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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0404500 |
| Transcript ID | LotjaGi4g1v0404500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein, putative; TAIR: AT4G39460.1 S-adenosylmethionine carrier 1; Swiss-Prot: sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7L6P2|K7L6P2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0404500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78091295..78095845) extracted from Lotus japonicus Gifu genome v1.2.
CTGTCTGCTGTTTGGTTGAGGTATCTGCTTCTCATTTTAGCTGGATGTTTGGTTTTGCAGATGCTTGTACTAAGAGAAAA CAGAACATGCTTCTGAGAAATTCTTTTGCATCAGTTACCATTGGAGAGGAGAAGCCCTTTGACTTCTTACGCACTTTATT TGGTATGTGCAAGATCTCCTTTGGTGTTCCTAGTGAAGAAGTTTGTCATTATTGTTTTGCCATTGTAGTCAAATCTGATT AGTGTCACCAATGAAGTATTGTTATTCTTATAAAAGTGAAAAATGGTAAAAAAATTGGTGAGTTAATCCTTCATATATAG AGTTAAGAACTGGAGTTTCCTCCCCTCTTAGTAGTTTTTTAGTTTCTTGATAAGTTGGTACACGATACTATGATCTTGAT CAGTTTACTGCATTTCAATCTTTCTGACGAGCCTAATGGAATTTGCAGAGGGTGTTATTGCTGGAGGTACAGCTGGAGTT GTTGTTGAAACAGCTTTATACCCAATTGACACTATAAAAACACGTCTACAGGCAGGTTTTTATTACAAAAGAAATTAAAA TGAAGGTTGAGGGTCGTACTTTGCTGTGTGCACTGTTTGATGTTGTAATACGGATAGCAACTTACCAATCAGTGGCAGTG AGGCTTGATTCCTGTGAAAAAACTGTAAAATTTATTTTGGAAAGATGAGGAAAAATAAAAAAAAACTTGTAAAAAAGTTT TTCCTAGGATAGCATGCAATCTGTTTAATAGCAATTTGCAATATCCAATCATTAAAATTTAATATGCATGGAATGTTTGG TTAGTATATATACACAGTATAATGGGCTATTATGAATTAGGTTAAGTTTTTTGATACACTTAATTTGGGTTAAGAAACTT TGATTTGTGCTCCTCATGATATTTTTAGGGATTATATCAGTGTACAACCACACATTTATATTTCCCTACCTCTTCTTTTC TTTTCTTTTCTTTTTCAAATAGCAATATAGAGGATTCCTGTTCAACATGAAATGTGCTTATGATATAATTTTTTTTCTTC TAGGCTGCTCGTGGAGGAGAAAAACTATTATTGAAAGGGCTTTATTCTGGATTGGCAGGGAACCTTGTTGGCGTCTTACC GTGAGAACCTTGTTGATAGCATGATTTTCCAAATATTATAATTTTGTATGTTCATTAGAAACTTTGAAAACCTATCTTAG AAAGAACAAAGAAGTAAGGAAGTTTTTGGCATAGTTAGGGTGTATAAATTTATTTCCATTGACGATGATTTATGGAATTT GTGCTAAATGGTCTAACTCAAGACACTGACAAACCAACCACATATGCCATTTATTGGTTGAAATAGTGGAGTTAGGCTAC CTGGAAATAATGTAGGTAATATTGATGTACATAAAATTGATGTAGAAAAACAAGAAACTAAAAGTTTCATCTGGAGATTT GTTGATACTCCTAAGCCATTACTTAACTCTATGTTAATATGTTGTTCCTCCAAAGTAGATTATTCTTCACTTTTGGATTG TTGGTATGTCATGTGTTGAAGTGCAAGACTCCTAAGCCATTCACCGTTATGCTTATTCAAAGCCAAAGAGAGTTATTTCT TTTACAAATTTAGAAGTCATTTTCACATACTAATTTTTTATGCTTATCAAGATATGAATTCATGAATCATTTGTAGGCTT TTTCTTTAACACCTTTCGTTGCTTTTACATGCGCAGGGCGTCTGCTCTATTTGTTGGAGTTTATGAACCCATGAAACAGA AATTGCTGAGGATATTTCCTGAAAATCTGAGTGCTTTTGCTCATTTAGTAAGATACTGCTTATATAAACATTGATCTGAA GATATTGGCATACGAAGATTCAAGTAAATTAAAGACCTATTACCAAACTTGAGCATTAGACTCAAAATGTTTTAAGTACT ATTCTATAGGAACTTTAGAAAAGGCGCTACTTTGTATTTCAACTCAATCGTCTCATCACTGTTTCCAATACTTTTTGTCT CTTACTAGAGTTGATGCTTTTCCTGTTATCATTCTTTTGTTTCTGGAAAGTACTTGATATAAAATTCATTCACATCTATT