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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0386000 |
| Transcript ID | LotjaGi4g1v0386000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine-zipper protein; TAIR: AT1G30490.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q6AST1|HOX32_ORYSJ Homeobox-leucine zipper protein HOX32; TrEMBL-Plants: tr|A0A151UC57|A0A151UC57_CAJCA Homeobox-leucine zipper protein HOX32; Found in the gene: LotjaGi4g1v0386000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76432759..76438764) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTCTTTCTGTGCTTGGAGACTCATCATCAAGCAAGGACATGGATTCTGGCAAGTATGTGAGGTATACTCCTGAGCA AGTGGAAGCTTTGGAGAGGTTGTATGCTGAATGTCCAAAGCCAAGTTCTTCCAGAAGGCACCAACTCATTAGGGAGTGTC ACATCCTTGCTAACATTGAACCTAAACAGATCAAAGTTTGGTTTCAGAATCGTAGGTAAGGTGTTTGTTTGAATGATTCA TTGAATGGTTTCAGAGCTTCTACTTCATTTTAAAGTTTTGCTTTTTTACTTTTTTACTTTTTGGGTCTGAGTGTGAGTGT GAGTTGAGTTATCTGGCTGACATTTTTCTTCTCCTCACTTGGTCAAATGGTGACTTTGAGCTTCTTACTCTTAGTAAGGT TTCTTAGCTTGCAAATGGTAGTTTATATTGTCATTCAGTATTTTTGCCTTTTTTTTTTTTGCTTTCATGCTTGGAATGGC ATTTCTTTTAATAAACTTGGAATACCATGAAAAAAGGTTTCATTTTTTCATATGCTTTTACTGTTTAGGTTCAATTTTGA AAGAAATATTCTTATTTGCTAGAAAGAGAAGAGTTTATCATGCCTTCTTGAGAGAAAGACATACTGGGAAAGTTACTTCA TTTTTATCATTTTCCTTTTAGACATTATAGTCATTAAGATTATCGTTATTAGTTATTTTCTTAGAGAAAGGGATTTCTTT TCTGAGTGGAGATAATGACAACAAGTCAATTACTCCTGCTGTTGAAATTTTCTCTTCTGCTTTCCTCTGACTCCCATTAT TTAGGCCATTTTATCATTTTTGAGAAAGATGCTGTAACAGAAATATTGTTATGATCACCTTTTGTTTTGGGGTTGGTTGT GGATGGAATGAAGGATAAAGACAGCTGAGTTTGATGACTTTAGCTTTTACTTTTGACTTTCATATTTTTTAAAACAAGTA TTTGATTCATGCCTCATGTTTTGTTTTAACCTCTAATTTTCCTTCAAAATCTTGTTCCTGCTTTAATATTTTATATATTT ATTAAATGCAAATGAATATTGATTTGTCATGTTTCCACTCTTTTGGCTTCACTCAGTAGTTTTGGTCTGCTTGTGGTATG ATGAGAAAAGAAAATTGGGAAACTTCAAAGAAAGAAATGAATAATGAATAACTATCATACAATGTTGTGGCAAATTTTAA AGGAAAGTGGTTCACACCACATTCTACTTGACATGCTTTTTATAATGGAAATGTAGTTAATGTAGTCTTCAACACTGTTT CCTCATTGTTAACATGACTGATGTTGCCAATTTTCTTCTATAGATGCCGCGAAAAGCAGCGCAAGGAATCATCTCGCCTG CAGACAGTGAATAGAAAGCTGACTGCGATGAATAAGTTGTTAATGGAAGAGAATGACCGTCTGCAGAAGCAGGTCTCAAA