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LotjaGi5g1v0025600.1

Overview

Field Value
Gene ID LotjaGi5g1v0025600
Transcript ID LotjaGi5g1v0025600.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Alpha/beta-Hydrolases superfamily protein; TAIR: AT4G34310.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q2TBM9|SRAC1_BOVIN Protein SERAC1; TrEMBL-Plants: tr|I1M8K1|I1M8K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0025600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:4363530..4370252) extracted from Lotus japonicus Gifu genome v1.2.

ATCAAATTAGTCTTTTCTTTCCTTTATTTCTTATCTTCTTTACCGTTGCTCTCCTAGGGCACAGTGTTGGTAGTGAGCAT CCTACCAATTCCTTGATCCTTTATATAGCAAAAAGGAGACACATTAGTGTCCTAGCACCCATGTTACCATGTACAAATCC GAGATATCCTCCCGCCATCCTCGCCTACAAACATCACCTCCTTCACCGCAGAACAAGAGACTCAACTCAAGAAAGCAACA AACAATCCACTTCTCATTCTCTTTTCTTCTCTTCCCTCCCAAGTCCCAATCTCAAAATCAAAACCATAATTTATTATTAT ATAAACAAACAAACCACATTACAAATATCATCAAAATCTAACTCGCAATGCTTCGAATCTGTTTGAGAACAACTCGCCCC TTTCTTCGCTTCCCTCGTCCCCGCTACATCTCCAGAAAATCCTTCAATTCACCATCCAAAGACTTACAAAATTCCCAAAT TGCCCCTCCAACCGTCCCTAACAACCTCTCTCCCACTCCTTCCTCGCCTCTCTCTCGCACCTCCTTCATCGCTCTCTCCG CCGTCGCTGTTTCCGCACTCTTCGCCTCCGCCGCGATTCTCTCCTCCGATTCCAACTCCGATCACGACGGCGCGCCGAAT CCTCTCTATGCCGGCGCCGAGCACGCCGTGCACCGCTCCGTCGACTCCTTCAACAAGCTTTTCCACCACGTCAAGCGCAC CGGCGTCGCTGCTTCTGTCCTATGGCAGTCGCTCCGCTCGGTGCTGTCCTCCGCCAACCACGAGGTCCGTTCCGGCTTCG AGATTCGTGTCGCGGCACTGCTGGCAGATATCGCCGCCGCGAGCTCCAGCCGCAGGGCGGCGATTGTTGGCGCTGGAGGC GGCGCCGTAGTTGACTGGCTGCTCGAGTCTGTTGCGGTGGCCAAGGACGGCGGTATCGGTACTCAGGCGGAGGCCGCGAG GGCGCTGGCGTATTTGATTGCGGACCCGAACGTTTCTGCTGCTGTGCTTGCTCGACCTCATGCTATTCCGAATCTTCTGA GGTTCATTTTCTCTTGCCAGCCTCGGCGTTCCAAGAATAAGAAGGTAACTGATTCTATATCCAAGCTTTCTGTGTGAATC GTAATGCTATTGTTGTTTCTACTTATCTTGAATGAGACCTAGTTTAGCATTGTAGATTTTGCTTCTTTCCTTTAATAACA ATGCATTCATAATCTGATCATTGTTTATATAATATACTATATATATGCGGCGCGCATTAGATGAGATCATGTTTTCTTGA CCTTACTGTAGAAATGGATGTAACCATTCTAGTATAGTTGTTTGGTCGGTGTTAATTATGTATGCGTATGTGTATATTTG TGTAAATGCAAGCTTCACTCAAGAAGTTGGTAGTGTCCTTTTTCTGATTTTGACATTTGTGATATCATGCAATCTTTTTT GGCAGCAGCATTCAAGACGCAGTATATTTGATGTTTCTGATTCTTTGAAAGGCAGGAGCATGCTCGTGGCTGCCATCATG GACATTGTTACGTCCAGCTGTGACAATGCAGAAAAGGTGTCATTTAGGCCATCGTTGCCTGGAAATGCTGAAACCAGAGA