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LotjaGi4g1v0083900.6

Overview

Field Value
Gene ID LotjaGi4g1v0083900
Transcript ID LotjaGi4g1v0083900.6
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Glutathione S-transferase-like protein; TAIR: AT4G19880.2 Glutathione S-transferase family protein; Swiss-Prot: sp|P42620|YQJG_ECOLI Glutathionyl-hydroquinone reductase YqjG; TrEMBL-Plants: tr|I3S9Z3|I3S9Z3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0083900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:11022644..11023883) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTGCGATCTTCATTGGATGAGATATCAGACACGGGCGCATTTGTGAGATCTGCTTCCTCATTCCGACAATTTGTTTC AAGGGACCCAAATTCCCAATTTCCAGCAGAGTCGGGAAGATATCATCTCTATATATCATATGCTTGTCCTTGGGCTTGCA GGTGCCTTGCTTACTTGTATATCAAAGGACTTGACAAAGCCATCAGTGTCACGGTTAGTAGGTTTCGAACTGAATATTTT CAAGTAGAATGATTAGAATAGTTCCTACCTGAATTTCATATCTTACTTGTTTATTTACAGTCAGTCAAGCCCATTTGGGG AAGTATTACAGAATCTGGTGAATTTATGGGATGGGTTTTTCCTGATACAAAAACTGAGGTTCTAGGAGCTGAACCTGATC CATTGAATGGAGCAAAGTCCATTAGGGAAATTTATGAAATTGCAAGTACAAACTATGCTGGAAAGTACACTGTTCCTGTA TGTTTCTCTTTAGAATAGACTCGTTTCTTTCTTGGCTTTGAAGATTTGATTTACTGAGGAGATGTTTATTATTAACTGAT GGATTTTTGGCCTGCTCAGATTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAGATAATTCGCA TGTTTAACACTGAATTCAACAACATCGCAGAAAATCCCACCTTGGACTTATATCCTGCTGATTTGAGAGCCCAAATTGAT GAGACTAATGAGTGGATATATGATTCGATAAATAACGGTGTTTATAAATGTGGGTTTGCAAAGAAGCAAGAACCATACAA CGATGTATGTAGTTATTCTTAACTATTTTAGGGAAGTTGACACTTTGGTGTTTACATTCATTAAAAGGCTGCTGTGCTTT GGCATTTGAAACTGTTTACATGGTCCTTTGTGCAGGCTGCAAGACGATTGTATGAAGCTTTGGACAAATGTGAAACTATA CTAAGCAAGCAACGCTATTTATGTGGCAACACACTTACTGAAGCAGACATTCGTTTGTTTGTCACTCTCATCAGATTTGA TGAGGTATAGTATGAGTTTGACTGTGTGTATTTTTTAGCATTTTTTCTTACCTTATGTGCATTCTTTTACATATATCATG CAAACCTTCTACTCAGTGAAGCATCACATTGAGTAAGAGTCTCCTTTTAGAACTCAATTAAATGAAATCACAGGTAAGAA GTTAGTGAATGGAGAGCTGGGATCGCGGTGGCTTTCATAA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0083900.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGCGATCTTCATTGGATGAGATATCAGACACGGGCGCATTTGTGAGATCTGCTTCCTCATTCCGACAATTTGTTTC AAGGGACCCAAATTCCCAATTTCCAGCAGAGTCGGGAAGATATCATCTCTATATATCATATGCTTGTCCTTGGGCTTGCA GGTGCCTTGCTTACTTGTATATCAAAGGACTTGACAAAGCCATCAGTGTCACGTCAGTCAAGCCCATTTGGGGAAGTATT ACAGAATCTGGTGAATTTATGGGATGGGTTTTTCCTGATACAAAAACTGAGGTTCTAGGAGCTGAACCTGATCCATTGAA TGGAGCAAAGTCCATTAGGGAAATTTATGAAATTGCAAGTACAAACTATGCTGGAAAGTACACTGTTCCTATTCTGTGGG ATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAGATAATTCGCATGTTTAACACTGAATTCAACAACATCGCA GAAAATCCCACCTTGGACTTATATCCTGCTGATTTGAGAGCCCAAATTGATGAGACTAATGAGTGGATATATGATTCGAT AAATAACGGTGTTTATAAATGTGGGTTTGCAAAGAAGCAAGAACCATACAACGATGCTGCAAGACGATTGTATGAAGCTT TGGACAAATGTGAAACTATACTAAGCAAGCAACGCTATTTATGTGGCAACACACTTACTGAAGCAGACATTCGTTTGTTT GTCACTCTCATCAGATTTGATGAGGTAAGAAGTTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0083900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVRSSLDEISDTGAFVRSASSFRQFVSRDPNSQFPAESGRYHLYISYACPWACRCLAYLYIKGLDKAISVTSVKPIWGSI TESGEFMGWVFPDTKTEVLGAEPDPLNGAKSIREIYEIASTNYAGKYTVPILWDKKLKTIVNNESSEIIRMFNTEFNNIA ENPTLDLYPADLRAQIDETNEWIYDSINNGVYKCGFAKKQEPYNDAARRLYEALDKCETILSKQRYLCGNTLTEADIRLF VTLIRFDEVRS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32419:SF28
1 249 249 2.5E-135 –
PANTHER
PTHR32419
1 249 249 2.5E-135
IPR016639
Gene3D
G3DSA:3.40.30.130
3 170 168 2.8E-63 –
SUPERFAMILY
SSF52833
23 158 136 1.66E-12
IPR036249
Pfam
PF13409
48 155 108 1.0E-16
IPR004045
SUPERFAMILY
SSF47616
162 249 88 4.04E-24
IPR036282
ProSiteProfiles
PS50405
169 251 83 11.991
IPR010987
Gene3D
G3DSA:1.20.1050.10
171 251 81 4.8E-36 –
Pfam
PF13410
204 247 44 3.0E-8 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004364
Molecular function Glutathione transferase activity Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0083900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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