GTTGGTTTATGATAATGGATACATGAAACAACAAGTGCAGACCGTAAGTACCTCTCTCTTTGGGTAGTTGCTCTTCTTAA TTCTCCTTCTGAATGTGTTGTTAATGAAAAATCTTTTTTTGATTATGTCTTGGCAGGCATCTGCTACTACTACAGACAAT AGCTGTGAGTCTGTGGTAATGAGTGGTCAGCAACACCAACAGCTATTCCCCAAAACTAAGCATCCCCAGTGGGATGCTAA TAACCCAGCTGGGTAAGTAACTCAATGTATGCTAACAAATTTGTTCGACATATATTCACTTAATTGTGTCGGGATGTCCT AATTCTCTTTTATGCCAGTCTTCTCGCAATAGCTGAGGAGGCCCTGGCAGAGTTCCTTTCCAAGGCTACCGGAACTGCTG TCAACTGGGTCCCAATGATTGGGATGAAGGTATGATCTTCTGATAATTCTTCATGGTCATTGCATGTATAAATTGTTCTT TGGTACATTTCAATATTTATATTTTCCTTGTCATGCTTTCTAATTTCTCTCTCATGTAGCCTGGTCCGGATTCTATTGGC ATCGTTGCTGTTTCCCGCAACTGTCGTGGGGTAGCAGCCCGAGCCTGCGGCCTTGTGAGCCTTGAGCCCGCAAAGGTGTG TAGTATATTGATGCATGTGTATTGTAAATTTTCTTCTTGTCACTGAGCAATGAGACTTCAATTTTGTTACTTAATTTCAT ACTTGATTGTTGCAGGTTGCTGAGATTCTTAAAGATCGTCCATCTTGGTATCGTGACTGCCGATGCCTCAATGTTTTGAG CATAGTCCCCACTGCAAATGGGGGCATAATAGAGCTCTTGTATATGCAGGTCTAATAGTTATTTTAATCTACAAAAGATG TCTAACTGCAGTCTAAATTACTTTTTGATTTCTACTATGTTGTTTTCTTGATATTTGGGTTTGGATTTTCCTTAGACCTA TGCTCCTACAACATTGGCTGCAGCAAGAGACTTCTGGACACTACGATACACAACAAGTTTGGAAGATGGAAGTCTTGTGG TACGGAGCAGAATCTTGACTGTTGTGTTTTTCTTGATTTAGGATGTGACTTCCTTCTTAGCAAGCATTTGCCTTGAGAAA ATAACTGCCTATTGTTTATCTACCTCGCAGATTTGTGAGAGATCCTTGACTTCTTCAATTGGTGGTCCAACAGGGCCTCC TGCTTCAAGCTTCGTAAGAGCTGAAATGTTTCCTAGTGGCTATCTAATTAGATCCTGTGAGGGTGGTGGATCTATTATTC ACATTGTTGATCACGTTGATTTAGATGTGAGGATGACGATGCAATTGAAGTCATTTTAAGATTTCTACATTTTTGAATTT TGCTCTCCTAGTCCTAAGTATATTAACCTTGTTGTTGATATAGATTCGGAGTGTTCCTGAAGTATTGAGGCCCCTCTATG AATCACCTAAAAATTTGGCTCAAAAATCAACTATTGCTGTAAGATATCTTACAAGTGACAGATCTACATGTTTGACCATG TCAAAATTTGTTAACAATTCTGAATATACTGTACAGGCTTTGCGACATGTAAGACAAATTGCACAAGAATCAAGTGGAGA AGTTCATTATGGTGGGGGACGTCAGCCTGCTGTCTTGAGGACATTTAGTCAACGACTTTGCAAGTAAGACCATATCATGC TTTGTTTTTCCAGAATCATTGCAAAGTTGGGCATTTGACTAAGCTTTGCCTTCCTTATTGACCAATAATTATTTGAAATT TGATTCTTAGAGGGTTCAATGATGCTGTCAATGGGTTTGCGGATGATGGTTGGTCACTGATGGGTAATGATGGGGTGGAA GACGTGACAATAGCCATAAACTCATCTCAAAACAAGTTTTTTGGCTCTCATTATAATACATCGTTGCTCCCACCATTTGG AGGTGGGGTCCTTAGTGCCAAGGCATCAATGCTGCTGCAGGTACCTCCTAAGCAAACAAATACATGTGCAAATTATTATT TTTGTTGAAATTAACTCTAGTAAAATGATAATTGATTCCTAGGACTTTTCCTCCATGAGGTCCCATATTTTAACTTGCTG