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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0072700 |
Transcript ID | LotjaGi5g1v0072700.4 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Adenylate kinase; TAIR: AT2G37250.1 adenosine kinase; Swiss-Prot: sp|Q10S93|KAD1_ORYSJ Probable adenylate kinase 1, chloroplastic; TrEMBL-Plants: tr|I1LYZ7|I1LYZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0072700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:12041633..12044989) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGCCGTGACCCGCCTCGCGAAGCGCTCGTCCTCCGTCTCCTCCCTCATCTCCAGGAGACGCTTCTCCTCCGAAGT CAACTCTCACGACCCGCCGCACAACGCCGCGCCCTTCCGACTAGTCCGGCCGCGTGAAGACCCGAGTAACAGCCATGTCC GGTGGGTCTTCCTGGGCTGCCCCGGCGTTGGCAAAGGCACCTACGCCAGCCGCCTCTCTAACCTCCTCCACGTCCCTCAC ATCGCCACCGGCGATCTCGTCCGTGAAGAGCTCACCTCCTCTGGCCCCCTTTCCACCGAGGTTTTCTTCTTCCTCCTATC TTCGCCTCAGAACCTTCAATTTTTTCTTCCCTTTCTGTACTCTGTTGTTCACTTTGAATTAGATTAGTTAATTTCCAATT CAATTATGAGTATAATTGTTACTTTTGTTTATGAAATTATGTGAATTGTAGCATTGGTTTGAGAATCATTCTATATGTTT CATATAAAAATTTGTAGTTGCAGTCTTGCAGATGTTAATTTATTTGGTGGGGGTCTGAATAAGTGGAATTCAGAATCAGA TAACTCCATGCCTATCGTTATCTGACTTTAGCATAGCAACTACTTGTTAGTCTTTTGTCATTTTTCTAACAGGCTTTTGG AATTGGACCACCCAAGTGCCCTCCATAGTGGCTATAATAAATTATGTTTATTATAAACTATATTGTCCCGCGTTGAGATG GCGGCGGAGCTAGATTATCATGAAGGCCACTGCTTAGGGGGACCCATAAGTTTGAGGAATTAAAATAAAAAATGCATGTA AACTTGTAAAGTATCAAGTTTTTCAAAGATATGGGGAACTTGTAGTCTTGTGGAAAAAGGTTGTGAGATCGATGTGTTTA GGTAGGTAGAAAGGTCTTCAATTTGGCCACGTAGGAAGAACTTGGAAATCTGAATTCTTCAGGTTTTGTTAGATATTCCT CACTGAGTCACTTGTATAAAAAAAGCTGTTTCTGACATGCTAGTTGTTTTGATTTGTTTCAGCGAACTAATTGTTCGAAT GGAATAGCATAATGCATCTTAATTTAATTTAAACCTCAGATTGGAAATGTGTGCTTCTGAGTTTGGACGCACTTAAAATA GTTTGGTATTTCCTTTTTTTTTTGCTTTGATTGGATGTAAACTTCTTTTACAACAGTATGCTATTTGTTACATGACTAAC AACTCTTGCGATGTTCTTGTTATCTGTTAGTTGCTAACTTCTGTTAAAAACATGCACAAGTTAAAATTGAGATTTGTTTG CTGACAATACCTTAAGCACTCTAATTATAAATATTCTTGCATTCTCTTGATGGATGCTGTAGTATTAATCTGTAATGTGC AGTTTATTAGTTAATCTTTAAATTTGGAAGATGAAAGCTTTGTGTAATTTTCATCAAACCAAAATAGTGAAATGAATCTT GATTGCTTCTCATTTTTATTTTTCCAATTGTATGTGATTAAGGTGTTGAATGTTATGCTATTCTTGATCTCTTAAAGATC AGCTTGACTGAAAATACATTGAGCTTTGACTAGATCACTGTATCCGTATTTCAATGTCATATGGTGTGGCATAACTGTTG