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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0380000 |
| Transcript ID | LotjaGi4g1v0380000.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240; TrEMBL-Plants: tr|I3S9Y2|I3S9Y2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75919889..75921598) extracted from Lotus japonicus Gifu genome v1.2.
ATAACAAAGTGAAATTCTCTGCAGCTCATGTTCAGCAAGTTTGAATATGATGGTAAATTAAATGGAACTTTTGTGGAAGG TCCATTTGAGCTTCCTGTATCTAGCATTCGGGCGTACATAAAGGATCCAATAACGCCCAGGTTTAGCCTTATCCTTTTGA CTATCTTTCCACTCCGTTTTTCACTGATATGCTTAATCTTTTGTTGCACACTTTCTTTGTGTCACATTTAGATTTGTACA CGTGGGTTCAGCTGGAGTTACCAGACCTGAAAGGCCTGGACTTGATCTAAGTAAACAGCCTCCGGCTGTTCGATTAAACA AGGAATTGGGTTCTATCCTTACATTTAAACTAAAGGTAAGAAAAAAAACTGGTGATGACTCCTTGTTTGTGACAGATATA GTACCAAATTTTCAGGTCTCCAGTTTGCATAAAATTGGTGTATATTAGGTCTTTGCTCTGCAAAACTGGTTTTATTGCTT AAGATTTTTTCAGATATGAAACTAGAAGCTGAAATTTAGCACCCTAGTACTGTTCATTGAGATAGAGCTAGCCATCAGAA ATTCTATTTTTAACTCTCCAGATATGCTTAACATCTTCAATATCTATTGTATTGGTTGTATCTTCTTGATTGAAAATGTA AGAATAATATGCTGGTTTAGTGATAGAGGTTAAGTAAACTACTTACCAAGCGGACCATCTAATTATGAGAAATCTGAAAG GTCGAGCTAAAGTGTATTGTTTTAGCTGAAAAGTGCACATTTGATGGTGTGTTCGCTACATATTTTCAGATGATATTTAC ACATGAAAATTCCCTTGTATATCTCATATGACTGATATGAGTAACAAATTGTTAAACTGTTTTCACCACATAACCCACTT GCCGAGATGGTAGGGCTAGTTGATTAACCATGTGTGAACATATTTAACTAATATACAACAATTGAAATTTGAAATTTTCT GTAGTTTCAGAGTGACTTTAGAGACTTGCAGAAGTAGAGAAATTCTACTTCATAAAGAGATGTTCAATAAACCTTATTGT TTATGATAACTTATTTCCATATCCTATTGTCACTTCACGCATTTCTTCATTTGCTAACAGTGGTTAGTGTTGCAACAGGG TGAGGACTTAATTCGAGAAAGCGGCATTCCCTATGCAATCGTGAGGCCTTGTGCATTAACTGAGGAGCCTGCTGGAGCCG ATCTTATCTTTGAACAAGGAGATAATATTACGGTATTTTGAAAACAAAAGATAATGGATGCTTTTCTAAGTTCCAGTTCT CTTGCTGAACTCCCTATCTCACAATGTGAAAAATAACAGGGTAAAATATCAAGGGAAGAGATTGCTCGTTTGTGTGTAGC TGCACTTGAAAGCCCCTATGCATGTGACAAAACATTTGAGGTCAGCCTTTTCCTTATTATCTCCATATAATGTAAACTAA TGTGAAATACCACAACCACAGTTTATTGCTTTTTTAATATGCTCAAAAATCAAAATAGTCCTTAGTTAACTCTAACATTA TGAGTTAGCCTCTGGGATTATATTAGGTCTGATCCTATTGCAGGTCAAAAGTGTTGTTCCATTTAGCGAGCCGTTTACTC TGGATCCAGCAAATCCTCCTCCGGAAAAGGACTACAATGTGTACTTTAAAGATTTAAAAGAAGGAATCACTGGGAAGGAA GCCCTCCAACAAAATCCCGTACCTGTTTAG
CDS sequence (LotjaGi4g1v0380000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCAGCAAGTTTGAATATGATGGTAAATTAAATGGAACTTTTGTGGAAGGTCCATTTGAGCTTCCTGTATCTAGCAT TCGGGCGTACATAAAGGATCCAATAACGCCCAGATTTGTACACGTGGGTTCAGCTGGAGTTACCAGACCTGAAAGGCCTG GACTTGATCTAAGTAAACAGCCTCCGGCTGTTCGATTAAACAAGGAATTGGGTTCTATCCTTACATTTAAACTAAAGGGT GAGGACTTAATTCGAGAAAGCGGCATTCCCTATGCAATCGTGAGGCCTTGTGCATTAACTGAGGAGCCTGCTGGAGCCGA TCTTATCTTTGAACAAGGAGATAATATTACGGGTAAAATATCAAGGGAAGAGATTGCTCGTTTGTGTGTAGCTGCACTTG AAAGCCCCTATGCATGTGACAAAACATTTGAGGTCAAAAGTGTTGTTCCATTTAGCGAGCCGTTTACTCTGGATCCAGCA AATCCTCCTCCGGAAAAGGACTACAATGTGTACTTTAAAGATTTAAAAGAAGGAATCACTGGGAAGGAAGCCCTCCAACA AAATCCCGTACCTGTTTAG
Protein sequence (LotjaGi4g1v0380000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSKFEYDGKLNGTFVEGPFELPVSSIRAYIKDPITPRFVHVGSAGVTRPERPGLDLSKQPPAVRLNKELGSILTFKLKG EDLIRESGIPYAIVRPCALTEEPAGADLIFEQGDNITGKISREEIARLCVAALESPYACDKTFEVKSVVPFSEPFTLDPA NPPPEKDYNVYFKDLKEGITGKEALQQNPVPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 191 | 191 | 3.0E-114 | – | |
| PANTHER | 1 | 191 | 191 | 3.0E-114 | ||
| Gene3D | 25 | 153 | 129 | 6.1E-23 | – | |
| SUPERFAMILY | 36 | 147 | 112 | 1.25E-11 | ||
| Pfam | 37 | 136 | 100 | 2.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitochondrial respiratory chain complex I assembly | The aggregation, arrangement and bonding together of a set of components to form mitochondrial respiratory chain complex I. |
Expression pattern of LotjaGi4g1v0380000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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