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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0425100 |
| Transcript ID | LotjaGi4g1v0425100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione S-transferase family protein; TAIR: AT5G41210.1 glutathione S-transferase THETA 1; Swiss-Prot: sp|Q9ZRT5|GSTT1_ARATH Glutathione S-transferase T1; TrEMBL-Plants: tr|I1K6J9|I1K6J9_SOYBN Theta class glutathione S-transferase; Found in the gene: LotjaGi4g1v0425100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80000386..80002352) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGGAGAAGGTGAAGGTGTATGCAGATCGTATGTCCCAGCCAGCTCGAGCAGTTCTCATATTCTGCAGGTGATTAAC TAATTCTTCAAATTTGACTTCACACACAAACAAACCCATGATTCATTATATGATATTGAGTCAAATTTTTATCATCTGCT GTTTTATTGAATCCGGGTTTTGACATGAAAAGGGTTAACGGAATTGACTTCGAGGAGATTAAGGTTGACCTTTCCAAACG TCAGCATCTGTCTCCTGAGTTCAGAGGTAGAATAAAAAAACAAGCATCTGCATGTTATAATTTGTATGCACTTGCCATGT GTTTAATTCTGCTTTTGACATTGTTTCTTGATGATTTCAGAAGTAAATCCTCTGCAGAAAGTTCCAGCTATTGCTCATGG AACCTTAAATCTCTCCGAGAGGTAACCATTGACTTAAGGGCCGTGTCCTTTAACCTTCAATTTCAGTTCTATATAGTACA ATTTGTGGAATTCACTTTATAAATTTGTGGTTGATTAAATGAAATGGATCTTTCTTTCCAATGCCTTTGTAAGTGATATA CAGTGATTCCATCATGTATGTGTTTTTATTACATCTTCTTTGTCGCCTATACTTTTCTAATCTCTTCAAATTCTGCTATT TGTAAATTTTGAAATTCCATATCAAAAATATGTTTACTTGTTGGTTTCATTGTATGTTCTTCATTAATCTTGTTTTGATT TGACAGCCATGCGATCCTCGTCTATCTTGCTTCTGCTTTTCCTGGAATTGCTGATCATTGGTTAGTAGAACCACTTCTTT TGCTTCTGGAATTCTGAACTGGTAAAGGGTTTTCAAGATATCCTCATAAATATCAGAACAGGACTTTTTCATTTTGTACT AGTTTAACATGAGTAAAGCAAAGGGCTTAAGCTAACCATGACCTTGGTTCCTTGTGCATTTCCAGTACCCTTTTGACTCG CTTTCAGATTTTTATTTGAAATTAAATATTAGGATGAATTAGAATAGAGTAAATAACTTAAGAAATACAATGATTCTAAA TCCAATTTATGCTGCAGAGATATACAATTTTCACAATCTAAATTAAACCCTAGTTGTCACTTGTCATGCCTTGCAGATTG AAGTGTTGTCATGTACGACTGAAATTTTCTTGTGCCGAGTTGTTCTATATAACACCTTTCCTTCTTGATGTATCAGGTAT CCAACCGATGTTTCCAGGAGAGCCAAAATTAACTCGGTATTGGATTGGCAGCACTCTAATTTACGACACGGAGCAGGTGC TTTACACATCTAAATCCGGTCATCCTTAAAACTCCTTGAAGCTATATTGTAATTTTCTGTGAGCACTTGAGCTTCTACAT TAGAAACTTGTGTGCTAGTTAGGCATTGTAACGTACAACCAAAAAGAAAATTCAATCATATTCAAATGTTTATTACCTTT TGCAGTGAACTATGTGGTAAATACTGTACTAGGACCTGCACTTGGCCGTCCACTGAATCCAAAAGCAGCTGCTGAAGCAG AGAAAGTTTTATCATCTTCTTTATCGAAACTAGAGCATATTTGGCTAAATGGAGATGGACCTTTTCTGCTTGGTGGCTTT CAACCCTCTATAGCAGATCTCAGCCTGGTTTGTGAACTCATGCAACTTGAGGTAACTCAATATGACTTAATAATTGTGTA ACTATTGTGATTTATGATGGATTGCTTTTTACATAAATTTATGAAGTTTCTAATTAAACTGCCAATAAACTTAGGTTTTG GATGAGAAGGATCGCAATCGTATATTATCCCCATACAAGAAAGTTCTGCGGTGGATTGAGGATACAAGAACTGCAACAAA TCCACACTTCGAAGAAATGCATAATGTCCTTTACAGAGCTAAAAAGAAATTCCAACAGGAGCGTTCAAGGGTAGCTAAAA CTGGGACTGAGCCTAGCAACAAGTTAGGGGGGCATTCAAAAATGTGA