CCTCTTTATTGGGATACTATATTAATTTTATGTCCATTTCATTATCACATCTACTTTCTGATTTGTTATTTTTGGTGTCT TACAGTTATCAGAAATTGTAAAGCAAGGTCAATTGGTGTCAGATGAAATTATTATAAGTTTATTGTCAAAGAGACTTGCT GCTGGAGAAGCGAAAGGTGAATTGGGATTTATTCTCGATGGTTTTCCTCGAACAATAAAGCAAGCAGTGAGTATCTTCTA TTTGGAAAAATGTGTTTCATTATAGGTACTCCCCTGTATTTTGATTGGAAAATCTTTTACATGAGCACAGGGAAAAAATA TTGATAATGGATTATGAAACACTAGAATTAACTCAACACTAGAAACTATCATATGAGGTGAGTGAGAGTTACCCAAGCCT TTATAAGCTCTACTTTAGTCACGCATCCAGTCAATGTGAGATCTCAACCAACCCCTTCATGCCCAAGACTGAGCATCTGA AGCATGGATATTATAGGACTTCTTTTTTATTGCACTAAGGAAGCTCTGGGGCAAGTAATAGGAAAGTTGCGAGGTCAAAT AGTTTGCACCGTAAAGTCCGTAGGACCATGTATTTTTTTACAGCAGTGGGTGGCCCAATAATGAGTTTAGGATAGGCTTT ACAGATGAGAGAATATTATATATAATAAGTGTAATAAATACAATGATCAATAATTACCCATATTATCATAATTAGATAAT AATATAATATATAACACAAAATCAACACCATATTACTTTATTTTTTGACAAATGTAGTTTCTAATGAAAAGTAAACGAAG AGATTTTGCAGATATGGATACTATGATGATTTTAGGCAACCTACCTTATGTAGGGCTATAGGCCCCTTTATTTTCCTACC TAATTAGCTACTACTTTTCATCATTTTTAAAAAAAATACTTTTCAAACCTTGAATAAGTATATTAAAGTCTCTCCGTGTA TCTATTTTTTGCATCTCATCATGTATGTTTCCAGAACCTAGATAAATATTGTCCCCTTCATCCCTATTATGTACTAGAGT TGCAACGATTGTATAGCATTCTTACTTCTCGTAAAAGCAGTTTATAATAAAAGGATTTTTACATTGCATTTCTTGTGTTC AGGAAATACTAGAAGGGGTAACTGACATTGACTTGGTTATTAATCTGAGGCTCCGAGAAGATGTACTGCTTGAAAAATGC CTTGGTAGAAGAATTTGCAATCAGTGTGGGGGAAATTTTAATGTTGCTTCCATTAACATCAAGGCTGAGAATGGGAACCC CGAAATTGTCATGGCTCCACTTCTTCCTCCTACGGATTGTATGTCAAAGCTCACTACTCGATCAGATGATACTGAAGCAG TGGTCAAAGAAAGGCTTCGAATATACAGAGAAATGGTATTGCGGCACTATATTCTTATTAATATTCCTATTCCTATCATT ATTATTCTGAGTAGACTTAAGGAAGACTGGCTGCTTGAGTGGATTTGAAGTTGCATGTGTGTGTGTGTGTGTGTATATAT ATATCTTTAATATGGGGAATTGGGGATTATGAAAGGTCTGGGTGAAGTTGCATAAAAAGTTTCTTTGTAATTGGTTTTCT GTCATGTTTTCAGAGTCAGCCTGTGGAGGAGTTTTATCGCAGTAGAGGAAGATTATTGGAGTTTAACCTGCCTGGGGGAA TCCCAGAATCTTGGCCAAAGTTGCTACATGCTCTTAATCTTGATAACTACGAGGACAAGCGCATTGCCACAGCTTAA
CDS sequence (LotjaGi5g1v0072700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCCGTGACCCGCCTCGCGAAGCGCTCGTCCTCCGTCTCCTCCCTCATCTCCAGGAGACGCTTCTCCTCCGAAGT CAACTCTCACGACCCGCCGCACAACGCCGCGCCCTTCCGACTAGTCCGGCCGCGTGAAGACCCGAGTAACAGCCATGTCC GGTGGGTCTTCCTGGGCTGCCCCGGCGTTGGCAAAGGCACCTACGCCAGCCGCCTCTCTAACCTCCTCCACGTCCCTCAC