CATTGCTGCAGCCCTACAGGTTATTGAGGAAGGGGGTTTGCACTTGGATGAGCCACCAGAAGGTGAAGATGACGATGATG ATGGTGGGACAGGAAGGAAAGGGATTGGAATCAAGATACTTGGAGGTACCACTGTTTTAGGGCTTTCGAGGACCAGCAGC GTGATGAAGTTGGATAATAACTCTAATTCCAGTCATGAAGAATCATTGAAGCATCATACTCCAAAACCCCTTGTGTATCA AAGTGATAAGTATGACAATTCACAGGCACAACACAATATGTCTTCTGCTGTTGTTCCTGGTCTATGGGATGATTTGCATT GTGAACATGTTGCTGTTCCTTTTGCCACTTGGGCATTGGCAAATTGGGCAACGGCATCACAGTTGAATAGATCTCGCATA CAGGAACTGGATCAAGATGGAAATGCTATCTTGTCTGCTTTAATGGCACCTGAGAGATCTGTTAAATGGCATGCAAGTTT GGTGGTGCGGTTGCTATTAGAAGATCGCAATACACCTTTGAATGAATCTGTTTCTGATTGGAGTTCCAGTCTCCTTTCTA CTATTTCTCAGGCATGTAAGCATGAAGATGTTTCATTAGCTCAGGTAGCTTTTTCTGCCTTTCTGTTATCTGTTGAGAGG AGTCCGGGCGTGCAGAAGATAGTGATGGAGAAGGGTCTTAATTTGATGAGAGATATTGCTAAACAGACAACAAAGCATAA GCAGGTCCAAGAAGCAATGGCAAAGGCATTAGAACTACTTTGTACTGGGGACCTGCATTTATCTCTTGAAGAGAGTCAAA AATGGTCAGGCATTCTTCTTCCCTGGGTTTTTGGAACATTTTCTTCAGATACTATACGAAGTTCAGCCATAAGGATTCTT TCTCAGATCTTAGAAGACTATGGAGCATCATGTATACCACTTTCTCAAGGATGGTTAGCCATGCTCTTAACTGAAGTACA AAATTCCATCAAGAAATCAAATGATAAAGGAGCCAGTCAGCCTAACAGTGATAAAGTGAAGGTTTGGAAATATTTTGCTT TCTCTTTCTGTTAAAACTGACATGTCATTGTTAGCTGATTATGCTGCTTCAATTCCTAGTCGACTTTTAATCCTCACTTC TGCTGTGTGTTCACCTTTTCAGACTTCAATCAATAATGCAAATATTGCTTTGGCTGGACAAGTTGCAAATCAGCTATCTA GTGCTGTGGTCAATCTGGCAGCTAAACAATTGAGAATTGCGTCTAATTCTGGGGATACATCCACTCTGGCTGATTTTCTC TCTCTGGAACCTCTAGCAGGACCATTTAAAAATTTAAAAAAAGATAGTCTGCCTAAATTTGGTGCTGCAGATTCTGCCTT GGCAACCCTGAAAGGTATTAAGGCTTTGGCTGAAGTTATTGCTGAAAACTCAGTGTGTCAGGACAAGGTTGTTGATTTTG GCATTTTATGTTTGCTGAGGCGCTTTTTATTGAATGATGATTATGAGAAACTGGCTGCCATTGAGGCTTATGATGCATCA TCCAGAGCACATGAGGGGCAGGAGCGGATGTCAAATAAAGGAGACAAACCTCCTATATCAGATAAAAATGATCCAGCTAG TGTCCGAGTTCCACCCACAGCTCATGTCCGCAGGCATGCAGCTCGGTTATTGACCATCCTCTCCCTGCATCCCAAAGTCA AGAAGGTCGTTATAGCTGATGAAACTTGGTGCAATTGGCTTGATGATTGTGCTAATGGGAAGATTCCAGGTTGCAGTGAC CTTAAAATGCAAAGTTATGCCAGGGCAACACTTTTAAATATATTTTGTGAGGACCAGTTTAATGGAATGTCTGAAACTGG AAGCTCTGGAACTGGAAGCTCTTCTGATGGTGGTGTAAAAAATAACTTGTGTCCTCGTTATGCTGACATGATATTCTTGA TAAATTCTCATCTTCCGCACTGGAAGTGTCCCAAAGAAACAGATCGACGAGGTCCTTTCTCAAAAGACGTATCTGTGTCT ACTTCTGATGTTACTGAGGATGGGATAAAAACCTTAGATGATGGCAACTGCTCTAGTTCAATTGGTTCAACTGAAAGTGG