Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0227400.1

Overview

Field Value
Gene ID LotjaGi4g1v0227400
Transcript ID LotjaGi4g1v0227400.1
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT4G24740.1 LAMMER-type protein kinase AFC2; Swiss-Prot: sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2; TrEMBL-Plants: tr|A0A151TE71|A0A151TE71_CAJCA Serine/threonine-protein kinase AFC2; Found in the gene: LotjaGi4g1v0227400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:53734682..53738407) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTTACAAGGCTGGCCCAGATTTAACCACAATCCAAAGTTGACAAGAGAATATCCCCAAGCAAGATGCTCCCTTACCC TGACACGTGTACGGTGAGATTTCATCTCAAAAAGCCTCCACATTCGGCCAACAATAAAATTAGGGTTCTCCAACCAAACC GTGCTGTCTTTCTTCAAAAATATCATATCTTTCCACTATCCGAATCTCAATTTTCCTCCGTTGAAGTCTTCGTTCGTTGT TCTCTGAATCATGGAGATGGAACGCGTCATCGAATTCCCCCACACTCACATGGATCGCCGCCCCAGAAAGAGAGCGAGGT TAGGCTGGGACGTCGCTGAGGCCCCCAAGGTAAAACTCTTCTCCGCCTCTTGAAATCTCAGATCTGACATTTTTCCTTTG TTTTTCGTTGGTTTTTATTTTTTCTGGTTGTAGATCTGGTGGAAATTATGTAAATTAGGTATGTTTGGTTCAGGTAACGT TGTTCTTTTGTTTCCCAGGATTTTTGTGATGAATTTTTGTCGATTTGTTAGGTTTTGGTGTTTTTAATCAATAATATTCA TCTGGGTATGCGTCAATTACTCGATCTGATTTTTGGTACTTGACAATTTTTATATTTTTTGTATGATTTCGTCTTGGTGG TATATTCTTATGCAGTTTTATCTCTAATTTCTTTGTGAATTTTTCATGTATGATAAAGCTTGATATATCAATATTAATAT CAAACGTTTTGATGTTATCATCTGTAAAATTGATGAGTTGTTACACAAGATATAATTTCTGAGATATCATCTTAATTGAA TTTAAAGAATGAATTATCTGTCTCTGCTATTTTTATGTTAATTATGTTATGTATAATTGTTTTTTAACTCAAATTTTGTG TGTATGTTCTTGATGATTAATTTTGTGTGTGCTAGAATATGCTTATTCATTGCACTCATGTGCTTTTATTAATTGTAAGT TTGTAACAAATTGAGATGGTAGAGAGGGCCTTGGTAGGGCTCATGATAGTGGGGTAGAATATTGTTTTTTATTTTTAACC GAGTGGTGCATGAATGGATATGGCTGTGTGTAGGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGGGAATATTTCTGG CTATGCTCCTTCAAGGGGTCCATCCGAACATACCAATAGTTCTCTATTTGCTAAGGGAGTTGCTCGAAATGGTTCTCCCC CTTGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCAGTTGGAGAAAATTTAACATCTCGCTGTAATTACACTTTA CCATCATTGAGATATTTATATTCTTATATGTTATGGCCAAACACTGGTTTATTCTTTCCTGATAAACCTGCAATTATTTG CTTGCAAAACTCATGCATCTTCACTCGCTTAATTTTGTTAATTTGGGTGTAACACATTAAGTGATCCATCTCAGTTGTAG GAATTTTATTACAGAAGCTTATTTTATGTGTCCATAGGTATAAAATCATTTGGATATTGGCAAGGCTTGCATTGCTTACA CGTGTTCTTTATAATGTTGCAGATAAGATCCATTGCAAAATGGGTGAAGGAACCTTTGGACAGGTCTTAGAATGCTGGGA CAGAGAAAGGAAGGAAATGGTTGCCATTAAAATTGTTCGTGGTATAAAGAAATATCGAGAGGCCGCCATGATAGAAATTG AGATGTTGCAACAGCTTGGGAAACATGACAAAGGAGGCAGCCGGTAAGAGAAGTTTTAGCTTTATTTTACTAGTACTATG