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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0048500 |
| Transcript ID | LotjaGi5g1v0048500.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | G-protein coupled receptor 1; TAIR: AT1G48270.1 G-protein-coupled receptor 1; Swiss-Prot: sp|O04714|GCR1_ARATH G-protein coupled receptor 1; TrEMBL-Plants: tr|B6GV49|B6GV49_LOTJA Putative G-protein coupled receptor; Found in the gene: LotjaGi5g1v0048500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8122994..8128369) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAACCTCCGCCGCCATCGGCGGCGCACTCACGGCGCACGATCGCTGGATTCTTACGGCGGTGAACGCCGGAGCATC GAGCCTGTCGTTGGCTGGGTCCAGCTTCATTGTACTCTGTTACCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGC TCGTTTTCTACCTCGCCCTCTCTGTATGCATCATTTTTCTTCGCTTCCATATTTATCTTCTTCAGATCTAAAACCCTACG TTTAAATATTGCTTCAACTTTTTCATTTGTCACTTTAACTCTTCGCACAGTTCTTATCTCTTTCAATTGAAATTACTGCA TTGTCGATTTCACATTCTTGTTGTTCTTGTTGTTTTTGGTTGCATCATGTTGCTGCTTCTCATGAATGTAATCAATCAAT TTGATTTTAGAACGAATAAGCATAAAACCACTGTTTTGAGCTTTCTCAATTAGGTATTCATCGCTCTGAAGATAGGTTAG CTTCTACTGTAGTTCTAACCAGTGTTGTTAATCACGGATCGAGGAAAATAGCGGAAAGCGAAAAATCCGCTATTTCAAGT CCACATAGCGGAAAAATAGCGGACAATAGGGGAAAATAGCAGAATAGCGGTGAGCCCTCAGAGTGCTATGTTATAGCGCC GCTATAACCGCTATTTGACCACACTGTAATCTAACTAGCAGTCTAATGCTCAAGAATGAACCTAAGCTTAAGTCAGTCCC AGTTCATTTGGGGACTGCTTGATCCAGATTTTGATCTCAGTAAGGCAGTTTTGCTTCTTCTTTAGCCTAATTTCGCACGC CAGGTGAATTTAGACTACTCTGTAAAACAATATTAATAATAATAATAATAATAATTATAATAACAGTTAGGACTTAGGAG TCTAGATATCCTTTAGTATGTTTAAGAATATAACTTATACCTAGTGAGCTTGTAAATAGAGTATGCTTATCAATGGAATT TAGATGTTGTGAAACTATTACTAACTCATTATTTACAGTAGAAGTTACCTTTGCTGATGAAAACTTTTAGATTACTAGTA AACGTTTGAAGTCATGAAACCAACTTTTGTTGGTTTTTTTTTACCCTAGCCACTTTAATTTGTATTTGTAATGCTGTTTT ACAATTGAGAAGTCGGGGTCCTTCACATCAGAACTATATATGTCTGTTCCTTTGCAATAGGTGGTCAGTTATTACATTGT TTTTTCTTTGTTTCCTCTTCTGAGTCATAATGCTCTGTTATCATTTATTGCCTGTTGCAGGATATGCTTTGCAGTTTCTT CAACGTAATAGGGTATATTCGCTAGATCAACCCCCATCTTCTTTAAATGTATGTATCAACTGAAGCTGTTCATCTTGTGA TTGATAGAAGTTACATTTTTATACAGGGACCCATCCCAAGGTTTCTTTTGTTATGCTCAGGGATATAGCACACATTTCTT TTGTGTGGCGTCTTTCCTATGGACTACAACTATTGCATTTACCCTACACCGTACTGTTGTAAAACACAAAACAGATGTTG AAGATTTGGAGGCCATGTTTCACTTGTATGTTTGGGGTATGCATCTATGAATGACCAGCTTTTTATATTCTAGCTGTAGA AATGGCCTATTTTTGCAGTAATCTACAAGTCCTGTAACTTCCGATCCCTTGAATTCTAACTTCAAAATGAATTTTTGGAG CAAATTAATGATGAGATCATAAGAAGTGATGTGAACATTGATTATAGCTCAAAATAACATGATTTAGCCTGAAAGGTAAA