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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0141200 |
| Transcript ID | LotjaGi4g1v0141200.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Subtilisin-like protease; TAIR: AT2G04160.1 Subtilisin-like serine endopeptidase family protein; Swiss-Prot: sp|Q9ZSP5|AIR3_ARATH Subtilisin-like protease SBT5.3; TrEMBL-Plants: tr|I1L4M7|I1L4M7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0141200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:21508625..21513806) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTTGTTGTTATATGAAAACCTGGTTGAATATTAACATGACACCAACCAATATAGTACCTCAACCATGATTCTCTCCC TTCTCTTTTTCCATTTGGGCTTTCTTTAAAGATTTAATTTTCACCCTCAAAATCCTGAATTGGTTGCCTTGACATTTGTC TGCACCCTCACACTCTCTCTCTCTCTTATAAAACCCAGTTCTCATTTCCTATCCGCACTGTCACTACATGCCAATACACT GCTTCTAGTCACCAAAGGTTGAGACTTTACCAATGTCTTCCTCTACTTATGCTATGAGGAACACCCTTTGGTATCTTTTG TGTCTTGGTGTGCTGGTTGCAAACGTTAGCTTTTGCTTTGCTTCCAAGGTAGCATTTTTGTCTAGCATTTTGGTTATTGG TTATGGCTATTTCTTGGTTTTTGGGGTTTCTTAAGTGGAATCTGGATTGGATTGCAGGTTTATGTAGTGTACATGGGAAG CAAAACTGGTGAACACCCGGATGATATTTTGAAGGAAAATCATCAAATGCTTGCTTCTGTTCACAGTGGAAGGTCAGAGT CAATAGCATTTTTTCATTTTTTTTTTAACTCCCATTATCTTAGAAAAGTGATTTTCTCATTTCACTTTGGGAATGTTTCT ACAGCACTGAGCAAGCCCAAGCTTCTCATATTTATACTTACAGACATGGTTTCAGAGGATTTGCAGCCAAGCTCAATGAT GAACAGGCTTCCCAAATTTCTAGTAATTTTCTTTTCCATTTCCTTTTCCAACTTCTCAATGTTCAAATTAGTGTTAGCAC ATTATGCTAGTAATGTAGCTTGACTTGTATCAATGTTGAAATTTGACCAGAAATGCCAGGAGTGGTTTCTGTTTTCCCCA ATACTAGAAGAAAGCTGCACACAACTCATTCATGGGATTTCATGGGGCTTCTTGACGACCAAACCATGGAGACTCTGGGA TACTCCATCAGAAACCAAGAAAACATCATCATTGGTTTCATTGATACCGGTTAGTAAGTCTATGCAGCAATAAATGGTTT AGCCGTTTAGGCACAACATCATCATCATCATCACCATGTATAGTAAAGTTTCAGCCTTTAGGATAAGTTGATGGCTTCTA TTTATGCAGCAATCCCTCTATCCCATGTTTTAGTCATATAAGTCCCACAATGGCATTTATTCATCGGTTCAGTCAGAAGA ATTTCCACTTTCACACTGCATTTATTACTTCACTAACAAATAGTACTCTATCACTTTATTTCTCTTATTTTAGCAGTAGT AAGCTTAAGGAAAGTATGACTAATAAAACTGGAAATTTGACTTCAAATTACATCTTTATGGTGTTCAAATTCTTAAAAAA TCATGTTCTCTAGAGTTAAAACTGAATATGACAAATGTTTTTATTCATCTCCTGTTTTGTTGGTAGCTCAATTACCACAA