CCTAGATAGAAATTGTCCTCCGCTGGACGTAGTTTTTGTCCATGGCCTCCGTGGAGGACCTTACAAAACTTGGCGTATAT CTGAGGACAAATCCTCAACTGTGTCCACCTTGGTGGAGAAGATTGATGAGGAAGCAGGAAAGCTTGGAACCTTTTGGCCT GGCGAATGGCTTTCCAGTGATTATCCAGATGCTCGCTTGTTTACCCTCAAATACAAGGTTTGCATTTGTAAGATTATGAC TTGCTTTCCTAAGTAAGAAATGACTTTAGCTTATGAGTATTTTTATTGTATTCTTTATTACTGTTAGTTTTAACAGCTTC TTTAAGTTTTCCTTGTATATGATCCCTTTCACATGCATCTAACTCTCAGTGCTTTATACAGTCTAATCTCACACAGTGGT CTGGAGCTAGCCTGCCTCTCCAGGTGAATCTCTTACTGTACCTCTGTATTATCTGATTAAGTGATTGAGAAACAGCAGCT CATTTTACTTCTCTACCATTGGCTTGACTAGTTAGTCACCTAGGAAGTTTCCAAATACTTGACTTTGTGTATTGGAGTTT CATCCTCTATGACTATGAGCCTTGTTAAGGGTTTTTGAAAAATTATCATTTTTAATGCTACAGACCTACAGTCACTGTGG AGCATTACCATAAGCTGACTTGCAGGTTGCAATTTCAGCAGATGCTTTTATTTGCTTGAGACCGAATGCATAATAATACA TGATTGTATATTCAATATTAGGACCATTTTAAAAGCTAAAAGTCTAAAACACATGGATCTATACATTTTATTAAGTACTT TTATGTTTTGAAAATATTTTTGGTCTTCCTTTTAACCTGTGCGTAAATTGTTGAAGTGAGACTGCATTTGGTGGATGTAT GTGAGCAAATATCTTTCTTACTTCATCAGTTCATCCGTTAGTTTCTGCATTATTATTTTCTCTTGTTCATGACTTCATGT ATTTAGCCATTAGAACCTTGGTGAGCTAACTTCTCTAACCTATATCCATCTGTTAGTGTTAGTTATTTACTCACTTATAT ATTTTTCATAGGCAGGTCTTTTTCTCTCTCCCTCAGCTCTCCTCTCAATTGTTGCTTTGTTCTCTAGTTACCATTCTAGT TCATATCATATACATGTTTATTTGAACTTTGCAGGAAGTTAGTTCTATGCTATTGGAGAAGCTTGTTGCTGCAGGAATTG GGAATCGACCTGTTGTTTTTGTAACTCACAGGTTAGTTTGGCTGCTTGAGTGTATTCACATTTTTTTAGACTGCGGTTTT CAAATGTTTTTGTTACCTGGTTATTTGTTTTATAAAATTGCACCTTTCTTCTTTTGTGTCATGTTGTTTTCTGTTGTCTG CAGTATGGGGGGCTTGGTTGTGAAGCAGATTCTTCATACAGCGAAGGAGCGAAATTTTGATAATCTTGTGAATAGTACAA TAGGAATCGTAAGTATAAACTCCTTAAGTATATACTTAAAACATTGCACTTTTGTCTAATGCTTTATTTTGGTTGTAGGT GTTTTATAGTTGTCCTCATTTTGGTAGCAGACTTGCAGATATGCCATGGCGAATGGGCCTTGTGCTTCGTCCTGCTCCAA CAGTTAGTATTTAAAATTACCTTCTTTCGTTTAACTGTGGATGTTGTTAGTGTATTTCTTATTCTAAAAATTTCTACATT TGAAAGATTTTTTATAGTACTTTGTTCTTAATGTTTTATAGATAGGAGAGCTAAGAAGTGGGTCTTCAAGACTGATTGAG CTTAATGATTATATTCGTCAGCTTTATAAGAAAAGTATGCTTGATGTCCTCAGCTTTTGTGAGGTAATAATAAGCAGTTA ATTTTCTGTTATAATCTATATCAATGTCTTTTATGAGTTTGAGTTGTCATTGGCTGTGTTTTGCAGACCACAGTAACTCC AATAGTTGAAGGTTATGGTGGATGGGCTTTGCGAATGGAAATTGTACCTATTGAGTCAGCATATCCTGGATTTGGGGAAC TTGTTGTAAGTTGTTATGAACCAACTATCTTGAAAACTTAAACGGTTGGTTTTAAGACACATGAATGATTCAGTATTATA TTTCCAAGTCCTAACATGCCCCCTCATGAAAAGAGCGTTGGGCCTTGAAGCATGCAAAGGCACATAGATGGTTTTTTTGT