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LotjaGi4g1v0460300.2

Overview

Field Value
Gene ID LotjaGi4g1v0460300
Transcript ID LotjaGi4g1v0460300.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TAIR: AT1G73740.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|B3QWT7|MURG_CHLT3 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TrEMBL-Plants: tr|K7KRG7|K7KRG7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0460300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:83105087..83109443) extracted from Lotus japonicus Gifu genome v1.2.

TTTTAAACGATATGTATAACTAAGTGCTTGTTTGTTGACTAATGACTAGTTGGTTCCAATCATCTAAGCAAAAATTTCAC TAAGAGAAGGTGAATGTTCCGACTCAAACAATATTACCTTTTATGGATTATTTATGTATTGTGAACATGTTAAAAATTGG TCAACTCATGAATATGTTTTTACAACTGACATTTATGTCTTTTTGCAATATGGTCCATATGCTCTAAAACTTGGTAAACC ATGTTTTTCTTAGTACACAACAGACACATGTAGACTTGTATCAGAAAAATAAAACAAAAGAGCTTATTTGTTGATTTGTT GAAGACAGAACAGAGAATGATGTCCTCTTCCACTTCCAAGATGCATCATCTTGATCTTCAGCTTCAAACTACCTTAATGG CTACTACCACTTTTTCCCACCTCACCCAGGCAAGTCTCTGTTTCTTTCCCCCTTACAATTTTGTCCCCTCTCTTCTGAAC TCTCTTTTGCACTATAACAGAAGGAGCCTTCAACTCTCATGCAGCAGCTTGTCTTCTAACGACAATGACCACAACCTCCG AGTAGTCTTTGCGGGCGGCGGTACTGGCAGCAATGTGTACCCCGCGGTGGCCATCGCGGAAGAGCTCAAAACATCAAACC CCGCGTGCGAGTTTCTCTTTGTTGGCAGCCCCAACAGCATTGAGAGCACTGCAGTCACCTCTGCAGGGTACAACTTTGCC CCTGTTCTCTCACTCTGTTTCTCCCCTGTTTCATCCATCACTCTGTTTCAACTCTGTTCTTCCCCTTGCCGTTTTGTAAA ATCCCTGATCCAATGCTCACGCCACCTCCGAGATTTCAAACCTCACATTGTTGTTGGAACCGGTGGCTATGTCTCTTTCC CCGTTTGCCTCGCCGCGAAAATCAACAACATCATGGTTGTGATTCATGAACCAAACTCTGCCCCTGGTTTCGTAAACTCT GTTCTTGCCCTGTTTGCTCATAAAATCTTTGTTGCTTTCAACTCAACCGTTGATAGCTTCCCCAGAAACAAGTGCGTGGT GTGTGGAAACCCGGTGAGGTTGTCTCTCAGAAACCCGGTTTCGAAGGCGGCTGCAAGGTCTCATTTTTTCCCTGGTTATG GGGAATCGAGTGATTCCGAGAAGGACAAGGTTTTGTTAGTTCTTGGTGGTTCTTTAGGTGCTAATGCTGTAAACATAGCT ATGCTGAATTTGTATCATCAGATGCTGAGACAGAACAATGGCTTGTACCTTATATGGCAAACTGGGGTTGAAACGTATGA TGAAATGGACAGCCTAGTTAAAAATCATCCACGCTTGTACTTGACACCGTAAGTGCTTCTTGTTCCATCCTACATTGTTT GAATGTTTTCTAGCATTTTTTGTTCTACTGAGAATTGTTCTAGAATCACTTTTGTCTAGAAGCTACAAGTCTTAACTTCA TAGTAAGCATGTGTTGGATTCTTCATATTTTAAGATATCTTAGTTTGTTGTTAGTTCTTCAATGGAATATATTCACCTTT TGAGAAAGTAAATGAAGTGTGGTGATTCATCTAAAACTAGTATGTTTGTTAGCAAGTGGAACTGTGTGGAGATGCTTTTG AACTTTCTATTCATCAAAGAACTATATTCATATATCGTGAAAGATTGTGTTGAGATTTTGGAGTAAAAAAACTCATTTGG ATACCAGTTGAGTTAACCTGAAACCACATTCATCTCAATCCATAAGATGAGTTATGTTCACTTTTAGTCTCCAACTAAGC GCTAACGCATGTTATCATTCAATCCTCAAATTAGGTTAAATATCTGAATAATACATCATGGTCCTCGTTGTTCTTTGACT TGATTTCTAGTCTTATAATGTTGAATTCGATATTGTTTAGTTTAAATATTTATTGACAGAACTGTTTTCAATAATTTGAT