GATATCAAATTTTTAGCATGTTTAGACCAGTTTCTCTTTCATCAGAATCAATTCTGAAACCATGAAGCTACTCACGGAAG CTTCTTCCTAGAATTGATTTTGACTTCAGAATCAATTGTATAAGTGAAAGATGGTTTAGGCACTGCGAAGTGAAAGTGCT CCACTGGTATGATAGTCCTCAAATTACTTGGATTTTGTCTGAGTTTTGTTCATAATCACTATTCATTCAGGAATTTGGCC GGAATCCCCAAGCTTCAGTGACACTGACATGCCGGCAGTGCCACCAGGGTGGAAGGGTCATTGTCAAGCAGGGGAAGCAT TCAATGCCTCATCTTGCAACAGGTTTGTGGTTGAATTGAAACTTGAAACCTTATCCTTGTCTGTTTTCACTTCATGAGAA TTAGTTTTCACTTGGTTTATCTACATTGGTTAATAATTTATGGAGCAGGAAAGTGATTGGAGCTAGATACTACATGAGTG GATATGAAGCAGAGGAAGGATCAGATGCAAATGTCTCCACCTTCAGATCCCCAAGGGACAGCACTGGCCATGGGAGCCAT ACAGCCTCCATAGCCGCTGGGCGCTACGTGGCGAACATGAATTACAAGGGACTTGCAGCTGGAGGAGCCAGGGGAGGAGC ACCAATGGCTAGGATTGCTGTGTACAAAACATGCTGGGATTCAGGTTGCTATGATGTGGATTTGCTAGCTGCATTTGATG ATGCCATAAGAGATGGGGTTCACATTTTGTCTCTCTCTTTGGGTGCTCAATCTCCCCAAGGAGACTATTTCAATGATGCA ATTTCTGTTGGGTCATTCCATTCTGCTAGACGTGGAGTGATGGTTGTTGCTTCAGCTGGAAATGAAGGATTTGCTGGTTC TGCTACCAACCTTGCACCATGGATGCTCACTGTAGCTGCTAGCTCGACAGATAGGGAGTTCACTTCTGATATCATACTAG GAAATGGGGCTAGAATCACGGTAAAGCTTATTAATTTTCTTTTCAAAATATAGACTCTGATGCTATCTTAGAATTCGGGT TAGACCTACCTTTATCCTGAAATTAGTTATTGGGGTAGTTAGATTTTCTGCAGTTTGAGGCATTAATTAGTTTTCTATGA TTGATTGAACAGGGTGAAAGTTTGAGTCTCTTTGAAATGAATGTCTCCACAAGAATAATATCTGCCTCTCAAGCCTATGC AGGATACTTTACTCCTTACCAATCCAGGTGAAACAAGGTACTTAATTGTGAGGACTACCTAAAAGTCAATGCAAAATGAT GAGTTTTTAAGGTATATTTTTTTCTCTTGTATTTGCTTTTGTAGTTACTGTCTGGAGAGTTCTTTGAATAAAACAAAGAC CAAAGGGAAGGTTCTGGTGTGTAGACATGTGGAGACTTCAACAGAGTCAAAGGTTGCAAAGAGCAAAATAGTGAAAGAGG CTGGTGGAGTTGGTATGATACTCATTGATGAGACAGATCAAGATGTTGCTATCCCATTCATGATCCCTTCAGCTATTGTT GGAAAGAAAAAAGGAGAAAAGCTTCTATCCTATATAAAGACTACACGGTTTGTTTCATATTTGAGAGGGAAAAAAAGTGA ATACTGTAAAGAACTTTTGTTTTTAGTGCCATTTTCTGAAGTCTAACAAGACATGCCTGGTATATGCTGAACAGTAACCC TGTTGCAAGGATATTCAGAGCAAAAACAGTACTTGGAGCTCAGCCTGCACCTCGTGTAGCATCATTTTCTTCTAAAGGCC CCAATGCTTTAAACCCAGAAATTATGAAGGTGATATTTTTATTAATATGAAAATAAATTTCCATAATCTTTGGCTTCTTT ATAATGGTCATTGTTATTTATACTTCATTCCTGTAGTTGAGTGAATTGTCAACTTGGTCCCTCAGATTTTGCCAGGCAAG TTAGTCATCGGAAGAAAGAAGTGTTTCAAAGTCTCTGAATGTGTAAAACGTCAATCAAGTTAATCCCATGACTAACTTGC TAGCGCGAAATCTTTCAGGGACCAAGTTGACCATTCACTCCCAGTAATTTATGAGTTCTCACTCCATTGTTGCTGTTGCT