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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0208600 |
| Transcript ID | LotjaGi4g1v0208600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose 6-phosphate phosphatase; TAIR: AT4G22590.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9SUW0|TPPG_ARATH Probable trehalose-phosphate phosphatase G; TrEMBL-Plants: tr|A0A0L9TR07|A0A0L9TR07_PHAAN Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi4g1v0208600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:48406088..48410197) extracted from Lotus japonicus Gifu genome v1.2.
CTGATATATTATATATTTTTGGTAATCGTGGCCATGCATGAATCATCATCCTGAGCATGATCTATTTTGTGAGCTTTCTT TTTATCTTTCTTTCACCAAATTCTTTCAACAATCTTATTAGATCTAAATCTAGATTGTAGTTGCCTTATATGTGCAACTG GAAGTCCTAATATAAAAAAGTAAACATTTATCAGCCAAGGGACATGAAATCATTTCAGACTTTTGATGGATTCAGCTCAA ATATTTGATTCTTTCCTTGTATTGATTTGTTCTGCCATGAATTCCCTTTTCCTAGGATAGCTTTTTATACCCTGCAACCC TATATTTTATATTTTATTAAGAAATTGAAGGTTTTCAATGACACAGTGAAATAAAAGGATTTACTTACTGCGAAAGAGGT TTTCTTGCACAATGTTTGGTTATAGACTGGACATTTCCCATTATTAGCTTATTGGTTGAGGTGGTACTTGCGATTATCCT TAAGCAATGTATTGGTTTCGAGTCCTGTGAATGACAATACAACAATACACTCTGCTGGGAGTCTTGTGAATGTAATTTTT TTTGTGATTTTACCGTCTTGAGAAAAACAAAGATTTAATGCCTATATTGCAGATCCTGCAATAATCACTCTCAAATCAGA AGACCTTGATCGTTAATACATTCCTAGTTGCAAATGCAATGTTGTATATAAGAAGGTATTTGTTGGTTTTCATTTGTTTC ATATGCCTTACATTTTGTTTTGCATGTCATGGAAAATCCCAATTTGCTTCCTATTGCAGGGAAACCCGTGCTTGATGGAC TGCTCACACAGTAGCAGTGACAAGAAAACATTAAAGCGGTGGTTTTTTATAGATAAGAGAGTAGGTTAAGCTAAAATCTA GGATAAGTTGCACATAAATAATCCCTCTTCTCATGACATAGTCACTCATAATATCAGACCTATCATTTATTACCTTTATT GAAACTTGCCTCTCAAATAGTCTAGCTAGCTAGGTTTAATGGATTTGAAGTCTTCTCATGCTTCTCCCTTACTTACTGAT CCTGTTCCTATCAACAAGTCACGGCTTGGAATCCATCCTAATCAGCTAGCTTACTCTCATCAAGATTCATCAATGTCTTC CGGGAAGTTCACAAAATCCAGCTCAAAGAAAAGTATAGGGAGTCTTGATGATGTCAGGTCCAATGGTTGGCTTGATGCTA TGAAGGCTTCTTCCCCTCCTAGGAAGAAGTCACCTAAAGGTTCAAGTACTCAAGTTTCCGCAATTGACAATGACATTGAA GACTATAATTCATGGATGGTATGCATTGTACTTAACTTTTTGCATGTTGTTCAATGTTTGGTTTATAGCATGTTTAGATT AACTTCTCTTTTTTTACCATCAATTCTAAATCGTAGAAACAATTTATAGAAACGTATCTCGAGGATTGATTTTGACTTAG AATCAATTATAGAAAAAACTCCTAACATGCACTTATTTGAATTCACTTCATTGGTCATGTTAAAAAATCTCCTAAATTCT CACTAATTCATTTTATTTTACCAGTTGGGTTATCCTTCAGCAATAGATTCTTTTGAGGAAATTGTTGATCGTGCTAAGGA TAAGACAATTGCAATGTTTCTTGACTATGATGGCACACTGTCACCAATTGTAGATGATCCAGATTGTGCCTTTATGTCTG AATATGTAAGTAATGCATAGTGGATTCTCATAAAATATATTAATAATTCCTAATTAGTAAATTCTTTCTCTGTTCTCAAT