TATGTTCCTAAGTAAGTTTTGTGAAATATTTCCCGTGTCAAAGAAAAAATGAAATAAATAATAAAATACTGTTTTGAATA CTAATCATATACTCATCCCTCCCTAAATTCCCATATGCAAAGTGCTTGAGTTCTAAAATCGATTTCTGATGCACATAGTA ACCCTGGTGCATTTAAGAGACAATAACGCTTTAGAGTAGTTTCATTCAATATTGTGAAGTGAGTTTTTTGATGTTGTATT TTAGTGCTGGCTAATATCTTCAATTTTTGAACAGGTATTGGAGTCAACAGATCATATAAGTTCTTGCAAACCAGTGAGCC GCTTAGACCCTTCTTATACAGAGACATTAAAGTTCTTAGAGAAATTAAAAGCGTGTTATACCTGACTGATCCGTTTTTGT GGAGATGTGTAAATACTTTTGAAGAGTTAGGTAGGTGTGATATTAATATGCAAAATGCATGAGCTCATTTATCACGTGGC TTCCATTTGATAACTTGATACCATTCAACAAGTTGAGTGAAGCTTCATGATGACCTGACAGATTTGGTCTTAGTAACTTA TACATTTTTTCATTGTTCGATTCATTTGGTTCAAATTTTGTGATTGATGTTGTAGGTCAGTTGGCTCTTGGGGATTTTAA TCCGTTCGCCTTGTACATAATAGGAAACACAATTATAACCCCTGTATATTCAATTATTCATATAATCAGTCTTCTTTTTT TATGTCAGAATTCTGGAAGCATTTAGGGTTCTGAATTCTCTTTCAGATGTAATTATAATTCGATTTCTTTGCAAAAGAAG GTTGGTGTGATGTTTTGTTTTAAAGTAAGTGTAAAAACAATCCACCTCGTTACAGTAATGGATTCAGAAACTTTATGTTG TAG 

CDS sequence (LotjaGi5g1v0025600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTTCGAATCTGTTTGAGAACAACTCGCCCCTTTCTTCGCTTCCCTCGTCCCCGCTACATCTCCAGAAAATCCTTCAA TTCACCATCCAAAGACTTACAAAATTCCCAAATTGCCCCTCCAACCGTCCCTAACAACCTCTCTCCCACTCCTTCCTCGC CTCTCTCTCGCACCTCCTTCATCGCTCTCTCCGCCGTCGCTGTTTCCGCACTCTTCGCCTCCGCCGCGATTCTCTCCTCC GATTCCAACTCCGATCACGACGGCGCGCCGAATCCTCTCTATGCCGGCGCCGAGCACGCCGTGCACCGCTCCGTCGACTC CTTCAACAAGCTTTTCCACCACGTCAAGCGCACCGGCGTCGCTGCTTCTGTCCTATGGCAGTCGCTCCGCTCGGTGCTGT CCTCCGCCAACCACGAGGTCCGTTCCGGCTTCGAGATTCGTGTCGCGGCACTGCTGGCAGATATCGCCGCCGCGAGCTCC AGCCGCAGGGCGGCGATTGTTGGCGCTGGAGGCGGCGCCGTAGTTGACTGGCTGCTCGAGTCTGTTGCGGTGGCCAAGGA CGGCGGTATCGGTACTCAGGCGGAGGCCGCGAGGGCGCTGGCGTATTTGATTGCGGACCCGAACGTTTCTGCTGCTGTGC TTGCTCGACCTCATGCTATTCCGAATCTTCTGAGGTTCATTTTCTCTTGCCAGCCTCGGCGTTCCAAGAATAAGAAGCAG CATTCAAGACGCAGTATATTTGATGTTTCTGATTCTTTGAAAGGCAGGAGCATGCTCGTGGCTGCCATCATGGACATTGT TACGTCCAGCTGTGACAATGCAGAAAAGGTGTCATTTAGGCCATCGTTGCCTGGAAATGCTGAAACCAGAGACATTGCTG CAGCCCTACAGGTTATTGAGGAAGGGGGTTTGCACTTGGATGAGCCACCAGAAGGTGAAGATGACGATGATGATGGTGGG ACAGGAAGGAAAGGGATTGGAATCAAGATACTTGGAGGTACCACTGTTTTAGGGCTTTCGAGGACCAGCAGCGTGATGAA GTTGGATAATAACTCTAATTCCAGTCATGAAGAATCATTGAAGCATCATACTCCAAAACCCCTTGTGTATCAAAGTGATA AGTATGACAATTCACAGGCACAACACAATATGTCTTCTGCTGTTGTTCCTGGTCTATGGGATGATTTGCATTGTGAACAT