TTCTTTTGGAACAAAAGACATTTACGGGGTTTTAAAATTCCAATAGACCGCAGGTGCCATAGGGGGCATTGCCGCTTCAT TGGTTCGTGTCCCGACTGAGGTTGATATATTCTCTTTTTTTTTTTTTTTTAAATTGATATTTCCTTGATGGAAAACTGTT TCACTGGACACTATATTCTTTAATGCTCCTCAGGTTGTTAAGCAACGAATGCAAACTGGGCAGTTTGCTTCAGCTTCTGG TGCTGTTCGATTTATTGCTGCTAAGGAGGGCTTTAAAGGATTTTATGCCGTATGAAGTCAACTGTCTTCCTTATAAGCTT TATAATAAATACCATTCCCCTTGCTGTGATGATTTGTTAATGACTTTTTGATATTGATCTTCAAAATCACAGGGGTATCG GTCGTTTTTATTGCGGGATTTGCCTTTTGATGCCATTCAGTTTTGCATCTATGAGCAGATTCGATTAGGTTATATGCTTG CGGTAAATTCCTCAAATTGCTGCTAAGAATTATTCCTCTCTAAGATCTTTCGGGCAAACAAAAGTTGCATGCAGAATTCA TGCAGTTGTTTCACTATTAGAACTTTTTCACCTCTGCCATAATTAGTAGCATAGATTCAACTTTATGCTTTAAATTGAAA GAACTCATAGCAATGTAAGATATAATTGTTTGGGGTTGATCGTTGAAACCAATGCTGCTGTTTACTCCTCTTTATCATTC GTGATTGGTGATATGACTTGCATTCCTTTTTGCTAGGCACGAAGAAATCTGAATGATCCAGAAAATGCAGTTATTGGTGC ATTTGCAGGTAAAATAAATGACAATATAGACCTAATTTCACACATGCACACATTTAGAAATATATGGATAAACATATATA TTTAGTTTCAAACTAGATAGCTACTAGCTTATGCTTTAACTGTGCTTCAAGCCGAGAGGCTATTGCGTGGATTTAAAACC CATTTTTTATCCTCACATTATGGATCAATCTTTCAAGGTGTGTGGATGTTTGACACTAATAGCATTTAACATGTAGAATT ATTTAGTACCATGAATCTTCTTCTTTCCTCGTTAATTTTGTCAAACTAGATTTCTTTGCAAGTTGACCCAGTCAAACTAG ATGCCTGTCAATGAAAGTAAATGATCTGCTATCTCTAATTTATATATATTCATAAAACTCTTGGATTTGTTACACATTGG AGAAATCAGGTTGTAGCAACAAAATAAATGGAATTTAGTTTGGTCATAATTTTATATGATGCATATGCATGATGAGTTGA CAAAACTTGAACCCTGAAATTTCAGACATGGGAGCTTGAAACCTAACCTAACATATAGTTATAGAAAAACAGGTGTTGCT TGTAAATTCCATTTCTATTTATAATTTTTAGAGGGTATGGTGAAATGGGTTTATGGGGGCAACCCAAAGAGGATATGAAG CAAATGATAAATTGCTATATTTTGATTTTGTGTTGATTTGTCTAGCATTATGGTAAGTCCAACTACCCTTGTGTTAAGAT GTGATTAAACCACCATGTTTCTTGTAGGTGCACTAACTGGAGCTATAACTACCCCCCTTGATGTCATCAAGACAAGGTTA ATGGTTCAGGTAGGATATAATCTTGGTTATATATATAGGGGAGGCATATCGGATGAGAGGAGTGTTTATTATGAGAGATA AGGTCATTAAATCGTGACTGTACAACCATACATGAGGTTGATTACAAGTGGTTTAATGGTCATATGTCTTTTTAAAAACT CACATCATTTTATGTTTTAATCTTGACCATTCATGGTTAGATCTGATGGTCAAGATTCACTTCTCTCATCTCTCACGATC ACAAGTCATCTCATCTGATACGTCCGCTATATATAGATGCACATGCACCCCTGTCTGCTATATATATACGCCTGTGTGTG CATGTCCTGTTTTTTACTGCATAACCATCCACCTCCACATACTTGTTTCATATGATACCCTTTATGAATGTGTAATATGC AAACAAATCATTAAGAATTTTCAGTTTCAAGCCACTGACAGTTTCTATTTTCCTCAAGGGATCTGCAAACCAGTATAAGG GAATCGTTGATTGTGTTCAAACCATTATGAAGGAAGAGGGACCTCGTGCCTTTCTGAAGGTATGAATTTTCTGCTTTTCT TCCACATATTGTCGCTTGAGTAGAAAAGTGGCATGATCCAAATCCTCCCCAAAGCATGTTCTCTATCTCCTACTTCCCTG TGCAGATTCAGAAAGGAAATCTATTTTGGTGATTTTATATATCTATACATTTGGGTCCATGGTGCTTATAAACTGATCTT ACTTTCATTGCAGGGCATTGGGCCAAGGGTACTATGGATAGGCATAGGTGGTTCAATATTCTTTGGTGTCCTTGAGAGTT CAAAACGTTTTCTTGTGGAGAGGCGTCCTACACTAGCTCAGCACTCAAAGTCAGAAAGAAACAAAGATTAA