TCATCTTCTGGATTTTCAGTTTATTTATTTATCTTGGTTATTATTGATTACAAGACGTTGCTCTGCAGAATGTTCCTCCT CCTTTGCTTGTTCGCTTCTTGAGAGAGCATCGTTCTGAGTGGGCTGATTATGGAGTTGATGCATATTCAGCTGCATGTCT TAAAGCTAGTCCTTATGCAGTTCCTTGTGCAAGGCCCGTTAGCTACCCCAGCAGCCAGGTCATTTTACCCCTTGCTCCTA CTGTGGAGCATGAGGAGGTATTAATCTCTTCAAATTAGTGATGACCAGTGAACTTTATTCTGTCTTGCTATTATGCATGC TCATTTGCCACCCACTGTAATGATGCAGTTCTTGGAGGTAGTTCGTATAGAAGGTCATGTTTTTCCCCCTGAAGATTTGC CTTTGGCTGGTGATATGTATCTCTTGCAGGTAAATGTCATTTGTCTACATATTTGTTTAAGTATTTAGCTGGAAACTATT GCTTTTTCATTGAATGATGCTTATTTACTTTTTACTTACGCTACTTGATATGGCAGCTGTGCGGTGGAGTTGATGAAAGT GCAATTGGAGCATGTGCACAGCTGGTGTTTGCGCCTATTGATGAATCATTTGCAGATGATGCTCTCTTACTGCCTTCTGG TTTCCGCATCATAGCATTGGATCCTAAAACAGTTCAGTTACACTCTAAGCTATTTAATAGTTTTGAAGGAATATGGTTAT GAATTTTTGTCGGTTATTTTCCTTTCTTTTTCATTAGCATTTTAACTACTTGGACCCTGAAACGTTTTGCTTCGTTTGGA AATGCGTAGTCTCTGAATTGTTATGAAATTCCAAATTCAACCATGGAATTAGTAAAGGTAGAATGTTGTAGTTTATGTAA ATGCATGTGTATAAATCCATCCTATATACCCTTATAGTTGCCAGTCTTTTTTTACTATCAAGGTACCTTGTTTCACCCCC CCCCCCATTTTTCTTGTCAGGATGGGCCGGCTGCAACTAGGACCTTGGATTTGGCATCGACACTGGAAATAGGATCTAGT AATGCTCGTCTAGCTGGTGAAGGCAATTTGAACAACTACAACCTGAAGTCGGTCCTTACAATTGCATTCCAGTTTTCCTT TGAGAACCATTTGCAGGACAATGTAGCTGCTATGGCTCGCGATTATGTGCGTAATGTTGTGCGATCTGTTCAGAGGGTTG CCATGGCAATCACTCCCTCTCCGTTCAGTGCCCAGCTAGGGCAGAAGTCCCTTCCCGGCCCCCCTGAGGCTCTTACTTTA GCACGATGGATCTATAGAAGCTACAGGTTTGTGCCATTAGTCTTGACTCCAACTCTCTTTTTGCTGTTATTAATTAAGCT TCCTCAACCATTTGATTTTCTTGTCTAGAGTTGTCTTGAAGATTAGTTAAAATTACTTGTCTGTTATTTGCAGCTTATAA TTTTATTTAGGTTCTAATAACAAGATTTTGTCTGTTGAGAATTTTGACTTCATACTTATAACCTGCAGTTTGCTGTTTAG CTATATCCTGTGTGATTATCTGGTGACGGTTCATCTTCAGCCACAAATTGCATGGATATAAACTCACTTGATTCACTGGA AGTGAAATTTTACCATCTTTTTTCTTGTGTCTGGTCTGATAGAAAATAATGTTTCTTTCAGGGTCCACACCGGCACTGAG CTTTCTAGAGTTGAGTCCACATGTGGCGATGCAATCATAAAGAAACTTTGGCACCATTCAGATGCAATAATTTGCTGTTC TATAAAATCAATTGTAATGACTTGCTGCTTCTCTATTAAAGTGCTTGTCATTTGCGCAATAGCCTCTATTAATTTGTCTA TTGATGCCAAAATTACTGCAGGCATCTCCAGTGTTCACCTTTGCAAACCAAGCTGGACTTGACATGCTTGAAACCACTCT CGTTACTCTTCAAGATATAATGCTCGATAAAGTTCTTGATGAAGCTGGCAGGAAGATTCTCTGCATGGAGTTCTCCAAGA