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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0095000 |
| Transcript ID | LotjaGi5g1v0095000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein ABSCISIC ACID-INSENSITIVE 5; TAIR: AT2G36270.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5; TrEMBL-Plants: tr|I1L9C8|I1L9C8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0095000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:16850480..16855597) extracted from Lotus japonicus Gifu genome v1.2.
ACCATAATACAAAAGCCGGGAGTACCATAATACAAAAGCCGTTCTCACCCTTTCCTTTCCTTTCCTTTTTCTCATTCGGA AACGATTGCGCATCCAAGTGGAATCCTCTAAAGAAAAACATTTCTCAGTTGGTGCGACTGCTTCTTACAGGACTCCTTCC CACGACACAAATACGAGGTCGGATTCCAATGTCTCCTTCACCAAACTCTATGTCGTCGTTGACGCCAACATTGACCTCCC TCCTCATTATACTCACATTCTTTCAATTGTTTGATTATAAGAGAAATTCATTTAAAGGGATTTTCTTCCCTGATTGGTTA GGTTACTGGATCAGGTATATATCCAAGTTTCAGAGGTTGGTATTTTTTGCTTTCTCTGAAAATGTGTTTTTATTTTCTTT ACTATGATTGATTTCTGCACTTGCACTTGCAGGGCTTTTGGTTGCTGTTATAGACACTGTGTGTAAGTGTTGTCACTGCT ACTCTCAAGAAAAAACGCTCTTCTTCATATGAAGTCTCAAATTAGTCTCTAAAAATTGTTGTCTGAGGTACAAAAGGAAA TTGTAGCTTCATTAGTAACTAGCATTTGAGCTGAACAGAGAGATTTCAGGTTTTTTTTTTCTCTCTAGTCTTTATATATT GCAATTTGCTATGATGTAATGCAATCATAGTTATTCATGTTTTAGTGGTTTAGTGCTCTATCCTTTAAGCAAGTGGTTGA TAGTTGGAACTTGGAATTTCAATTCTTGTGAATGAAAAAACTCCTTACTGCGCTTAGTGCGCTGATAGTGGAGCGAGAGA TTAGTCTCAGTTGTGAGACACTTTGATCAAGACCAAAGGTTTTATCAGATTAGTGTAACATGGATTTTATGAGATTATAT AGACTTTTACAAGGCAAAGTGTGTATATATTTCAGCCTTAATTGTCAGTACTATCAGCCAGCCATAGCTGGTAGCTAATT GTTTTGGTTTGATTTTGTCGGATTTCTCTTCATTATGAATAATGTTCATGTAAATTGTGCCAGCATGAGGATTTGGTTGT AACTACCTTTTTATTTTGGTTGAGATTGTATTAGCTAATTTTGTATACCACATTAGAAACTCTTCTATTTTGTTTTGGGC ATTCCATTTTCACAATTCTATGTTACACCAGGTTAAAAATTGGTGCACCACCAGACAACTATATTGTTACTACTATGGGT TTGCGAATGAAGTGTGGTTAGGATGTTGTATGCTCCCACTGAGAGTCTTGTTCCGCTTCTTGTGTCAGATAAGAGTTGTT GTGCTATACAGGTAGTCTTTGTTTGTGTTTTAATTTCGTTGCAAACCAATATTTCTTACTACTATTATTTAGTGTATATA TATTATATACAATATGTTTATTATAAGTTAATTTGTAGCAATTCCTTTAAAGTTCAGTTTAGGAAAATTACAGTATAATC TTCATGACAAAGACTAACTCAGTACCTCTACTATATTTGGCACAATATTAATGGATAAGGAGGTCCATACCAACTGCCAA GTGCACTGCACTTCTTTCAATTTATAGACTGATGGTAGTGGTGCAGTTTCAACTTAGCAGATACAGATAAGGGTTTGAAT