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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0141200 |
| Transcript ID | LotjaGi4g1v0141200.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Subtilisin-like protease; TAIR: AT3G14240.1 Subtilase family protein; Swiss-Prot: sp|Q9LUM3|SBT15_ARATH Subtilisin-like protease SBT1.5; TrEMBL-Plants: tr|A0A072U3E3|A0A072U3E3_MEDTR Subtilisin-like serine protease; Found in the gene: LotjaGi4g1v0141200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:21510376..21511853) extracted from Lotus japonicus Gifu genome v1.2.
GGGAAGCATTCAATGCCTCATCTTGCAACAGGTTTGTGGTTGAATTGAAACTTGAAACCTTATCCTTGTCTGTTTTCACT TCATGAGAATTAGTTTTCACTTGGTTTATCTACATTGGTTAATAATTTATGGAGCAGGAAAGTGATTGGAGCTAGATACT ACATGAGTGGATATGAAGCAGAGGAAGGATCAGATGCAAATGTCTCCACCTTCAGATCCCCAAGGGACAGCACTGGCCAT GGGAGCCATACAGCCTCCATAGCCGCTGGGCGCTACGTGGCGAACATGAATTACAAGGGACTTGCAGCTGGAGGAGCCAG GGGAGGAGCACCAATGGCTAGGATTGCTGTGTACAAAACATGCTGGGATTCAGGTTGCTATGATGTGGATTTGCTAGCTG CATTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTCTCTTTGGGTGCTCAATCTCCCCAAGGAGACTATTTC AATGATGCAATTTCTGTTGGGTCATTCCATTCTGCTAGACGTGGAGTGATGGTTGTTGCTTCAGCTGGAAATGAAGGATT TGCTGGTTCTGCTACCAACCTTGCACCATGGATGCTCACTGTAGCTGCTAGCTCGACAGATAGGGAGTTCACTTCTGATA TCATACTAGGAAATGGGGCTAGAATCACGGTAAAGCTTATTAATTTTCTTTTCAAAATATAGACTCTGATGCTATCTTAG AATTCGGGTTAGACCTACCTTTATCCTGAAATTAGTTATTGGGGTAGTTAGATTTTCTGCAGTTTGAGGCATTAATTAGT TTTCTATGATTGATTGAACAGGGTGAAAGTTTGAGTCTCTTTGAAATGAATGTCTCCACAAGAATAATATCTGCCTCTCA AGCCTATGCAGGATACTTTACTCCTTACCAATCCAGGTGAAACAAGGTACTTAATTGTGAGGACTACCTAAAAGTCAATG CAAAATGATGAGTTTTTAAGGTATATTTTTTTCTCTTGTATTTGCTTTTGTAGTTACTGTCTGGAGAGTTCTTTGAATAA AACAAAGACCAAAGGGAAGGTTCTGGTGTGTAGACATGTGGAGACTTCAACAGAGTCAAAGGTTGCAAAGAGCAAAATAG TGAAAGAGGCTGGTGGAGTTGGTATGATACTCATTGATGAGACAGATCAAGATGTTGCTATCCCATTCATGATCCCTTCA GCTATTGTTGGAAAGAAAAAAGGAGAAAAGCTTCTATCCTATATAAAGACTACACGGTTTGTTTCATATTTGAGAGGGAA AAAAAGTGAATACTGTAAAGAACTTTTGTTTTTAGTGCCATTTTCTGAAGTCTAACAAGACATGCCTGGTATATGCTGAA CAGTAACCCTGTTGCAAGGATATTCAGAGCAAAAACAGTACTTGGAGCTCAGCCTGCACCTCGTGTAGCATCATTTTCTT CTAAAGGCCCCAATGCTTTAAACCCAGAAATTATGAAG
CDS sequence (LotjaGi4g1v0141200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGGATATGAAGCAGAGGAAGGATCAGATGCAAATGTCTCCACCTTCAGATCCCCAAGGGACAGCACTGGCCATGG GAGCCATACAGCCTCCATAGCCGCTGGGCGCTACGTGGCGAACATGAATTACAAGGGACTTGCAGCTGGAGGAGCCAGGG GAGGAGCACCAATGGCTAGGATTGCTGTGTACAAAACATGCTGGGATTCAGGTTGCTATGATGTGGATTTGCTAGCTGCA TTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTCTCTTTGGGTGCTCAATCTCCCCAAGGAGACTATTTCAA TGATGCAATTTCTGTTGGGTCATTCCATTCTGCTAGACGTGGAGTGATGGTTGTTGCTTCAGCTGGAAATGAAGGATTTG CTGGTTCTGCTACCAACCTTGCACCATGGATGCTCACTGTAGCTGCTAGCTCGACAGATAGGGAGTTCACTTCTGATATC ATACTAGGAAATGGGGCTAGAATCACGGGTGAAAGTTTGAGTCTCTTTGAAATGAATGTCTCCACAAGAATAATATCTGC CTCTCAAGCCTATGCAGGATACTTTACTCCTTACCAATCCAGTTACTGTCTGGAGAGTTCTTTGAATAAAACAAAGACCA AAGGGAAGGTTCTGGTGTGTAGACATGTGGAGACTTCAACAGAGTCAAAGGTTGCAAAGAGCAAAATAGTGAAAGAGGCT GGTGGAGTTGGTATGATACTCATTGATGAGACAGATCAAGATGTTGCTATCCCATTCATGATCCCTTCAGCTATTGTTGG AAAGAAAAAAGGAGAAAAGCTTCTATCCTATATAAAGACTACACGGTTTGTTTCATATTTGAGAGGGAAAAAAAGTGAAT ACTGTAAAGAACTTTTGTTTTTAGTGCCATTTTCTGAAGTCTAA
Protein sequence (LotjaGi4g1v0141200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGYEAEEGSDANVSTFRSPRDSTGHGSHTASIAAGRYVANMNYKGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAA FDDAIRDGVHILSLSLGAQSPQGDYFNDAISVGSFHSARRGVMVVASAGNEGFAGSATNLAPWMLTVAASSTDREFTSDI ILGNGARITGESLSLFEMNVSTRIISASQAYAGYFTPYQSSYCLESSLNKTKTKGKVLVCRHVETSTESKVAKSKIVKEA GGVGMILIDETDQDVAIPFMIPSAIVGKKKGEKLLSYIKTTRFVSYLRGKKSEYCKELLFLVPFSEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| PANTHER | 1 | 283 | 283 | 1.8E-147 | – | |
| ProSiteProfiles | 1 | 307 | 307 | 15.706 | – | |
| PANTHER | 1 | 283 | 283 | 1.8E-147 | – | |
| Gene3D | 8 | 152 | 145 | 1.4E-83 | ||
| Pfam | 11 | 157 | 147 | 8.1E-17 | ||
| MobiDBLite | 12 | 29 | 18 | - | – | |
| SUPERFAMILY | 13 | 174 | 162 | 1.18E-31 | ||
| Gene3D | 153 | 282 | 130 | 1.4E-83 | – | |
| CDD | 159 | 283 | 125 | 6.07609E-27 | – | |
| Pfam | 191 | 274 | 84 | 5.6E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi4g1v0141200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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