TAATGCAACAGGTGATTAACTTTGTAAACTTCAGATTATCTGTTTTGGCAGGGCTTAAAAATTAGTTTAATGGCATGTTT AGATCTGACTTTAGACTCAATTGTAGAAGAATTTCCAAACATGCTATAAGCCATTTTTCTTATGAGTGCTGGATTGAAAT AAGAAATGGTTCCGCATTGGAAATTGCAGAACAAGTTATAACAAGTTAAAGAATCTGAGATTTTCTAGAACTTGGGGTAG GAAACTAAGTTATAACTTATAACATGTTATTTCTATCTTCTACATGCATATGTTTGAGCTGTGATTAGTGTCTTATGCAA TAATTTCTTTACATTTCAGGGATTTGCATATCTGCCAGCTGGAATATGTGTATCCAGTATGAATCGACCTGTGTCGTATG AGCAGGCCATAGTATGGAAAGTTCTGGATGACCACGATTCCAATCACTGCCTTGCCTTCATGTTCATGAACTGGTCTTTT GTTTGA
CDS sequence (LotjaGi4g1v0386000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATAAGTTGTTAATGGAAGAGAATGACCGTCTGCAGAAGCAGGTCTCAAAGTTGGTTTATGATAATGGATACATGAA ACAACAAGTGCAGACCGCATCTGCTACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAGCAACACCAAC AGCTATTCCCCAAAACTAAGCATCCCCAGTGGGATGCTAATAACCCAGCTGGTCTTCTCGCAATAGCTGAGGAGGCCCTG GCAGAGTTCCTTTCCAAGGCTACCGGAACTGCTGTCAACTGGGTCCCAATGATTGGGATGAAGCCTGGTCCGGATTCTAT TGGCATCGTTGCTGTTTCCCGCAACTGTCGTGGGGTAGCAGCCCGAGCCTGCGGCCTTGTGAGCCTTGAGCCCGCAAAGG TTGCTGAGATTCTTAAAGATCGTCCATCTTGGTATCGTGACTGCCGATGCCTCAATGTTTTGAGCATAGTCCCCACTGCA AATGGGGGCATAATAGAGCTCTTGTATATGCAGACCTATGCTCCTACAACATTGGCTGCAGCAAGAGACTTCTGGACACT ACGATACACAACAAGTTTGGAAGATGGAAGTCTTGTGATTTGTGAGAGATCCTTGACTTCTTCAATTGGTGGTCCAACAG GGCCTCCTGCTTCAAGCTTCGTAAGAGCTGAAATGTTTCCTAGTGGCTATCTAATTAGATCCTGTGAGGGTGGTGGATCT ATTATTCACATTGTTGATCACGTTGATTTAGATATTCGGAGTGTTCCTGAAGTATTGAGGCCCCTCTATGAATCACCTAA AAATTTGGCTCAAAAATCAACTATTGCTGCTTTGCGACATGTAAGACAAATTGCACAAGAATCAAGTGGAGAAGTTCATT ATGGTGGGGGACGTCAGCCTGCTGTCTTGAGGACATTTAGTCAACGACTTTGCAAAGGGTTCAATGATGCTGTCAATGGG TTTGCGGATGATGGTTGGTCACTGATGGGTAATGATGGGGTGGAAGACGTGACAATAGCCATAAACTCATCTCAAAACAA GTTTTTTGGCTCTCATTATAATACATCGTTGCTCCCACCATTTGGAGGTGGGGTCCTTAGTGCCAAGGCATCAATGCTGC TGCAGAATGTTCCTCCTCCTTTGCTTGTTCGCTTCTTGAGAGAGCATCGTTCTGAGTGGGCTGATTATGGAGTTGATGCA TATTCAGCTGCATGTCTTAAAGCTAGTCCTTATGCAGTTCCTTGTGCAAGGCCCGTTAGCTACCCCAGCAGCCAGGTCAT TTTACCCCTTGCTCCTACTGTGGAGCATGAGGAGTTCTTGGAGGTAGTTCGTATAGAAGGTCATGTTTTTCCCCCTGAAG ATTTGCCTTTGGCTGGTGATATGTATCTCTTGCAGCTGTGCGGTGGAGTTGATGAAAGTGCAATTGGAGCATGTGCACAG