ATCGCCACCGGCGATCTCGTCCGTGAAGAGCTCACCTCCTCTGGCCCCCTTTCCACCGAGTTATCAGAAATTGTAAAGCA AGGTCAATTGGTGTCAGATGAAATTATTATAAGTTTATTGTCAAAGAGACTTGCTGCTGGAGAAGCGAAAGGTGAATTGG GATTTATTCTCGATGGTTTTCCTCGAACAATAAAGCAAGCAGTGAGTATCTTCTATTTGGAAATACTAGAAGGGGTAACT GACATTGACTTGGTTATTAATCTGAGGCTCCGAGAAGATGTACTGCTTGAAAAATGCCTTGGTAGAAGAATTTGCAATCA GTGTGGGGGAAATTTTAATGTTGCTTCCATTAACATCAAGGCTGAGAATGGGAACCCCGAAATTGTCATGGCTCCACTTC TTCCTCCTACGGATTGTATGTCAAAGCTCACTACTCGATCAGATGATACTGAAGCAGTGGTCAAAGAAAGGCTTCGAATA TACAGAGAAATGAGTCAGCCTGTGGAGGAGTTTTATCGCAGTAGAGGAAGATTATTGGAGTTTAACCTGCCTGGGGGAAT CCCAGAATCTTGGCCAAAGTTGCTACATGCTCTTAATCTTGATAACTACGAGGACAAGCGCATTGCCACAGCTTAA
Protein sequence (LotjaGi5g1v0072700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAVTRLAKRSSSVSSLISRRRFSSEVNSHDPPHNAAPFRLVRPREDPSNSHVRWVFLGCPGVGKGTYASRLSNLLHVPH IATGDLVREELTSSGPLSTELSEIVKQGQLVSDEIIISLLSKRLAAGEAKGELGFILDGFPRTIKQAVSIFYLEILEGVT DIDLVINLRLREDVLLEKCLGRRICNQCGGNFNVASINIKAENGNPEIVMAPLLPPTDCMSKLTTRSDDTEAVVKERLRI YREMSQPVEEFYRSRGRLLEFNLPGGIPESWPKLLHALNLDNYEDKRIATA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 24 | 291 | 268 | 1.6E-134 | – | |
PANTHER | 24 | 291 | 268 | 1.6E-134 | ||
Gene3D | 42 | 283 | 242 | 1.8E-56 | – | |
SUPERFAMILY | 52 | 278 | 227 | 1.36E-26 | ||
Hamap | 53 | 279 | 227 | 36.84 | ||
CDD | 54 | 262 | 209 | 1.85397E-69 | ||
TIGRFAM | 54 | 278 | 225 | 3.2E-62 | ||
PRINTS | 56 | 69 | 14 | 8.9E-19 | ||
Pfam | 58 | 256 | 199 | 1.0E-36 | – | |
PRINTS | 84 | 98 | 15 | 8.9E-19 | ||
PRINTS | 135 | 151 | 17 | 8.9E-19 | ||
ProSitePatterns | 135 | 146 | 12 | - | ||
PRINTS | 243 | 257 | 15 | 8.9E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Adenylate kinase activity | Catalysis of the reaction: ATP + AMP = 2 ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. | ||
Molecular function | Phosphotransferase activity, phosphate group as acceptor | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor). | ||
Molecular function | Nucleobase-containing compound kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate. |
Expression pattern of LotjaGi5g1v0072700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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