TTTAGATAGAGCCCAATAGCATTATTTGATCAAGTAAGCGACCCCAATTCAGTATAAAAAGGCTCTAGGAGTATCTAATT GTCCTTTCATTTTGGTGAATAGTCACTTCTGAGTTTGATAATGATGCATATTGATGAGCTCAAATATTCGATGTTATTCA ACCCATAAACCAAAAAACTATGATTAATGATAAATTCACACCAACTTTCTGATTTCTCTTTCATTTCATTTACACTAACT TTTGCTACATATGTTTATCTGCATTTTCTATCACATTATATTGGAATTGAATCAGAGAAATGAAGATGAAAGGCAAAAGT CTCTCATTGATTAAAAAGAAAGAATTGAGTTCATACGATGTATCTGGAATGGTGCTTCCCATTATCTGTAATAACTGTCA TCAGTTATAACTCACTACTTACCTAAAGGAAACTAACAGAAGTTACAGAACTAACTTTTACAAAACATAATATCTATTCT AATATTCCAATACATCACCTATCATATTACTCATCTATCTCTCTTCTCTTCTTATCTCGCTCTTGTGTGAGTGGAATTAA AGTGCGAACGAATTATTATTCTTAAACTATTTAGAAAACGGATGCTTTATCTAGGAACTTTTTTCTGTTAACCAATTTTG AGCTATAAACTGTTATTTCCATCCACATATTACTATGTACTCCCTAAATTCACTAAAAGTTAGTTGCAGTTTTGTAGCAC ACTCTTCAGCAATGAACATATTGTGTATATAAGTCATTTCTGAAGCTCTTGTAATCCTTTTGAATTTCATTGACATATCT CCTTGTTATGAAGGTTCATGCACTGTATGGATTTGGCATATGCTGCTGCAGACTTGATTGTATCTAGAGCGGGTGCAATG ACTTGCTATGAAATATTGGCAACTGGGAAACCTTCTATCCTGGTAGTAACATATTGTGTTTAGATGTTCACTGCATTCCT TCTGTTTTTCTTTTATGTTTAGAACTATAGAAACATATTATTAGGCAAAAAGTAAATGTAATAATTCAGCTAATTAAGTG GAATAGCCGCCATAAAAGTACATGAAATAAGTTTCTTAAAATACAGCAAAGACAGATAATTTATGTACTGTGTTAATAAC TCAGTCAACTATAGTTTATGGATAGATTTACAAATTATTATCTGCATCCAAAGAGTGTTGTGTATCAGTAATAATACTTA GACATCCAGACAGTTAGACACTTCACAGATACTCCAATTTTCTCTGTATCTCTCTCTTCTTATCATATCAAAATGATCAA TATAATATATCACATTCATTACTTCTCTCTCTTCTCTTCATTTCTAAATTGCTTTTTCAATTATTATTTGCAGATACCAT CGCCACATTTATCTGAGGGAAATCAATTCAGAAATGCTTCCTTGCTGGCAGACTTAGCTGGTGTGACAGTGATAACTGAG GAGGATCTCGACTCATGCACACTAGCCATTGCAATTGAAGGGATTTTCAGTATGTTTGTCTTCATCTTCATTGTCTGTTA AAAGATTCAGGTTTTGGAACTGTAAATACCAAATGAATGTCATGTATCATGAAGAAGCAACATGTATTTCTTATTTCATA TCTTTTCCATTCCTTCTTTCATGATATGGACTTTTGAAATGCATGGTAGGGGACAAGAAGAAGATGGAAGAAATGTCTGA GAGGGCTCTCAAAGCGGCGAACCCCAAAGCTTCAGCTGAGATTGCAAAACACATATTTTCTCTTGTTAGACAATCAATAA AAAGTGGAGAAATTGCTAAAGAGTAGGGATGTTAGCTTGGCGATTCAAATAAGTTCCTGCTTGCTACAGATCTCAATTGT AAGTTTTTATTCTTAGCCAACAACACCATTAGACACGAAGATCTCTTATGCTCTTGGAAGATAGCAGGATAAGAGGGTGA TGATAAATAACATTTTTGCTTTCTTGATGACAATGTTTAGAACTAAAGAAATGTGTTTTGTTGAAAAAGTTAAATGCATG TTTGAAAATCTTTCTACTGATTGATTCTAATGCCAAAATCAATTCTGAAGAGAAGCTTTTGTGGGTAGCTTATGGATTCC AAATTTGATTGAGGAAAGAAAAGTTGATCCAAACATGTTATAAGTCAGTCCCATGATTTTGAATGTAACATGCAGTTCTC TCACATAAAAACTGAGAGACAAAACATTAGTCATATATAACATATGTGGCGCACCTCTAGTTTTGTGATTCTCTATTTTT TTCATTTGAAAGTTGATTTTGTGATATTAGACCCAGTGAGACATTATTTCTAATTTTCCATGTTCATATATTTTCTTGAC TTATTCAAAGGTTTTGTCAGGAACAGGGAGATGATGATCGAGTTGAAGAATACAACTAGTCCATTGATTTGATAGGATAA TGCAATATCCCATTAAGACAATTTTGGTGTAAAGCTG 