CTGGTGTTTGCGCCTATTGATGAATCATTTGCAGATGATGCTCTCTTACTGCCTTCTGGTTTCCGCATCATAGCATTGGA TCCTAAAACAGATGGGCCGGCTGCAACTAGGACCTTGGATTTGGCATCGACACTGGAAATAGGATCTAGTAATGCTCGTC TAGCTGGTGAAGGCAATTTGAACAACTACAACCTGAAGTCGGTCCTTACAATTGCATTCCAGTTTTCCTTTGAGAACCAT TTGCAGGACAATGTAGCTGCTATGGCTCGCGATTATGTGCGTAATGTTGTGCGATCTGTTCAGAGGGTTGCCATGGCAAT CACTCCCTCTCCGTTCAGTGCCCAGCTAGGGCAGAAGTCCCTTCCCGGCCCCCCTGAGGCTCTTACTTTAGCACGATGGA TCTATAGAAGCTACAGGGTCCACACCGGCACTGAGCTTTCTAGAGTTGAGTCCACATGTGGCGATGCAATCATAAAGAAA CTTTGGCACCATTCAGATGCAATAATTTGCTGTTCTATAAAATCAATTGCATCTCCAGTGTTCACCTTTGCAAACCAAGC TGGACTTGACATGCTTGAAACCACTCTCGTTACTCTTCAAGATATAATGCTCGATAAAGTTCTTGATGAAGCTGGCAGGA AGATTCTCTGCATGGAGTTCTCCAAGATAATGCAACAGTGTCTTATGCAATAA
Protein sequence (LotjaGi4g1v0386000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNKLLMEENDRLQKQVSKLVYDNGYMKQQVQTASATTTDNSCESVVMSGQQHQQLFPKTKHPQWDANNPAGLLAIAEEAL AEFLSKATGTAVNWVPMIGMKPGPDSIGIVAVSRNCRGVAARACGLVSLEPAKVAEILKDRPSWYRDCRCLNVLSIVPTA NGGIIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSIGGPTGPPASSFVRAEMFPSGYLIRSCEGGGS IIHIVDHVDLDIRSVPEVLRPLYESPKNLAQKSTIAALRHVRQIAQESSGEVHYGGGRQPAVLRTFSQRLCKGFNDAVNG FADDGWSLMGNDGVEDVTIAINSSQNKFFGSHYNTSLLPPFGGGVLSAKASMLLQNVPPPLLVRFLREHRSEWADYGVDA YSAACLKASPYAVPCARPVSYPSSQVILPLAPTVEHEEFLEVVRIEGHVFPPEDLPLAGDMYLLQLCGGVDESAIGACAQ LVFAPIDESFADDALLLPSGFRIIALDPKTDGPAATRTLDLASTLEIGSSNARLAGEGNLNNYNLKSVLTIAFQFSFENH LQDNVAAMARDYVRNVVRSVQRVAMAITPSPFSAQLGQKSLPGPPEALTLARWIYRSYRVHTGTELSRVESTCGDAIIKK LWHHSDAIICCSIKSIASPVFTFANQAGLDMLETTLVTLQDIMLDKVLDEAGRKILCMEFSKIMQQCLMQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 707 | 707 | 0.0 | – | |
| PANTHER | 1 | 707 | 707 | 0.0 | – | |
| ProSiteProfiles | 65 | 265 | 201 | 24.799 | ||
| CDD | 69 | 285 | 217 | 1.26565E-71 | – | |
| SMART | 74 | 284 | 211 | 5.8E-45 | ||
| SUPERFAMILY | 75 | 286 | 212 | 4.26E-34 | – | |
| Pfam | 75 | 283 | 209 | 9.5E-47 | ||
| Gene3D | 108 | 291 | 184 | 7.2E-18 | ||
| Pfam | 609 | 707 | 99 | 2.4E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi4g1v0386000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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