GTTATTTTTATCTTCCTTTTTCCCTCTCTCAAAATCATGCTTAGATGCGCAAAACTGTAAGAAGAGTAGCAAAGCATTTC CCTACCGCAATCATAAGTGGGAGAAGTCGTGATAAGGTAACCAGGATGAATTATTTGAAATTCTTCAATGAAGCACTATT TAGAATCACTTCTGAAAACCAGAAGCTACTCACAAAAGCTTCTTTCCAAGTTATATTATGACATAAGAATCAATTCTAGA AGGATTTATAAACATGTTGTAAGTCATTAACATATGGTTACATCCCTTTCAGGTGTTTGATTTAGTTAAACTAACAGAAC TCTACTATGCTGGTAGTCATGGGATGGACATTATTGGCCCTGTTAGTGAGACTTTGTCAAAAAACCATCAAAGTTGTGTC AAGTCTACTGACCTTCAGGTATGTAATAATAGTAAATTAGTTTTTTATTCTTGGAATCTTCTATACATTAATAAATGTCA AATAGTTAACTATTTCTTCAAAATGGCAGGGAAAAGAGATAACTCTTTTTCAACCTGCAAGAGAATTCATTCCTATGATT GATGAGGTGAAATTTTTGTCTCAATTAATCTTGAAGAAGTATTCACTTTTAAATGTATAACAATGAAATAAATGATGGGG TGTTTTCATGTAGGTTTTTAGAACCCTCATTGATCTTACAAAAGACATAGAAGGCGCCAAAGTTGAAAATCACAAGTTTT GTGTTTCTGTACATTATCGTAATGTAGAAGAGAATGTAAGGATTTTTACCACAACAATTATAAGTTGATGTCTTTTTTCA TTATTATTTTGATGTTCTCATTATTTTAATTCTTGAATCGATTGTAGAATTGGACAACGATTGGTCAGCGGGTCCATGAT ATGCTAAAAAATTACCCTCGTTTACGCTCAACTCATGGACGGAAGGTACCCTAATTCCAATGAGAAATATTATAAACTTT GTTCGTTGTAATAATTTTTTTAACTTTTCATGATAGTTATTAATTGATATTTTAAGCATGCTTGAGAATATTTTTATAAT TAATTATAAAATGAAAAAACTGTTATGCTGGGATTTTATAAGTAACTCCAAGATAACAAAATTGATTATGAAAAATAAAT TAATCCAAACATGCTATTTAAGTAACTCTTGACTCAAGTTTTTTAATGCACCATAGTGTATTTCAATTTGTTACATTATA ATACATTTCCTTGTGTGTGTGGTGTTATAGGTTTTAGAAGTTCGTCCAGTGATCGACTGGAATAAAGGAAAAGCTGTTGA ATTTTTACTTGAATCTTTAGGTAAGAACCTATTTTTGACTTTACACACCACATATAACAAAGGTATTCAAAGGATACAAT ATGGAGTAAATTATGGTCTTGTGCAGGGCTAACTGATAGGAATCATGTGCTTCCCATCTACATTGGAGATGATAAAACCG ATGAAGATGCATTCAAGGTACTAAATCAAAGTTGTGTGAACTAGAATTTTCAACTTTTCATCTATAGGTTGTTTGCAAAA GAGTTGTGCACACACTTCAATGCACGTTTGAGTAAAAGCTATAAATTGAAGCTTCCGAGTAACAGACTTATATGGTGTTT GCAATGTGGTTCCAAACACATGCTTATGGTAAATTAGGATTGGCGATGGGTAAACAATCCAAATAATTGTAGCTTCTTCC TATAATTGATTATGAATTTTTTTACCACATAATCAAACATGTTACTAATCTTCTTATACAACTCCATATTATAATTACAC ATGAGAAGTCATGTGAAATTTTCTCATTTATCTCTCTTTATGGACACAAATTTATACAATCACACTGAATGTTTGTATAT ATTTAGGTGCTTAGGGAGAGCAATCAAGGTTATGGGATTTTGGTATCATCTGTGAGGAAAGAAAGCAATGCCTTTTACTC TCTCCGAGACCCCACTGAGGTTTAAATCCCAACACATTTTATATACTCTTTCATGTACACTATCAATATGATTCTTCATA TTTGGAGCTGAAGGACATTATAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATG CAGGTGATGAAGTTTCTCCAACTCTTGGTCAATTGGAAGAAACAACAAGAAAGGAAGCGTGGAAAAAAATAAACCTGTAT ACATATATATAATTTAGTACATATTAGGTTTTGATTTAAAATGTGATTAGATCAGCATTTTGTTTTAATACCAATAAGTT ATTATGAATGAAAATTTTTAGATATTGTGGATTTTTATTTTGTTTTGAAATTTTTGCATTGTTAATATTTTCGAGTTGCA TGGTTGTGATGTATATATCATATATCTACC