GTTGCTGTTCCTTTTGCCACTTGGGCATTGGCAAATTGGGCAACGGCATCACAGTTGAATAGATCTCGCATACAGGAACT GGATCAAGATGGAAATGCTATCTTGTCTGCTTTAATGGCACCTGAGAGATCTGTTAAATGGCATGCAAGTTTGGTGGTGC GGTTGCTATTAGAAGATCGCAATACACCTTTGAATGAATCTGTTTCTGATTGGAGTTCCAGTCTCCTTTCTACTATTTCT CAGGCATGTAAGCATGAAGATGTTTCATTAGCTCAGGTAGCTTTTTCTGCCTTTCTGTTATCTGTTGAGAGGAGTCCGGG CGTGCAGAAGATAGTGATGGAGAAGGGTCTTAATTTGATGAGAGATATTGCTAAACAGACAACAAAGCATAAGCAGGTCC AAGAAGCAATGGCAAAGGCATTAGAACTACTTTGTACTGGGGACCTGCATTTATCTCTTGAAGAGAGTCAAAAATGGTCA GGCATTCTTCTTCCCTGGGTTTTTGGAACATTTTCTTCAGATACTATACGAAGTTCAGCCATAAGGATTCTTTCTCAGAT CTTAGAAGACTATGGAGCATCATGTATACCACTTTCTCAAGGATGGTTAGCCATGCTCTTAACTGAAGTACAAAATTCCA TCAAGAAATCAAATGATAAAGGAGCCAGTCAGCCTAACAGTGATAAAGTGAAGACTTCAATCAATAATGCAAATATTGCT TTGGCTGGACAAGTTGCAAATCAGCTATCTAGTGCTGTGGTCAATCTGGCAGCTAAACAATTGAGAATTGCGTCTAATTC TGGGGATACATCCACTCTGGCTGATTTTCTCTCTCTGGAACCTCTAGCAGGACCATTTAAAAATTTAAAAAAAGATAGTC TGCCTAAATTTGGTGCTGCAGATTCTGCCTTGGCAACCCTGAAAGGTATTAAGGCTTTGGCTGAAGTTATTGCTGAAAAC TCAGTGTGTCAGGACAAGGTTGTTGATTTTGGCATTTTATGTTTGCTGAGGCGCTTTTTATTGAATGATGATTATGAGAA ACTGGCTGCCATTGAGGCTTATGATGCATCATCCAGAGCACATGAGGGGCAGGAGCGGATGTCAAATAAAGGAGACAAAC CTCCTATATCAGATAAAAATGATCCAGCTAGTGTCCGAGTTCCACCCACAGCTCATGTCCGCAGGCATGCAGCTCGGTTA TTGACCATCCTCTCCCTGCATCCCAAAGTCAAGAAGGTCGTTATAGCTGATGAAACTTGGTGCAATTGGCTTGATGATTG TGCTAATGGGAAGATTCCAGGTTGCAGTGACCTTAAAATGCAAAGTTATGCCAGGGCAACACTTTTAAATATATTTTGTG AGGACCAGTTTAATGGAATGTCTGAAACTGGAAGCTCTGGAACTGGAAGCTCTTCTGATGGTGGTGTAAAAAATAACTTG TGTCCTCGTTATGCTGACATGATATTCTTGATAAATTCTCATCTTCCGCACTGGAAGTGTCCCAAAGAAACAGATCGACG AGGTCCTTTCTCAAAAGACGTATCTGTGTCTACTTCTGATGTTACTGAGGATGGGATAAAAACCTTAGATGATGGCAACT GCTCTAGTTCAATTGGTTCAACTGAAAGTGGCCTAGATAGAAATTGTCCTCCGCTGGACGTAGTTTTTGTCCATGGCCTC CGTGGAGGACCTTACAAAACTTGGCGTATATCTGAGGACAAATCCTCAACTGTGTCCACCTTGGTGGAGAAGATTGATGA GGAAGCAGGAAAGCTTGGAACCTTTTGGCCTGGCGAATGGCTTTCCAGTGATTATCCAGATGCTCGCTTGTTTACCCTCA AATACAAGTCTAATCTCACACAGTGGTCTGGAGCTAGCCTGCCTCTCCAGGAAGTTAGTTCTATGCTATTGGAGAAGCTT GTTGCTGCAGGAATTGGGAATCGACCTGTTGTTTTTGTAACTCACAGTATGGGGGGCTTGGTTGTGAAGCAGATTCTTCA TACAGCGAAGGAGCGAAATTTTGATAATCTTGTGAATAGTACAATAGGAATCGTGTTTTATAGTTGTCCTCATTTTGGTA