAACTATGCTGGAAAGTACACTGTTCCTATTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCA GAGATAATTCGCATGTTTAACACTGAATTCAACAACATCGCAGAAAATCCCACCTTGGACTTATATCCTGCTGATTTGAG AGCCCAAATTGATGAGACTAATGAGTGGATATATGATTCGATAAATAACGGTGTTTATAAATGTGGGTTTGCAAAGAAGC AAGAACCATACAACGATGCTGCAAGACGATTGTATGAAGCTTTGGACAAATGTGAAACTATACTAAGCAAGCAACGCTAT TTATGTGGCAACACACTTACTGAAGCAGACATTCGTTTGTTTGTCACTCTCATCAGATTTGATGAGGTATATGCAGTTCA CTTTAAGTGCAACAAGAAGCTACTGCGGGAATACCCAAATCTCTTCAACTATGTTAAAGACATTTTCCAAATTCCTGGCG TTAGTAACACAGTGAACATGGAACATATAAAGTTGCATTACTATGGTAGCCATCCTTCTATCAATCCATTTGCAATTGTT CCTGCAGGGCCAAATATTGATTACTCCGCTCCTCATGACAGAGAAAGGTTTTCTGCTTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0083900.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIHGCARYIEHIVEMVRSSLDEISDTGAFVRSASSFRQFVSRDPNSQFPAESGRYHLYISYACPWACRCLAYLYIKGLDK AISVTSVKPIWGSITESGEFMGWVFPDTKTEVLGAEPDPLNGAKSIREIYEIASTNYAGKYTVPILWDKKLKTIVNNESS EIIRMFNTEFNNIAENPTLDLYPADLRAQIDETNEWIYDSINNGVYKCGFAKKQEPYNDAARRLYEALDKCETILSKQRY LCGNTLTEADIRLFVTLIRFDEVYAVHFKCNKKLLREYPNLFNYVKDIFQIPGVSNTVNMEHIKLHYYGSHPSINPFAIV PAGPNIDYSAPHDRERFSA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF015753
11 335 325 4.0E-130
IPR016639
Gene3D
G3DSA:3.40.30.130
12 189 178 5.0E-63 –
PANTHER
PTHR32419
15 338 324 1.2E-184
IPR016639
PANTHER
PTHR32419:SF28
15 338 324 1.2E-184 –
SFLD
SFLDG01206
21 337 317 0.0 –
SFLD
SFLDG01148
21 337 317 0.0 –
SUPERFAMILY
SSF52833
37 172 136 3.41E-12
IPR036249
Pfam
PF13409
62 169 108 2.0E-16
IPR004045
SUPERFAMILY
SSF47616
176 313 138 7.94E-39
IPR036282
ProSiteProfiles
PS50405
183 307 125 15.511
IPR010987
CDD
cd03190
183 324 142 2.81555E-87 –
Gene3D
G3DSA:1.20.1050.10
190 339 150 6.7E-70 –
Pfam
PF13410
218 286 69 1.1E-10 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004364
Molecular function Glutathione transferase activity Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0083900.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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