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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003406
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 105 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 6.392s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0134729.1
n.a. PREDICTED: xylosyltransferase 2-like isoform X2 [Cicer arietinum] gi|502084552|ref|XP_004487713.1| chr0 61822554 61824862 -
2 domain predictions
1 GO term
Lj0g3v0162119.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 1 [Theobroma cacao] gi|508708200|gb|EOY00097.1| chr0 76399263 76406447 -
2 domain predictions
1 GO term
Lj0g3v0224599.1
n.a. PREDICTED: LOW QUALITY PROTEIN: xylosyltransferase 2-like [Glycine max] gi|356504384|ref|XP_003520976.1| chr0 116039504 116044020 -
2 domain predictions
1 GO term
Lj0g3v0224599.2
n.a. PREDICTED: xylosyltransferase 2-like [Cicer arietinum] gi|502146758|ref|XP_004506594.1| chr0 116039504 116044020 -
2 domain predictions
1 GO term
Lj0g3v0232679.1
n.a. Xylosyltransferase [Medicago truncatula] gi|357444527|ref|XP_003592541.1| chr0 120764942 120766280 +
2 domain predictions
1 GO term
Lj0g3v0282169.1
n.a. PREDICTED: xylosyltransferase 2-like isoform X1 [Cicer arietinum] gi|502084545|ref|XP_004487712.1| chr0 146305298 146307794 +
2 domain predictions
1 GO term
Lj0g3v0282329.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Theobroma cacao] gi|508778216|gb|EOY25472.1| chr0 146365733 146366308 -
2 domain predictions
1 GO term
Lj0g3v0311129.1
n.a. PREDICTED: xylosyltransferase 1-like [Cicer arietinum] gi|502122430|ref|XP_004497742.1| chr0 162469281 162473461 -
2 domain predictions
1 GO term
Lj0g3v0311129.2
n.a. PREDICTED: xylosyltransferase 1-like [Cicer arietinum] gi|502122430|ref|XP_004497742.1| chr0 162472386 162473461 -
2 domain predictions
1 GO term
Lj0g3v0316559.1
n.a. Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [Medicago truncatula] gi|358345115|ref|XP_003636628.1| chr0 165371399 165373704 -
2 domain predictions
1 GO term
Lj0g3v0326869.1
n.a. PREDICTED: xylosyltransferase 2-like isoform X1 [Cicer arietinum] gi|502084545|ref|XP_004487712.1| chr0 170870506 170870955 +
2 domain predictions
1 GO term
Lj0g3v0326879.1
n.a. PREDICTED: xylosyltransferase 2-like [Glycine max] gi|356517136|ref|XP_003527246.1| chr0 170874277 170874765 +
2 domain predictions
1 GO term
Lj0g3v0355989.1
n.a. Xylosyltransferase [Medicago truncatula] gi|357444527|ref|XP_003592541.1| chr0 187533302 187535175 -
2 domain predictions
1 GO term
Lj0g3v0361699.1
n.a. PREDICTED: xylosyltransferase 1-like [Glycine max] gi|356529050|ref|XP_003533110.1| chr0 190552070 190554161 -
2 domain predictions
1 GO term
Lj0g3v0363169.1
n.a. Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [Medicago truncatula] gi|358345115|ref|XP_003636628.1| chr0 191542418 191544686 -
2 domain predictions
1 GO term
Lj1g3v1899580.1
n.a. core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|15236739|ref|NP_194956.1| chr1 22602190 22603218 -
2 domain predictions
1 GO term
Lj1g3v1965170.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 1 [Theobroma cacao] gi|508781925|gb|EOY29181.1| chr1 23229968 23238582 +
2 domain predictions
1 GO term
Lj1g3v1965170.2
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 1 [Theobroma cacao] gi|508781925|gb|EOY29181.1| chr1 23231493 23238582 +
2 domain predictions
1 GO term
Lj1g3v3981470.1
n.a. PREDICTED: xylosyltransferase 1-like [Glycine max] gi|356571785|ref|XP_003554053.1| chr1 47375108 47379540 +
2 domain predictions
1 GO term
Lj1g3v3981470.2
n.a. PREDICTED: xylosyltransferase 1-like [Glycine max] gi|356571785|ref|XP_003554053.1| chr1 47375163 47376426 +
2 domain predictions
1 GO term
Lj2g3v0932840.1
n.a. BC10 protein [Medicago truncatula] gi|357520047|ref|XP_003630312.1| chr2 14822616 14828962 +
2 domain predictions
1 GO term
Lj2g3v1024210.1
n.a. PREDICTED: xylosyltransferase-like [Cicer arietinum] gi|502090867|ref|XP_004489366.1| chr2 16319257 16322880 -
2 domain predictions
1 GO term
Lj2g3v1024210.2
n.a. PREDICTED: xylosyltransferase-like [Cicer arietinum] gi|502090867|ref|XP_004489366.1| chr2 16319257 16322370 -
2 domain predictions
1 GO term
Lj2g3v1080730.1
n.a. core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|15239393|ref|NP_197915.1| chr2 17647129 17648223 -
2 domain predictions
1 GO term
Lj2g3v1253840.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 1 [Theobroma cacao] gi|508708200|gb|EOY00097.1| chr2 20002873 20007792 -
2 domain predictions
1 GO term
Lj3g3v0429720.1
n.a. PREDICTED: xylosyltransferase 2-like [Glycine max] gi|356517136|ref|XP_003527246.1| chr3 4457778 4461717 +
2 domain predictions
1 GO term
Lj3g3v1294570.1
n.a. core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|30688302|ref|NP_680193.2| chr3 16516808 16519234 -
2 domain predictions
1 GO term
Lj3g3v1472510.1