GCAGACTTGCAGATATGCCATGGCGAATGGGCCTTGTGCTTCGTCCTGCTCCAACAATAGGAGAGCTAAGAAGTGGGTCT TCAAGACTGATTGAGCTTAATGATTATATTCGTCAGCTTTATAAGAAAAGTATGCTTGATGTCCTCAGCTTTTGTGAGAC CACAGTAACTCCAATAGTTGAAGGTTATGGTGGATGGGCTTTGCGAATGGAAATTGTACCTATTGAGTCAGCATATCCTG GATTTGGGGAACTTGTTGTATTGGAGTCAACAGATCATATAAGTTCTTGCAAACCAGTGAGCCGCTTAGACCCTTCTTAT ACAGAGACATTAAAGTTCTTAGAGAAATTAAAAGCGTGTTATACCTGA 

Protein sequence (LotjaGi5g1v0025600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLRICLRTTRPFLRFPRPRYISRKSFNSPSKDLQNSQIAPPTVPNNLSPTPSSPLSRTSFIALSAVAVSALFASAAILSS DSNSDHDGAPNPLYAGAEHAVHRSVDSFNKLFHHVKRTGVAASVLWQSLRSVLSSANHEVRSGFEIRVAALLADIAAASS SRRAAIVGAGGGAVVDWLLESVAVAKDGGIGTQAEAARALAYLIADPNVSAAVLARPHAIPNLLRFIFSCQPRRSKNKKQ HSRRSIFDVSDSLKGRSMLVAAIMDIVTSSCDNAEKVSFRPSLPGNAETRDIAAALQVIEEGGLHLDEPPEGEDDDDDGG TGRKGIGIKILGGTTVLGLSRTSSVMKLDNNSNSSHEESLKHHTPKPLVYQSDKYDNSQAQHNMSSAVVPGLWDDLHCEH VAVPFATWALANWATASQLNRSRIQELDQDGNAILSALMAPERSVKWHASLVVRLLLEDRNTPLNESVSDWSSSLLSTIS QACKHEDVSLAQVAFSAFLLSVERSPGVQKIVMEKGLNLMRDIAKQTTKHKQVQEAMAKALELLCTGDLHLSLEESQKWS GILLPWVFGTFSSDTIRSSAIRILSQILEDYGASCIPLSQGWLAMLLTEVQNSIKKSNDKGASQPNSDKVKTSINNANIA LAGQVANQLSSAVVNLAAKQLRIASNSGDTSTLADFLSLEPLAGPFKNLKKDSLPKFGAADSALATLKGIKALAEVIAEN SVCQDKVVDFGILCLLRRFLLNDDYEKLAAIEAYDASSRAHEGQERMSNKGDKPPISDKNDPASVRVPPTAHVRRHAARL LTILSLHPKVKKVVIADETWCNWLDDCANGKIPGCSDLKMQSYARATLLNIFCEDQFNGMSETGSSGTGSSSDGGVKNNL CPRYADMIFLINSHLPHWKCPKETDRRGPFSKDVSVSTSDVTEDGIKTLDDGNCSSSIGSTESGLDRNCPPLDVVFVHGL RGGPYKTWRISEDKSSTVSTLVEKIDEEAGKLGTFWPGEWLSSDYPDARLFTLKYKSNLTQWSGASLPLQEVSSMLLEKL VAAGIGNRPVVFVTHSMGGLVVKQILHTAKERNFDNLVNSTIGIVFYSCPHFGSRLADMPWRMGLVLRPAPTIGELRSGS SRLIELNDYIRQLYKKSMLDVLSFCETTVTPIVEGYGGWALRMEIVPIESAYPGFGELVVLESTDHISSCKPVSRLDPSY TETLKFLEKLKACYT 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 59 59 -
MobiDBLite 23 51 29 -
Phobius 60 78 19 -
Phobius 79 1215 1137 -
Gene3D 113 243 131 1.2E-6
SUPERFAMILY 124 626 503 2.24E-12
MobiDBLite 303 326 24 -
MobiDBLite 760 786 27 -
MobiDBLite 760 779 20 -
Gene3D 950 1148 199 8.6E-12
SUPERFAMILY 953 1209 257 7.48E-15
Coils 1204 1215 12 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0025600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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