CDS sequence (LotjaGi4g1v0404500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGTTTTGCAGATGCTTGTACTAAGAGAAAACAGAACATGCTTCTGAGAAATTCTTTTGCATCAGTTACCATTGG AGAGGAGAAGCCCTTTGACTTCTTACGCACTTTATTTGAGGGTGTTATTGCTGGAGGTACAGCTGGAGTTGTTGTTGAAA CAGCTTTATACCCAATTGACACTATAAAAACACGTCTACAGGCTGCTCGTGGAGGAGAAAAACTATTATTGAAAGGGCTT TATTCTGGATTGGCAGGGAACCTTGTTGGCGTCTTACCGGCGTCTGCTCTATTTGTTGGAGTTTATGAACCCATGAAACA GAAATTGCTGAGGATATTTCCTGAAAATCTGAGTGCTTTTGCTCATTTAACCGCAGGTGCCATAGGGGGCATTGCCGCTT CATTGGTTCGTGTCCCGACTGAGGTTGTTAAGCAACGAATGCAAACTGGGCAGTTTGCTTCAGCTTCTGGTGCTGTTCGA TTTATTGCTGCTAAGGAGGGCTTTAAAGGATTTTATGCCGGGTATCGGTCGTTTTTATTGCGGGATTTGCCTTTTGATGC CATTCAGTTTTGCATCTATGAGCAGATTCGATTAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCAGAAAATG CAGTTATTGGTGCATTTGCAGGTGCACTAACTGGAGCTATAACTACCCCCCTTGATGTCATCAAGACAAGGTTAATGGTT CAGGGATCTGCAAACCAGTATAAGGGAATCGTTGATTGTGTTCAAACCATTATGAAGGAAGAGGGACCTCGTGCCTTTCT GAAGGGCATTGGGCCAAGGGTACTATGGATAGGCATAGGTGGTTCAATATTCTTTGGTGTCCTTGAGAGTTCAAAACGTT TTCTTGTGGAGAGGCGTCCTACACTAGCTCAGCACTCAAAGTCAGAAAGAAACAAAGATTAA
Protein sequence (LotjaGi4g1v0404500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGFADACTKRKQNMLLRNSFASVTIGEEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLLLKGL YSGLAGNLVGVLPASALFVGVYEPMKQKLLRIFPENLSAFAHLTAGAIGGIAASLVRVPTEVVKQRMQTGQFASASGAVR FIAAKEGFKGFYAGYRSFLLRDLPFDAIQFCIYEQIRLGYMLAARRNLNDPENAVIGAFAGALTGAITTPLDVIKTRLMV QGSANQYKGIVDCVQTIMKEEGPRAFLKGIGPRVLWIGIGGSIFFGVLESSKRFLVERRPTLAQHSKSERNKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | - | – | |
| PANTHER | 18 | 301 | 284 | 1.8E-165 | – | |
| PANTHER | 18 | 301 | 284 | 1.8E-165 | – | |
| ProSiteProfiles | 36 | 108 | 73 | 12.923 | ||
| TMHMM | 37 | 59 | 23 | - | – | |
| Pfam | 38 | 72 | 35 | 3.4E-7 | ||
| Phobius | 38 | 59 | 22 | - | – | |
| SUPERFAMILY | 39 | 289 | 251 | 1.24E-66 | ||
| Gene3D | 39 | 311 | 273 | 4.9E-68 | ||
| PRINTS | 41 | 54 | 14 | 4.9E-9 | ||
| PRINTS | 54 | 68 | 15 | 4.9E-9 | ||
| Phobius | 60 | 79 | 20 | - | – | |
| TMHMM | 80 | 102 | 23 | - | – | |
| Phobius | 80 | 99 | 20 | - | – | |
| Phobius | 100 | 118 | 19 | - | – | |
| Pfam | 117 | 198 | 82 | 2.2E-15 | ||
| TMHMM | 117 | 139 | 23 | - | – | |
| ProSiteProfiles | 117 | 199 | 83 | 21.119 | ||
| Phobius | 119 | 138 | 20 | - | – | |
| Phobius | 139 | 313 | 175 | - | – | |
| PRINTS | 172 | 190 | 19 | 4.9E-9 | ||
| ProSiteProfiles | 208 | 294 | 87 | 25.624 | ||
| Pfam | 212 | 297 | 86 | 3.5E-24 | ||
| TMHMM | 215 | 234 | 20 | - | – | |
| PRINTS | 217 | 239 | 23 | 4.9E-9 | ||
| TMHMM | 269 | 288 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0404500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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