TAAAAAACTTTTATTTCCATTGCATTGGTTAAATTTGCTTATTCCTTGCAGTTGTGTTCAAATACGGAACTGGTTTGACT ATCGTAATCATATCTGTATTGTAAGTATTTGATTGATTTGAGATGGATTGATTTCCCCAATATACAAATAACGTGGGGGT TAAAGTATCGGTGAATTTAAATGGTTTTAACAGGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAA CAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTATTGGAATGTATTGCATGTGTGTAGTATT ACTTGAACTAGTTTCCTTTAAGCCATTTCTTCTATATATTTCACTTTATATCATGTAAATTATGCTATCATAAGCTGATA ATATTGCACACCATCTCATTTGCATCACATCTTTAGGAGTTAGTTTTGATATAATAAAATCATCAGCATGTGTTGTTTTT GTCACTGGGGTAGCTTCTAATTGTTTTCTTCATTTGTAAATCTGCAGTCATGCATGACTTGTGCATGATCCATACTGACC TGAAGCCTGAGAACATACTGCTAGTTTCACCAGATTATGTCAAAGTTCCTGACTACAAGGTATGTTTCCTGTTTGCACAT GTGGCTATTTGTTTTATAGACTCGTGCACTCTTTGTTTTTATAATTTTTCCTACTCATGGTGCACCTGTGATACAGGTGA GAAGAGAAAAATCTTAAATTCTAGACACATGTCTGTTTTATGTCTGTTAAGAGAATGTAATTGACATTCAAACTGCACTA TATAAAATACTAATTTGAAATAAAAGTTTCTGTTATCAGTGGTTGTTGGTAGTTTTTTTTATGACCATTGTCTCCTTTTT TCTTATTCGCAGAACACACTTAGGATCATGTTTGTGTCCTTTATTTTTTAGTTTGTTTTGATGTGAGAAGTAAAAATTAA ACCAATATGTAGCATTGCTCCTTTTTTTTTCGAAGGCATTTATTGATTCAGTTTCTGACATTCATTTTCTTGTTGAACAG AATTCATCTAGATCACCAAATTCCTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGACTTTGGCAGTAC CACTTATAAGCGAGAAGATCAAAGTTACATTGTATCAACTCGTCATTATAGAGCACCTGAAGTCATCCTTGGTATATACA AATTCTATGGAAAGAAAAGCTACATTCTAGTTTCATGATGAATTATATGATACTGGAAATATCAACTGTATTGTTGATTT TGGCAATGGTTGTGTAGGACTTGGCTGGAGTTATCCATGTGATACATGGAGCGTGGGATGTATACTGGTTGAACTATGCA CGGTATTTTTTACTCTTAGAAAACCTTGTCTCAGCACACTCATCCAACTTTTGAAGTTCTGACCTGTGAGCATCTGTTGT AGGGCGAAGCTTTGTTTCAGACTCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTACTTGGTCCATTACCGCAG CACATGTTGAAGAGAGTCGAGTGAGTAACTTACGATTGGAACTTGTATCAATTTGTTGATTTTCAAACATGACAAATGAG TATGTATTTGCTTGTGCATGTTCAGCCGACATTCTGAGAAATATGTTAGAAGGGGTAGATTAGACTGGCCTGAGGGCGCG ACCTCAAGGGATAGTATTAAAGCTGTAACAAAGCTTCCCAGGCTACAGGTTTGTTTAGTTACTTTTTGCTTCTTGATTTA CAGCATAAAACAAGTTAAATGGTTTTTATTGACTTTTCTTTGTAATTTTTGTCAAACAGAACCTTATAATGCAGCATGTT GATCATTCAGCTGGTGATCTCATACATCTCTTGCAAGGGTTACTTAGATATGACCCCTCTGAGAGACTTACAGCTAAGGA AGCTCTGAATCATTCTTTCTTCATGAGAGATAATCTTCGGAGATAA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0227400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTCCCTTACCCTGACACGTGTACGGTGAGATTTCATCTCAAAAAGCCTCCACATTCGGCCAACAATAAAATTAGGGT TCTCCAACCAAACCGTGCTATGGAACGCGTCATCGAATTCCCCCACACTCACATGGATCGCCGCCCCAGAAAGAGAGCGA