n.a. PREDICTED: xylosyltransferase 1-like [Cicer arietinum] gi|502120479|ref|XP_004496976.1| chr3 18701498 18705903 +
2 domain predictions
1 GO term
Lj3g3v2058540.1
n.a. PREDICTED: xylosyltransferase 1-like [Glycine max] gi|356523099|ref|XP_003530179.1| chr3 26482366 26485365 -
2 domain predictions
1 GO term
Lj3g3v2719900.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Theobroma cacao] gi|508782594|gb|EOY29850.1| chr3 33263414 33266903 -
2 domain predictions
1 GO term
Lj3g3v2769490.1
n.a. PREDICTED: xylosyltransferase 1-like [Glycine max] gi|356517552|ref|XP_003527451.1| chr3 34159705 34165488 -
2 domain predictions
1 GO term
Lj4g3v1878140.1
n.a. PREDICTED: xylosyltransferase 1-like [Cicer arietinum] gi|502151573|ref|XP_004508507.1| chr4 25832798 25836172 +
2 domain predictions
1 GO term
Lj4g3v2133910.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Theobroma cacao] gi|508784748|gb|EOY32004.1| chr4 29279860 29287822 -
2 domain predictions
1 GO term
Lj4g3v2133910.2
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Theobroma cacao] gi|508784748|gb|EOY32004.1| chr4 29279860 29289210 -
2 domain predictions
1 GO term
Lj5g3v0358780.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Theobroma cacao] gi|508782594|gb|EOY29850.1| chr5 3421020 3424550 +
2 domain predictions
1 GO term
Lj5g3v0358790.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Theobroma cacao] gi|508782594|gb|EOY29850.1| chr5 3421020 3425416 +
2 domain predictions
1 GO term
Lj5g3v0585470.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 1 [Theobroma cacao] gi|508781925|gb|EOY29181.1| chr5 6790585 6797746 +
2 domain predictions
1 GO term
Lj5g3v2151530.1
n.a. PREDICTED: xylosyltransferase 1-like [Cicer arietinum] gi|502120479|ref|XP_004496976.1| chr5 30787999 30789812 -
2 domain predictions
1 GO term
Lj5g3v2182530.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 1 [Theobroma cacao] gi|508708200|gb|EOY00097.1| chr5 31610774 31613440 -
2 domain predictions
1 GO term
Lj6g3v0144920.1
n.a. Os03g0648100 [Oryza sativa Japonica Group] gi|115454351|ref|NP_001050776.1| chr6 1522582 1528316 -
2 domain predictions
1 GO term
Lj6g3v1355420.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Theobroma cacao] gi|508784748|gb|EOY32004.1| chr6 16055211 16061800 +
2 domain predictions
1 GO term
Lj6g3v1355420.2
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Theobroma cacao] gi|508784748|gb|EOY32004.1| chr6 16055211 16060584 +
2 domain predictions
1 GO term
Lj6g3v1812140.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 2 [Theobroma cacao] gi|508781516|gb|EOY28772.1| chr6 20251895 20257789 +
2 domain predictions
1 GO term
Lj6g3v1812140.2
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 2 [Theobroma cacao] gi|508781516|gb|EOY28772.1| chr6 20251895 20257789 +
2 domain predictions
1 GO term
LotjaGi0g1v0001200.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT1G10280.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|E9Q4F7|ANR11_MOUSE Ankyrin repeat domain-containing protein 11; TrEMBL-Plants: tr|A0A151T894|A0A151T894_CAJCA Uncharacterized protein; Found in the gene: LotjaGi0g1v0001200 LjG1.1_chr0 1640514 1643761 +
2 domain predictions
1 GO term
LotjaGi1g1v0237000.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT3G15350.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9FLD7|GT14A_ARATH Beta-glucuronosyltransferase GlcAT14A; TrEMBL-Plants: tr|G7IRB3|G7IRB3_MEDTR Core-2/I-branching enzyme; Found in the gene: LotjaGi1g1v0237000 LjG1.1_chr1 56402345 56405906 +
2 domain predictions
1 GO term
LotjaGi1g1v0383100.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, putative; TAIR: AT5G25330.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q6EVZ2|TI214_NYMAL Protein TIC 214; TrEMBL-Plants: tr|G7JAJ3|G7JAJ3_MEDTR Core-2/I-branching enzyme; Found in the gene: LotjaGi1g1v0383100 LjG1.1_chr1 86656813 86658501 -
2 domain predictions
1 GO term
LotjaGi1g1v0392700.1
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT4G31350.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|P42257|PILJ_PSEAE Protein PilJ; TrEMBL-Plants: tr|G7JCC4|G7JCC4_MEDTR Core-2/I-branching enzyme; Found in the gene: LotjaGi1g1v0392700 LjG1.1_chr1 87707084 87720429 +
2 domain predictions
1 GO term
LotjaGi1g1v0392700.2
n.a. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT4G31350.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q12564|CHSA_AMPQU Chitin synthase A; TrEMBL-Plants: tr|G7JCC4|G7JCC4_MEDTR Core-2/I-branching enzyme; Found in the gene: LotjaGi1g1v0392700 LjG1.1_chr1 87711905 87720364 +
2 domain predictions
1 GO term
LotjaGi1g1v0648900.1
n.a. Xylosyltransferase 1; TAIR: AT3G03690.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9FLD7|GT14A_ARATH Beta-glucuronosyltransferase GlcAT14A; TrEMBL-Plants: tr|A0A172J2E4|A0A172J2E4_PUEML UDP-glycosyltransferase 5; Found in the gene: LotjaGi1g1v0648900 LjG1.1_chr1 120682200 120687247 +
2 domain predictions
1 GO term