CDS sequence (LotjaGi4g1v0460300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGTCCTCTTCCACTTCCAAGATGCATCATCTTGATCTTCAGCTTCAAACTACCTTAATGGCTACTACCACTTTTTC CCACCTCACCCAGGCAAGTCTCTGTTTCTTTCCCCCTTACAATTTTGTCCCCTCTCTTCTGAACTCTCTTTTGCACTATA ACAGAAGGAGCCTTCAACTCTCATGCAGCAGCTTGTCTTCTAACGACAATGACCACAACCTCCGAGTAGTCTTTGCGGGC GGCGGTACTGGCAGCAATGTGTACCCCGCGGTGGCCATCGCGGAAGAGCTCAAAACATCAAACCCCGCGTGCGAGTTTCT CTTTGTTGGCAGCCCCAACAGCATTGAGAGCACTGCAGTCACCTCTGCAGGGTACAACTTTGCCCCTGTTCTCTCACTCT GTTTCTCCCCTGTTTCATCCATCACTCTGTTTCAACTCTGTTCTTCCCCTTGCCGTTTTGTAAAATCCCTGATCCAATGC TCACGCCACCTCCGAGATTTCAAACCTCACATTGTTGTTGGAACCGGTGGCTATGTCTCTTTCCCCGTTTGCCTCGCCGC GAAAATCAACAACATCATGGTTGTGATTCATGAACCAAACTCTGCCCCTGGTTTCGTAAACTCTGTTCTTGCCCTGTTTG CTCATAAAATCTTTGTTGCTTTCAACTCAACCGTTGATAGCTTCCCCAGAAACAAGTGCGTGGTGTGTGGAAACCCGGTG AGGTTGTCTCTCAGAAACCCGGTTTCGAAGGCGGCTGCAAGGTCTCATTTTTTCCCTGGTTATGGGGAATCGAGTGATTC CGAGAAGGACAAGGTTTTGTTAGTTCTTGGTGGTTCTTTAGGTGCTAATGCTGTAAACATAGCTATGCTGAATTTGTATC ATCAGATGCTGAGACAGAACAATGGCTTGTACCTTATATGGCAAACTGGGGTTGAAACGTATGATGAAATGGACAGCCTA GTTAAAAATCATCCACGCTTGTACTTGACACCGTTCATGCACTGTATGGATTTGGCATATGCTGCTGCAGACTTGATTGT ATCTAGAGCGGGTGCAATGACTTGCTATGAAATATTGGCAACTGGGAAACCTTCTATCCTGATACCATCGCCACATTTAT CTGAGGGAAATCAATTCAGAAATGCTTCCTTGCTGGCAGACTTAGCTGGTGTGACAGTGATAACTGAGGAGGATCTCGAC TCATGCACACTAGCCATTGCAATTGAAGGGATTTTCAGGGACAAGAAGAAGATGGAAGAAATGTCTGAGAGGGCTCTCAA AGCGGCGAACCCCAAAGCTTCAGCTGAGATTGCAAAACACATATTTTCTCTTGTTAGACAATCAATAAAAAGTGGAGAAA TTGCTAAAGAGTAG 

Protein sequence (LotjaGi4g1v0460300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMSSSTSKMHHLDLQLQTTLMATTTFSHLTQASLCFFPPYNFVPSLLNSLLHYNRRSLQLSCSSLSSNDNDHNLRVVFAG GGTGSNVYPAVAIAEELKTSNPACEFLFVGSPNSIESTAVTSAGYNFAPVLSLCFSPVSSITLFQLCSSPCRFVKSLIQC SRHLRDFKPHIVVGTGGYVSFPVCLAAKINNIMVVIHEPNSAPGFVNSVLALFAHKIFVAFNSTVDSFPRNKCVVCGNPV RLSLRNPVSKAAARSHFFPGYGESSDSEKDKVLLVLGGSLGANAVNIAMLNLYHQMLRQNNGLYLIWQTGVETYDEMDSL VKNHPRLYLTPFMHCMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPHLSEGNQFRNASLLADLAGVTVITEEDLD SCTLAIAIEGIFRDKKKMEEMSERALKAANPKASAEIAKHIFSLVRQSIKSGEIAKE 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 13 13 -
Phobius 1 32 32 -
Phobius 14 24 11 -
Phobius 25 32 8 -
Phobius 33 457 425 -
PANTHER 55 448 394 5.2E-186
PANTHER 55 448 394 5.2E-186
CDD 75 440 366 8.63178E-118
SUPERFAMILY 75 446 372 7.63E-84
Pfam 76 218 143 1.0E-28
Hamap 76 445 370 28.067
Gene3D 77 435 359 5.9E-96
Gene3D 240 429 190 5.9E-96
Pfam 272 432 161 7.0E-31

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Molecular function Transferase activity, transferring hexosyl groups Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor).
Biological process Lipid glycosylation Covalent attachment of a glycosyl residue to a lipid molecule.
Molecular function Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity Catalysis of the reaction: Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol + UDP-N-acetyl-D-glucosamine = GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol + UDP.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0460300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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