AACAATCAGCTCATGCATGGTCTATGGCCCAAACTCCTTAATTTGAGTGTTTATGGCTCAAAACCCCCTCAATAGCTCTA TCTTAGGCCCAAATGATGGTGAGGACGTGATTGAGCTCAAATTCTGATGGAGAGGCTTTGTTTAGCCCAAGTGTCTTAAA CATGTCCATTTAGTGCTTCTTTAATCCTCTTAGCCCTTGCTCTTTTAATTTGTCCACTAGATATTTGCAATGCATCCTTC AAGAGCTTGAATTAGATTGTCCAATCCTTAATTAACATCACTTCTTATGATCTCATCAATTAATGTTGGTGGAATGGCTT CGATAATGTACGAAGAGTAGGGCTTTTAACTTCTGTCTTAATTTCAAGCATTTTATTAGCAACATTTAGAGAGCTCATTT GATGTACTTTTTGACTTTTCATAGGTACATCCCTTGTTATGACAGTTATGCGCTCCTTTGGTAATGACCATAAGCATTTT GGTGCCTGGTGTTGGACTCAAACAGGTCGCACAGGGAAGGCAAGTAGTCTTAGGACTACAGGTTACATATTGTTTATGTA ATTCCTGAAAATTTCTTTGAAGTTTCAACTTCCGCTTTGTTTCTCTCCTTTTACATATGATATAGAATGTGTTTTGATTC ATTAAAAGAGGAACTTGCACTGGGGACCAGTTTTCTGCACTTTTAAATCTAAAAATTAAACATAAATTGACTTTAAGATA ATTTTAGTTGACTTTATTTAAAGCATGGACGTTGTCTTTCATAACTGTAGCAGGGGGTAAGTTGTTGGTTTCTGGGATTT ATTTGTAATTACAATTTGTTCTAAGTTATACTGTTATAGTAAAAAATAAAACATTATGCTTTCAGGAAATGATACAAAGA CACTAAGTAGGGAATCCCCTTTACTTTAATGATTTAGTATCTCAATTATGTTTGTCAGTCTCTCTCTTAATATTTTTTTT ATCTGGGAAATTTGACATCCCATAAATGCAAATGGTCTGGAAATTAAAGTAAGCACTTGGTTGCCGATGAGAAGAATGTT ATCCATGTTGCAATTTTTGTTCTTCAAAATCAAATATGTAGTTATTAACAGGAAAGGAAGCTAAGGTTAACAGCTAATAA AAATCCATGCAAGAAAATTGTGCAGGCCATTAAAAAAGTTCTTACAGCATTCTATCCACGTATTTGTTGAGGGCTTAGGA TGTTTCTCATAATGGCATTATTGGTTATCCTAAAGAAGACTGGTAGTAATGAATATTAGAAAGAAATCTGGATAACAACA GATACCTCCCAATTTTCTGCAACTTTGGATTGCATATCTACTTCATTTTTCGTATGTATTTTGTTTATCAAAATAATCTG CTCATTTTTCTATTTCTCCTTATCCATTATAAACAAGTACCTTTTCCTGTGCAGGCAATTCATTTTATAACATTTTACAT GCCACTTTGGGGTGCAATTCTATATAATGGGTTTACATACTTGCAAGTGATACGCATGCTGAATAACGCAACCCGTGTAT GTATCTATCTTTGTTGCTTTTTCCGAAGACAAAAATGTGCTTAGGTGACTTGTGTGACCTCATCTATCATTTCTTGGCAA ATTTCAGATGGCAGTTGGCATGTCAGGTCAAGCTTATGTCTCAGATACAAGAGATAACATGAGGGTATTTTATCTTGTTT TTTTTATGTTTCTGTTAGAATATATAAAACATACGTCATAATATTAACATTTTATCTTTAGAACATTTTAGAGTACCTTA GTTACCTAAGGTTTATTTCCATATTTCCTTAAATTTCATAATTTGTTTATGATATGTATTAGAATTAAGAATATATTACA AGTATATATAGATATTAGTTTTTTGTGTTTTGTAACTATTAGAATTTGGGAGGCCTAACTCATCCCTAAAGCTAGCTCAA GAGTTGAGAGTTGCTCTACCCTTTATAATTACTTGTTTGGCCATATCTCTAGCCAATGTGGGACTTCTAACACACCCCCT CACGCCCAGGGCTGACATCTGGACTTCTAATAACTAACCTTTTCTTTCATATTTGACATTTTACGTTCTGCATTGTGGGA TATTTATTGTGATATACTGTTTCTGTTCAAATGCCTTATTGATCACTCTGAGGCAGGATTGTTTTGGAATTCAAGTAAAT TTTCATAGATGCTTCTCACATATTTTCATGGGAAAATATTAAAATTAATACATTGTTCTGTGATTTCTAATGTGGTTTAG AGATTGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCA CATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACATCCCACCACGCTCCGCA GCCCCGGCGCCCACGCGGGCTGGCTGTGCACTAGCCCCACGACTAGTCCCGGGCGAACACTGCAATGCCGGCGTCACCAC CCGCGCCGCTCGTTTGCAGCTCAGAGACATGGTGGAAGGCTCTGATACCATTGATAAGAACCTTGGGAGAACCACACCAC AAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGGACTCA AGTCCCATACCTTGCAATGGGGTCCTAACAGAGATGCCCACCCCTTCTTTTTGTCACTCCAGGATTTTCATGAATAAATT ATAACCATCCTTAAACCAATTGCTTAAGATGAAATTATAATATCTAGCCTCTATGTTTCCATTGAACAACACTTAGTATT TTGTGCTTTGCATTGCAGGCTCTGAATCGCTGGGGATACTATCCACTAATTCTAATAGGATCTTGGGCTTTTGGCACTAT TAACCGTATTCATGATTTTTTTGACCCCAGCCATAAGATCTTTTGGCTCTCACTTCTTGATGTTGGAACCGCTGCTCTAA TGGTATCTACTAGTAACCATACTGTTTTCAGCATTATTTTCCATTCTCTGAATGTTCTATAACTTATCTGGAAACTTGGC GTGCTTGGCATTCATTGATAAATCCTCCCTATCTTTTGTGATTCCTCCCATCTCCTAGCACCCTCCTATAACATTTTACT TTCTCTAACAATCAGGCATTCTCTTCCCTACTAATATGTGAATGACAAACTAAAAGGCATTATCTAATTTGTAATGCAGA TTCATCTAAACTGAGTTCAGATTTGATGTCATGTGAAACTGTACATCAATTACAACATAGTGAAAAGTACTAATATGTCA TCTTGCTAAGCTTTCTCACTTTGTCTACTTACTGCAGGGGCTCTTTAACTCAATTGCATATGGCCTCAATTCTTCTGTTC GACGAGCAATTTGTGAAAGACTGGACAAGTAAGACCTGATTCTGCTCTATCTGCTCTGAGGGATTTTTTATTAAATTGGA TCATCCTAAATTTGTTTCTTTAACTTTCAAGTTGCAATATCCTTCATCACATATTCTGGATTCGACTTGTGCACTCTTGT GGCCAGCCTAATTATGTTCGCCTTACCACCTAGCCTTTTTGTTTTAAAATAATAAAAAAAAGAAGAGAAAAACCTGTTTG ATAGAAACAGTTTTGA
CDS sequence (LotjaGi5g1v0048500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACCTCCGCCGCCATCGGCGGCGCACTCACGGCGCACGATCGCTGGATTCTTACGGCGGTGAACGCCGGAGCATC GAGCCTGTCGTTGGCTGGGTCCAGCTTCATTGTACTCTGTTACCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGC TCGTTTTCTACCTCGCCCTCTCTGATATGCTTTGCAGTTTCTTCAACGTAATAGGGGACCCATCCCAAGGTTTCTTTTGT TATGCTCAGGGATATAGCACACATTTCTTTTGTGTGGCGTCTTTCCTATGGACTACAACTATTGCATTTACCCTACACCG TACTGTTGTAAAACACAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTTTGGGGTACATCCCTTGTTA TGACAGTTATGCGCTCCTTTGGTAATGACCATAAGCATTTTGGTGCCTGGTGTTGGACTCAAACAGGTCGCACAGGGAAG GCAATTCATTTTATAACATTTTACATGCCACTTTGGGGTGCAATTCTATATAATGGGTTTACATACTTGCAAGTGATACG CATGCTGAATAACGCAACCCGTATGGCAGTTGGCATGTCAGGTCAAGCTTATGTCTCAGATACAAGAGATAACATGAGGG CTCTGAATCGCTGGGGATACTATCCACTAATTCTAATAGGATCTTGGGCTTTTGGCACTATTAACCGTATTCATGATTTT TTTGACCCCAGCCATAAGATCTTTTGGCTCTCACTTCTTGATGTTGGAACCGCTGCTCTAATGGGGCTCTTTAACTCAAT TGCATATGGCCTCAATTCTTCTGTTCGACGAGCAATTTGTGAAAGACTGGACAACTTGTGGCCAGCCTAA