GGTTAGGCTGGGACGTCGCTGAGGCCCCCAAGGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGGGAATATTTCTGGC TATGCTCCTTCAAGGGGTCCATCCGAACATACCAATAGTTCTCTATTTGCTAAGGGAGTTGCTCGAAATGGTTCTCCCCC TTGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCAGTTGGAGAAAATTTAACATCTCGCTATAAGATCCATTGCA AAATGGGTGAAGGAACCTTTGGACAGGTCTTAGAATGCTGGGACAGAGAAAGGAAGGAAATGGTTGCCATTAAAATTGTT CGTGGTATAAAGAAATATCGAGAGGCCGCCATGATAGAAATTGAGATGTTGCAACAGCTTGGGAAACATGACAAAGGAGG CAGCCGTTGTGTTCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCT TATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCTCATGCATGACTTGTGCATGATCCAT ACTGACCTGAAGCCTGAGAACATACTGCTAGTTTCACCAGATTATGTCAAAGTTCCTGACTACAAGAATTCATCTAGATC ACCAAATTCCTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGACTTTGGCAGTACCACTTATAAGCGAG AAGATCAAAGTTACATTGTATCAACTCGTCATTATAGAGCACCTGAAGTCATCCTTGGACTTGGCTGGAGTTATCCATGT GATACATGGAGCGTGGGATGTATACTGGTTGAACTATGCACGGGCGAAGCTTTGTTTCAGACTCATGAGAATTTAGAGCA CCTTGCCATGATGGAGAGGGTACTTGGTCCATTACCGCAGCACATGTTGAAGAGAGTCGACCGACATTCTGAGAAATATG TTAGAAGGGGTAGATTAGACTGGCCTGAGGGCGCGACCTCAAGGGATAGTATTAAAGCTGTAACAAAGCTTCCCAGGCTA CAGAACCTTATAATGCAGCATGTTGATCATTCAGCTGGTGATCTCATACATCTCTTGCAAGGGTTACTTAGATATGACCC CTCTGAGAGACTTACAGCTAAGGAAGCTCTGAATCATTCTTTCTTCATGAGAGATAATCTTCGGAGATAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0227400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLPYPDTCTVRFHLKKPPHSANNKIRVLQPNRAMERVIEFPHTHMDRRPRKRARLGWDVAEAPKAQVGLFCGQEVGNISG YAPSRGPSEHTNSSLFAKGVARNGSPPWRDDDKDGHYMFAVGENLTSRYKIHCKMGEGTFGQVLECWDRERKEMVAIKIV RGIKKYREAAMIEIEMLQQLGKHDKGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVLMHDLCMIH TDLKPENILLVSPDYVKVPDYKNSSRSPNSYFKRVPKSSAIKVIDFGSTTYKREDQSYIVSTRHYRAPEVILGLGWSYPC DTWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHSEKYVRRGRLDWPEGATSRDSIKAVTKLPRL QNLIMQHVDHSAGDLIHLLQGLLRYDPSERLTAKEALNHSFFMRDNLRR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45646
34 447 414 7.3E-264 –
PANTHER
PTHR45646:SF16
34 447 414 7.3E-264 –
SUPERFAMILY
SSF56112
116 445 330 3.24E-70
IPR011009
CDD
cd14134
116 442 327 0.0 –
Gene3D
G3DSA:3.30.200.20
121 209 89 4.5E-100 –
Pfam
PF00069
129 442 314 2.1E-41
IPR000719
ProSiteProfiles
PS50011
129 442 314 30.28
IPR000719
SMART
SM00220
129 442 314 4.7E-60
IPR000719
Gene3D
G3DSA:1.10.510.10
183 441 259 4.5E-100 –
ProSitePatterns
PS00108
238 250 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0227400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…