CDS sequence (LotjaGi4g1v0425100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGAGAAGGTGAAGGTGTATGCAGATCGTATGTCCCAGCCAGCTCGAGCAGTTCTCATATTCTGCAGGGTTAACGG AATTGACTTCGAGGAGATTAAGGTTGACCTTTCCAAACGTCAGCATCTGTCTCCTGAGTTCAGAGAAGTAAATCCTCTGC AGAAAGTTCCAGCTATTGCTCATGGAACCTTAAATCTCTCCGAGAGCCATGCGATCCTCGTCTATCTTGCTTCTGCTTTT CCTGGAATTGCTGATCATTGGTATCCAACCGATGTTTCCAGGAGAGCCAAAATTAACTCGGTATTGGATTGGCAGCACTC TAATTTACGACACGGAGCAGTGAACTATGTGGTAAATACTGTACTAGGACCTGCACTTGGCCGTCCACTGAATCCAAAAG CAGCTGCTGAAGCAGAGAAAGTTTTATCATCTTCTTTATCGAAACTAGAGCATATTTGGCTAAATGGAGATGGACCTTTT CTGCTTGGTGGCTTTCAACCCTCTATAGCAGATCTCAGCCTGGTTTGTGAACTCATGCAACTTGAGGTTTTGGATGAGAA GGATCGCAATCGTATATTATCCCCATACAAGAAAGTTCTGCGGTGGATTGAGGATACAAGAACTGCAACAAATCCACACT TCGAAGAAATGCATAATGTCCTTTACAGAGCTAAAAAGAAATTCCAACAGGAGCGTTCAAGGGTAGCTAAAACTGGGACT GAGCCTAGCAACAAGTTAGGGGGGCATTCAAAAATGTGA
Protein sequence (LotjaGi4g1v0425100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMEKVKVYADRMSQPARAVLIFCRVNGIDFEEIKVDLSKRQHLSPEFREVNPLQKVPAIAHGTLNLSESHAILVYLASAF PGIADHWYPTDVSRRAKINSVLDWQHSNLRHGAVNYVVNTVLGPALGRPLNPKAAAEAEKVLSSSLSKLEHIWLNGDGPF LLGGFQPSIADLSLVCELMQLEVLDEKDRNRILSPYKKVLRWIEDTRTATNPHFEEMHNVLYRAKKKFQQERSRVAKTGT EPSNKLGGHSKM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 82 | 82 | 4.5E-23 | ||
| PANTHER | 2 | 252 | 251 | 1.3E-159 | ||
| SUPERFAMILY | 2 | 89 | 88 | 3.32E-21 | ||
| PANTHER | 2 | 252 | 251 | 1.3E-159 | – | |
| ProSiteProfiles | 3 | 84 | 82 | 19.935 | ||
| SFLD | 4 | 232 | 229 | 0.0 | – | |
| SFLD | 4 | 232 | 229 | 0.0 | – | |
| Pfam | 4 | 77 | 74 | 1.4E-12 | ||
| CDD | 5 | 80 | 76 | 1.26949E-36 | ||
| Gene3D | 84 | 241 | 158 | 1.0E-45 | – | |
| SUPERFAMILY | 85 | 216 | 132 | 1.53E-20 | ||
| ProSiteProfiles | 91 | 228 | 138 | 13.275 | ||
| CDD | 94 | 223 | 130 | 3.02516E-42 | ||
| Pfam | 134 | 204 | 71 | 8.5E-6 | – | |
| MobiDBLite | 231 | 252 | 22 | - | – | |
| MobiDBLite | 235 | 252 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0425100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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