CDS sequence (LotjaGi4g1v0208600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTGAAGTCTTCTCATGCTTCTCCCTTACTTACTGATCCTGTTCCTATCAACAAGTCACGGCTTGGAATCCATCC TAATCAGCTAGCTTACTCTCATCAAGATTCATCAATGTCTTCCGGGAAGTTCACAAAATCCAGCTCAAAGAAAAGTATAG GGAGTCTTGATGATGTCAGGTCCAATGGTTGGCTTGATGCTATGAAGGCTTCTTCCCCTCCTAGGAAGAAGTCACCTAAA GGTTCAAGTACTCAAGTTTCCGCAATTGACAATGACATTGAAGACTATAATTCATGGATGTTGGGTTATCCTTCAGCAAT AGATTCTTTTGAGGAAATTGTTGATCGTGCTAAGGATAAGACAATTGCAATGTTTCTTGACTATGATGGCACACTGTCAC CAATTGTAGATGATCCAGATTGTGCCTTTATGTCTGAATATATGCGCAAAACTGTAAGAAGAGTAGCAAAGCATTTCCCT ACCGCAATCATAAGTGGGAGAAGTCGTGATAAGGTGTTTGATTTAGTTAAACTAACAGAACTCTACTATGCTGGTAGTCA TGGGATGGACATTATTGGCCCTGTTAGTGAGACTTTGTCAAAAAACCATCAAAGTTGTGTCAAGTCTACTGACCTTCAGG GAAAAGAGATAACTCTTTTTCAACCTGCAAGAGAATTCATTCCTATGATTGATGAGGTTTTTAGAACCCTCATTGATCTT ACAAAAGACATAGAAGGCGCCAAAGTTGAAAATCACAAGTTTTGTGTTTCTGTACATTATCGTAATGTAGAAGAGAATAA TTGGACAACGATTGGTCAGCGGGTCCATGATATGCTAAAAAATTACCCTCGTTTACGCTCAACTCATGGACGGAAGGTTT TAGAAGTTCGTCCAGTGATCGACTGGAATAAAGGAAAAGCTGTTGAATTTTTACTTGAATCTTTAGGGCTAACTGATAGG AATCATGTGCTTCCCATCTACATTGGAGATGATAAAACCGATGAAGATGCATTCAAGGTGCTTAGGGAGAGCAATCAAGG TTATGGGATTTTGGTATCATCTGTGAGGAAAGAAAGCAATGCCTTTTACTCTCTCCGAGACCCCACTGAGGTGATGAAGT TTCTCCAACTCTTGGTCAATTGGAAGAAACAACAAGAAAGGAAGCGTGGAAAAAAATAA
Protein sequence (LotjaGi4g1v0208600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLKSSHASPLLTDPVPINKSRLGIHPNQLAYSHQDSSMSSGKFTKSSSKKSIGSLDDVRSNGWLDAMKASSPPRKKSPK GSSTQVSAIDNDIEDYNSWMLGYPSAIDSFEEIVDRAKDKTIAMFLDYDGTLSPIVDDPDCAFMSEYMRKTVRRVAKHFP TAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVSETLSKNHQSCVKSTDLQGKEITLFQPAREFIPMIDEVFRTLIDL TKDIEGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDMLKNYPRLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLTDR NHVLPIYIGDDKTDEDAFKVLRESNQGYGILVSSVRKESNAFYSLRDPTEVMKFLQLLVNWKKQQERKRGKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 387 | 387 | 3.8E-207 | – | |
| MobiDBLite | 1 | 87 | 87 | - | – | |
| PANTHER | 1 | 387 | 387 | 3.8E-207 | – | |
| MobiDBLite | 26 | 56 | 31 | - | – | |
| TIGRFAM | 121 | 379 | 259 | 7.8E-46 | ||
| Gene3D | 122 | 210 | 89 | 1.1E-19 | ||
| CDD | 123 | 373 | 251 | 5.11649E-60 | – | |
| SUPERFAMILY | 123 | 383 | 261 | 2.6E-45 | ||
| TIGRFAM | 124 | 342 | 219 | 4.7E-16 | ||
| Pfam | 125 | 368 | 244 | 1.8E-71 | ||
| Gene3D | 218 | 392 | 175 | 2.1E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi4g1v0208600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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