AAGCAGCCTGATGTCACAGCTCCAGGATTAAATATCCTTGCAGCTTGGTCTCCAGCAGCTGGAAACATGTTCAACATTGT CTCAGGAACTTCCATGGCATGTCCTCATGTAACTGGAATTGCAACCTTAGTCAAAGCTGTCCATCCTTCATGGTCTCCAT CTGCTATCAAATCCGCCATCATGACAACTGGTAATACATACGGATAAGGCGATATCAGTATCATTTTCCTTAGACCTATG TATTAAAATATGGTCCGAGATGCTTCTTAATTAAACAAATTGACATAAAGCTCCATAATAGGATAAGTTCAACCATCACT TAATGTTTATAAATCTAGACACTGAACATTAGTAAGAATTCCACTATAAAAAGAAAGAAAACGATACATGTTGTAGTTCA TTGGCTTGTCTACTTTTTCTAAAGAAACTAATCATGTTACATTCATTATGCAGCAACAATTTTGGATAAGCACCACAGGC ACATCAGTGCAGATCCAGAACAAAGAACAGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTT GATCCTGGTCTCATCTATGATTCTGAGCCAGCAGATTTTGTTGCATTCCTCTGTTCACTTGGTTACGATCAACGATCACT CCATCTTGTTACTAGAGACAACAGCACATGTGATAGGGCATTCAACACTGCATCTGACCTCAACTATCCATCTATTGCAG TTCCCAAGCTTAAAGACAGCTTCTCAGTTACTCGGGTTGTGACTAATGTTGGAAAAGCACAAAGTGTATACAAAGCTGTA GTGTCTTCTCCCCCTGGTGTGAATGTCACGGTCGTGCCGAACCGGTTAATCTTCACACTAGTTGGGCAGAAAATGAAGTT CACTGTGAATTTCAAAGTAACTTCTCCCTCAAAAGGATATGCATTCGGGTTCTTGTCGTGGACGAATAGAAGATTGCGAG TCACAAGTCCTTTGGTTGTTAAGGTTGTACCGGGAAAACATGGTTTGGTCAGATAGCAAAACCTGTAAATATCTATATTC GTTTTAAGAGCTTTGAGAACCTTATAGTCACTAGAATAAACCATTCATACTGAAATCCTGAGGCAAATTAGGTGATCACT GCCAAAGTTATATGCTTGGAGTGCAACAGCAGTTACAAAAAGTAGGATCCAAAGAGATGATAGATTTAAGCCCTGAAATT ATTTTGAAAGTCGATACTATTTGTCCGTTGTTGCAACATACTACTACTCCATTACTTTGACCGGAAAAGAATTTGGCTAA TCCCAGTTTTGTTTATGCTACAAACTATTAGATTAGATAATGGTAGCTCAAATTTGCTGGTAGTTGAAATGATCCATTTC ATAATGGAAACTGGAAGCTCTTCAAAATTCTAGGATTTTGGTAAATGTGGTCCAGCACAGCAAAATATAACCTAAAAATT CAGATGGTAAAAACTTCTTTCTGAATACGAACGACAAGCAATCCTTATGACAAAAAAGTAATTCTGACTGAACTCTGGAC ATCAGTAATAGAGGGTTTGAATTTCAACTCATTCTTGTCTAAAAATGTTTTGTCCTCAAAGTTCCTTAATGAAATACAAA AGAAACCAAGCATGGACTTGTATTTTCCATTTAATATAACAACATATGGGTACCATGATCAG
CDS sequence (LotjaGi4g1v0141200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCCTCTACTTATGCTATGAGGAACACCCTTTGGTATCTTTTGTGTCTTGGTGTGCTGGTTGCAAACGTTAGCTT TTGCTTTGCTTCCAAGGTTTATGTAGTGTACATGGGAAGCAAAACTGGTGAACACCCGGATGATATTTTGAAGGAAAATC ATCAAATGCTTGCTTCTGTTCACAGTGGAAGCACTGAGCAAGCCCAAGCTTCTCATATTTATACTTACAGACATGGTTTC