Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0270300 |
| Transcript ID | LotjaGi4g1v0270300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Xylosyltransferase 1; TAIR: AT5G15050.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9LFQ0|GT14B_ARATH Beta-glucuronosyltransferase GlcAT14B; TrEMBL-Plants: tr|I3S3R0|I3S3R0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0270300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:63602595..63605383) extracted from Lotus japonicus Gifu genome v1.2.
CAACAACAACAACAACAACAACAGAAGAAGCGAAAATGGTTCCTCCCCTTAATCTTCTCCCTTCTACTCTCCACCATCCT CATCCTCCTTTCAATCTTCGTCTCCTCCGATTCCTCCTCCCTGCTCTACCTCTACCGCTCACGCGCCACCCCAGACCAAC CGCACTTCGTCGAGTCCAAGCTGAAACCCTCCACCACTTCACCCATCAACTCTGTTCCCAGGATCGCCTACTTGATCTCC GGTTCAATGGGTGATGGGGAAACTCTCAAGAGGACGCTTAAGGCCCTTTACCATCCCAGAAACCAGTACGCTGTGCATTT GGACCTGGAGGCTCCTCCTCTTGAGAGATTGGACCTTGCTAACTTTGTCAAGAACGAGCCTCTGTTTGCTCAACTGGGTA ATGTTCGGATGATCGTGAAAGCTAACTTGGTTACCTATAGAGGACCTACCATGGTCACCAATACCCTTCACGCTGCTGCT GTTTTGTTCAAGGAAGGTGGAAACTGGGACTGGTTCATCAATCTCAGCGCTTCTGATTATCCATTGGTTACACAAGATGG TACCCTTTTTTCATCTCATGTTTGTTCTTGACGGGTATAACGATGTAGATTTTTTTGTTGGTTAGTGTTAGTGTGTTTTT TATGGAAATTCATTTAAAATTCGTTATATTTGAGATGGGGATGGATGGATGATTATTCATTGGCTTGGCTGTTTCCTAGT TACCGATTTGGTGTTTGGTGATTTAAATGCTGTTTTGTTTTGTGATGCATTAGTTGAAAGTTAGAAGCTGACTTGCTTGT TTCTTAGTGAGGTTATTGCCAGCTGACAGCTGCATTTTGTTGCTAATTTTGCTTATAGATATATGTAGAGACTTTCTGGA TTTGGATTAGTCTGATCTGGTCCCAAATTGTTGTTATTATTACAACATTTGTCAGCAGGAACCCCCCAATTATGCTCTTG TATTGTAGGCCAGGTTTGGAGGGAGGAATGCTGGGTTTCAGATAGAATTCATTGAAACTCCAGTCCACTAGTTTTATTTT TTACTTTGAGTTGACTTTATGTTTGCAAGTGTGTAACCTCTCTGCCATGTGTGTTGGATGGATACCATATAAGAAAAAAA TCTAATGAGAATTTTGATGGTTGCTTGTTAACTCCGTTAATTCATTGGAACATAAAAGAGAATTAGGAATGTGAATCATA TTGTCTTGTTTTCACAATCATCCACTGACTCTTTCAATTTACTATGTCTCTTTTGCACAACAGATCTGCTGCATACGTTA TCATCTGTTCCGCGGCACCTTAACTTCATTGAGCACACCAGTGATATTGGATGGAAGGAGTATGTTGCTGATCCTTTCAT CCCTTCTTTTTATTGTATGATTTGTTTGAAATTCAAAAGTAACCTGCAGTTTTATGAAATATAAATGTGTCTTATCTTGA TTAGTAAATCTTTACTGTTTTCTTTTTTCAATAGAGATCAGAGAGCCAAGCCTGTTATAATTGATCCGGCACTTTATAGC ATCAATAAATCTGATGTGTTTTGGGTGACAGAGAAAAGAAGTGTTCCCTCAGCATATAAACTGTTCACAGGTGAGAAACC TGGTTTCTGATGCCCTCTCAGCTTTATTCAATCTCTATTTTAATATTTTTCTTCTCGCCAGCTTAATTATTTTGCTCTTT CAAACTTGTAGAATGTTTCAATAGTCTATGAGCCATCTAACCCTTGAATAGATTGAAGATATTTCTAAAACCCAAATAGC TGTAAAAAAGTTCTGGAATGAAGTCAAACAGCCATAATAAAAAGGTAAAAAGAGAGCAATCATAGTGTTGCCAATCCAAT TTATGGACTAACTTCAGTATCCAGTGGTTTTGAGTATGATTACTCAGAATTATAGCACCTTTTCCCTTTTCTCTTTTCAC ATAATTCTTGGACTCATTATGCCATATGTCATGGGTACTGGTTGGTAATTCTAAAACAGCCTCTGTGTATCCCTTCTCCG