Protein sequence (LotjaGi5g1v0048500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATSAAIGGALTAHDRWILTAVNAGASSLSLAGSSFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFNVIGDPSQGFFC YAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGK AIHFITFYMPLWGAILYNGFTYLQVIRMLNNATRMAVGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDF FDPSHKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAICERLDNLWPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 16 | 16 | - | – | |
| PANTHER | 9 | 288 | 280 | 1.9E-114 | – | |
| PANTHER | 9 | 288 | 280 | 1.9E-114 | – | |
| Gene3D | 15 | 288 | 274 | 1.2E-30 | – | |
| SUPERFAMILY | 16 | 282 | 267 | 1.1E-13 | – | |
| Phobius | 17 | 42 | 26 | - | – | |
| PRINTS | 19 | 34 | 16 | 8.8E-124 | ||
| ProSiteProfiles | 19 | 273 | 255 | 21.777 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Pfam | 28 | 273 | 246 | 1.7E-13 | – | |
| PRINTS | 30 | 48 | 19 | 5.7E-53 | ||
| CDD | 36 | 272 | 237 | 4.13735E-23 | – | |
| PRINTS | 36 | 50 | 15 | 8.8E-124 | ||
| Phobius | 43 | 53 | 11 | - | – | |
| PRINTS | 49 | 64 | 16 | 5.7E-53 | ||
| PRINTS | 52 | 74 | 23 | 8.8E-124 | ||
| Phobius | 54 | 72 | 19 | - | – | |
| TMHMM | 54 | 71 | 18 | - | – | |
| Phobius | 73 | 83 | 11 | - | – | |
| PRINTS | 80 | 98 | 19 | 5.7E-53 | ||
| PRINTS | 82 | 95 | 14 | 8.8E-124 | ||
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 84 | 105 | 22 | - | – | |
| PRINTS | 97 | 115 | 19 | 8.8E-124 | ||
| Phobius | 106 | 124 | 19 | - | – | |
| TMHMM | 119 | 141 | 23 | - | – | |
| PRINTS | 120 | 135 | 16 | 8.8E-124 | ||
| Phobius | 125 | 141 | 17 | - | – | |
| Phobius | 142 | 160 | 19 | - | – | |
| PRINTS | 159 | 171 | 13 | 8.8E-124 | ||
| Phobius | 161 | 185 | 25 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| PRINTS | 172 | 195 | 24 | 8.8E-124 | ||
| Phobius | 186 | 217 | 32 | - | – | |
| PRINTS | 215 | 236 | 22 | 8.8E-124 | ||
| Phobius | 218 | 235 | 18 | - | – | |
| TMHMM | 218 | 237 | 20 | - | – | |
| PRINTS | 221 | 239 | 19 | 5.7E-53 | ||
| Phobius | 236 | 246 | 11 | - | – | |
| PRINTS | 245 | 262 | 18 | 8.8E-124 | ||
| Phobius | 247 | 269 | 23 | - | – | |
| TMHMM | 247 | 269 | 23 | - | – | |
| PRINTS | 253 | 272 | 20 | 5.7E-53 | ||
| PRINTS | 263 | 279 | 17 | 8.8E-124 | ||
| Phobius | 270 | 289 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane signaling receptor activity | Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction. | ||
| Biological process | Cell surface receptor signaling pathway | A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0048500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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