AGAGGATTTGCAGCCAAGCTCAATGATGAACAGGCTTCCCAAATTTCTAAAATGCCAGGAGTGGTTTCTGTTTTCCCCAA TACTAGAAGAAAGCTGCACACAACTCATTCATGGGATTTCATGGGGCTTCTTGACGACCAAACCATGGAGACTCTGGGAT ACTCCATCAGAAACCAAGAAAACATCATCATTGGTTTCATTGATACCGGAATTTGGCCGGAATCCCCAAGCTTCAGTGAC ACTGACATGCCGGCAGTGCCACCAGGGTGGAAGGGTCATTGTCAAGCAGGGGAAGCATTCAATGCCTCATCTTGCAACAG GAAAGTGATTGGAGCTAGATACTACATGAGTGGATATGAAGCAGAGGAAGGATCAGATGCAAATGTCTCCACCTTCAGAT CCCCAAGGGACAGCACTGGCCATGGGAGCCATACAGCCTCCATAGCCGCTGGGCGCTACGTGGCGAACATGAATTACAAG GGACTTGCAGCTGGAGGAGCCAGGGGAGGAGCACCAATGGCTAGGATTGCTGTGTACAAAACATGCTGGGATTCAGGTTG CTATGATGTGGATTTGCTAGCTGCATTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTCTCTTTGGGTGCTC AATCTCCCCAAGGAGACTATTTCAATGATGCAATTTCTGTTGGGTCATTCCATTCTGCTAGACGTGGAGTGATGGTTGTT GCTTCAGCTGGAAATGAAGGATTTGCTGGTTCTGCTACCAACCTTGCACCATGGATGCTCACTGTAGCTGCTAGCTCGAC AGATAGGGAGTTCACTTCTGATATCATACTAGGAAATGGGGCTAGAATCACGGGTGAAAGTTTGAGTCTCTTTGAAATGA ATGTCTCCACAAGAATAATATCTGCCTCTCAAGCCTATGCAGGATACTTTACTCCTTACCAATCCAGTTACTGTCTGGAG AGTTCTTTGAATAAAACAAAGACCAAAGGGAAGGTTCTGGTGTGTAGACATGTGGAGACTTCAACAGAGTCAAAGGTTGC AAAGAGCAAAATAGTGAAAGAGGCTGGTGGAGTTGGTATGATACTCATTGATGAGACAGATCAAGATGTTGCTATCCCAT TCATGATCCCTTCAGCTATTGTTGGAAAGAAAAAAGGAGAAAAGCTTCTATCCTATATAAAGACTACACGTAACCCTGTT GCAAGGATATTCAGAGCAAAAACAGTACTTGGAGCTCAGCCTGCACCTCGTGTAGCATCATTTTCTTCTAAAGGCCCCAA TGCTTTAAACCCAGAAATTATGAAGCCTGATGTCACAGCTCCAGGATTAAATATCCTTGCAGCTTGGTCTCCAGCAGCTG GAAACATGTTCAACATTGTCTCAGGAACTTCCATGGCATGTCCTCATGTAACTGGAATTGCAACCTTAGTCAAAGCTGTC CATCCTTCATGGTCTCCATCTGCTATCAAATCCGCCATCATGACAACTGCAACAATTTTGGATAAGCACCACAGGCACAT CAGTGCAGATCCAGAACAAAGAACAGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTTGATC CTGGTCTCATCTATGATTCTGAGCCAGCAGATTTTGTTGCATTCCTCTGTTCACTTGGTTACGATCAACGATCACTCCAT CTTGTTACTAGAGACAACAGCACATGTGATAGGGCATTCAACACTGCATCTGACCTCAACTATCCATCTATTGCAGTTCC CAAGCTTAAAGACAGCTTCTCAGTTACTCGGGTTGTGACTAATGTTGGAAAAGCACAAAGTGTATACAAAGCTGTAGTGT CTTCTCCCCCTGGTGTGAATGTCACGGTCGTGCCGAACCGGTTAATCTTCACACTAGTTGGGCAGAAAATGAAGTTCACT GTGAATTTCAAAGTAACTTCTCCCTCAAAAGGATATGCATTCGGGTTCTTGTCGTGGACGAATAGAAGATTGCGAGTCAC AAGTCCTTTGGTTGTTAAGGTTGTACCGGGAAAACATGGTTTGGTCAGATAG