TAAATCATTTCATTCTCACATTAGGTCTAATTGCACATGCTCATTCTGGTTCCTTTTTCCTTATTTTGAGTTCTTTTAAA CAAGAAGCCATTTGCAGCTAAACTACCTCATGAGATCACCCACTTTACTCGAATCTGTGACATCAAACAAGCTTTTTCAA TAGCTGTTTATTACCTGGAAAACTCAAGATCTGGAGATCATAACTTGCAATATCATTAGTCTTGGCTCTGTGCTATCTAT CTGACTTTAATTTTTGCTACCTGATTTTGTTTAGGTTCTGCGTGGATGATGCTCTCTCGCCAATTTGTTGAATATATGTT ATGGGGATGGGATAACTTGCCGAGAGTAGTCTTGATGTATTATGCCAACTTCCTATCTTCCCCTGAAGGGTATTTTCACA CAGTCATCTGCAATGCCGAGGAGTTTCGTAACACTACTGTGAACCATGACCTCCACTTCATATCATGGGACAACCCTCCA AAGCAACACCCACACTATCTCACAATGGATAACTATCAGGGAATGCTGGACAGCAATGCTCCTTTTGCTCGGAAGTTCGG CAGGAATGAACCCCTCTTGGATAAGATTGACAGTGAAATCCTGGGACGAAATGATCATGGTTACGTACCTGGCAAATGGT TCACTCAAGCAAATCCAAACATCACCAAATCGTATTCTTTTGTAAGGAACATCACGGAACTCAGTCCCGGCCCTGGAGCA GAAAGGCTTAAACGGCTTATCAATGGCTTATTATCAGCTGAAAATTTTAAGAACAACCAGTGTGCTTGA
CDS sequence (LotjaGi4g1v0270300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGATGGGGAAACTCTCAAGAGGACGCTTAAGGCCCTTTACCATCCCAGAAACCAGTACGCTGTGCATTTGGACCT GGAGGCTCCTCCTCTTGAGAGATTGGACCTTGCTAACTTTGTCAAGAACGAGCCTCTGTTTGCTCAACTGGGTAGTGGAA ACTGGGACTGGTTCATCAATCTCAGCGCTTCTGATTATCCATTGGTTACACAAGATGATCTGCTGCATACGTTATCATCT GTTCCGCGGCACCTTAACTTCATTGAGCACACCAGTGATATTGGATGGAAGGAAGATCAGAGAGCCAAGCCTGTTATAAT TGATCCGGCACTTTATAGCATCAATAAATCTGATGTGTTTTGGGTGACAGAGAAAAGAAGTGTTCCCTCAGCATATAAAC TGTTCACAGGTTCTGCGTGGATGATGCTCTCTCGCCAATTTGTTGAATATATGTTATGGGGATGGGATAACTTGCCGAGA GTAGTCTTGATGTATTATGCCAACTTCCTATCTTCCCCTGAAGGGTATTTTCACACAGTCATCTGCAATGCCGAGGAGTT TCGTAACACTACTGTGAACCATGACCTCCACTTCATATCATGGGACAACCCTCCAAAGCAACACCCACACTATCTCACAA TGGATAACTATCAGGGAATGCTGGACAGCAATGCTCCTTTTGCTCGGAAGTTCGGCAGGAATGAACCCCTCTTGGATAAG ATTGACAGTGAAATCCTGGGACGAAATGATCATGGTTACGTACCTGGCAAATGGTTCACTCAAGCAAATCCAAACATCAC CAAATCGTATTCTTTTGTAAGGAACATCACGGAACTCAGTCCCGGCCCTGGAGCAGAAAGGCTTAAACGGCTTATCAATG GCTTATTATCAGCTGAAAATTTTAAGAACAACCAGTGTGCTTGA
Protein sequence (LotjaGi4g1v0270300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDGETLKRTLKALYHPRNQYAVHLDLEAPPLERLDLANFVKNEPLFAQLGSGNWDWFINLSASDYPLVTQDDLLHTLSS VPRHLNFIEHTSDIGWKEDQRAKPVIIDPALYSINKSDVFWVTEKRSVPSAYKLFTGSAWMMLSRQFVEYMLWGWDNLPR VVLMYYANFLSSPEGYFHTVICNAEEFRNTTVNHDLHFISWDNPPKQHPHYLTMDNYQGMLDSNAPFARKFGRNEPLLDK IDSEILGRNDHGYVPGKWFTQANPNITKSYSFVRNITELSPGPGAERLKRLINGLLSAENFKNNQCA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 51 | 51 | 3.5E-182 | – | |
| PANTHER | 1 | 51 | 51 | 3.5E-182 | – | |
| PANTHER | 52 | 306 | 255 | 3.5E-182 | – | |
| PANTHER | 52 | 306 | 255 | 3.5E-182 | – | |
| Pfam | 52 | 215 | 164 | 1.0E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi4g1v0270300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…