Protein sequence (LotjaGi4g1v0141200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSSTYAMRNTLWYLLCLGVLVANVSFCFASKVYVVYMGSKTGEHPDDILKENHQMLASVHSGSTEQAQASHIYTYRHGF RGFAAKLNDEQASQISKMPGVVSVFPNTRRKLHTTHSWDFMGLLDDQTMETLGYSIRNQENIIIGFIDTGIWPESPSFSD TDMPAVPPGWKGHCQAGEAFNASSCNRKVIGARYYMSGYEAEEGSDANVSTFRSPRDSTGHGSHTASIAAGRYVANMNYK GLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAQSPQGDYFNDAISVGSFHSARRGVMVV ASAGNEGFAGSATNLAPWMLTVAASSTDREFTSDIILGNGARITGESLSLFEMNVSTRIISASQAYAGYFTPYQSSYCLE SSLNKTKTKGKVLVCRHVETSTESKVAKSKIVKEAGGVGMILIDETDQDVAIPFMIPSAIVGKKKGEKLLSYIKTTRNPV ARIFRAKTVLGAQPAPRVASFSSKGPNALNPEIMKPDVTAPGLNILAAWSPAAGNMFNIVSGTSMACPHVTGIATLVKAV HPSWSPSAIKSAIMTTATILDKHHRHISADPEQRTANAFDYGSGFVNPARVLDPGLIYDSEPADFVAFLCSLGYDQRSLH LVTRDNSTCDRAFNTASDLNYPSIAVPKLKDSFSVTRVVTNVGKAQSVYKAVVSSPPGVNVTVVPNRLIFTLVGQKMKFT VNFKVTSPSKGYAFGFLSWTNRRLRVTSPLVVKVVPGKHGLVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 10 | 10 | - | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| Phobius | 11 | 22 | 12 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| PANTHER | 13 | 758 | 746 | 0.0 | – | |
| PANTHER | 13 | 758 | 746 | 0.0 | – | |
| Phobius | 23 | 30 | 8 | - | – | |
| Gene3D | 24 | 113 | 90 | 8.3E-29 | ||
| Phobius | 31 | 763 | 733 | - | – | |
| Pfam | 33 | 113 | 81 | 1.6E-17 | ||
| CDD | 111 | 578 | 468 | 2.59664E-119 | ||
| SUPERFAMILY | 112 | 616 | 505 | 1.11E-71 | ||
| ProSiteProfiles | 117 | 612 | 496 | 28.74 | – | |
| PRINTS | 139 | 158 | 20 | 2.4E-12 | ||
| Pfam | 140 | 602 | 463 | 9.0E-46 | ||
| Gene3D | 141 | 626 | 486 | 6.4E-175 | ||
| PRINTS | 217 | 230 | 14 | 2.4E-12 | ||
| Gene3D | 348 | 490 | 143 | 6.4E-175 | – | |
| CDD | 354 | 483 | 130 | 1.99479E-29 | – | |
| Pfam | 386 | 469 | 84 | 2.5E-7 | ||
| PRINTS | 541 | 557 | 17 | 2.4E-12 | ||
| ProSitePatterns | 542 | 552 | 11 | - | ||
| Gene3D | 629 | 755 | 127 | 1.2E-35 | – | |
| Pfam | 658 | 752 | 95 | 1.5E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi4g1v0141200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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