TTTGTTAGTCGAACTTAGTGTAGAGAAAGAACTTCACGTCAGTGGAACCAAAAAATCATTGAGACCTACGCATATGTAAA TCTATCTTGATCCAGTTTTGGATAATATTAAATAATACAAAGAATTTTAGAAAATATATATGGTTTGTTGCTACTAAACG ATGGGGAAAAAGGAGCTGCTGATCCTGAGGGAAGCACAAAGCCCCCATAATCTATTATATAGAAAATTTATTCTCTTATT TCAAAGGCTTATTTTTGTTTTAGCTAACTGATCCATTACTAATTGTTGATGTTGGTCATCAACATGCAGTGCAGTTTTGG TTCATAACACTGCATTAAGTGCCGGTTTGGATATGAGCTTATTAGGATTTACTTACTCACTAAATAAAATCTAATAATCT CAAATAAGTTCTCTTCGTTTGTATCAAAACAGGTACTAATTCAACAATTGTCTCTAATGCAGGTTTCTAGTGCTTATAGT TGGATAATATCTGAAGTTCTTGTGCATGACAGAAGCAAATTGACTATGTTGTCTCGAAGCAGCCCTCTATTTTCACGCAT TGAAGTCGTGTACCTGCTATTCTCGGATTCCTCCCACGAAAAAGACAGAAGAAAGAAATCAAATAAAAATTAAAAAAATG AAACTATTGTAACCAATTTGTGTATGGTTTGTCATCTCGAAAATCTTAGGCAGGTAAACAACTCAGAATGGAGAAAAATG ATAAATTTCCCTTTATTTGTAACAATAAAAACAAGAGAAAAATATATTTACCATCCATGTTCTTAAATTATTTTAACCTT AGCTTAAGTAGAGTTCTTAAGTGTTTGTTTGAGTCATTGTAAATGCAATTGCGTTAAGTAAAAGTTCTACCCGTAACTGA CTCAAGAATATATTTAAATTGGACGCTTCTGTTGCAGGACAAAGTAAAAGAGAAAATGGTGGTGACGGGTTCCGAGATGA ACTCCCAAGGAGGTGACGGGGTGTCGAATCAGCAAGAAGCAAACAAGAACCATTCATCATTCTCATCGCTGGGAAGACAA TCGTCCTCAATCTACTCCCTCACGCTCGATGAATTCCAGCACACACTCTGCGAACCGGGCAGGAATTTCGGCTCTATGAA CATGGACGAGTTCATCAACAGCATTTGGAGCGCAGAAGAAAACCAAGCCACCAACAACAACAACCCTAACCAAAACAACA ACAACATCAACAACAACAACAACTTGTCTCTGAGCGAAACCTCGACGGAGAAATTAGGCTTCATAAGGAAGCAGCCAAGC CTCCCTCGACATGGTTCTTTAACAATCCCTGCACCTCTTTGTAGGAAAACAGTGGATGAGGTTTGGTCTGAGATTCACAA AGGGCAGCAATCTCAGCAGCAGAACAACAACAACAACAACGGTCAGAATACCGAGTCTGTCCCTCGCCAACCTACTTTTG GAGAGATGACTCTGGAGGATTTTCTAGTCAAGGCCGGGGTAGTTCGGGAACAAGGTGCAAATTCAAATGCAATGCCTCTC CAGGTTCCTTCTTCACAACACCAGTTGCTGCAGCAGCAGTTTGGAATGTACCCAAATGTGGGGCCCTCATTTAGGCCCAC GATGGCGATTGGTGCTGGCGGTTGGGGAGGGAATGCAATTGCGGTCGCGGTTGCGCCACCTTATCCAGTTGTGGCTCACA GTGGCAGTGGTGGTGCAATTGTGGAGAGTAAAAGAGATGGTGGGTATTCGGTGCCAGGGGTTGGTTATGGAGGGCAGGTG ATGAATGGAGGTGGTGGAGGGTATGGGGGTAATATGGGAATTGGCGCGCCGGTGAGCCCAGTTTCGCCAGACGGGATGGG TGGAGGTGAGAACAGTGGTGGTCAATTTGGGATGGAGATGGGTGTGTTGAGGGGACGAAAAAGGGGTTTGGATGGTCCTG TGGAGAAGGTGGTGGAGAGGAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCAGCCAGATCAAGAGCAAGAAAACAG GTACCTCATTTATTTCATTTGAGCTTTTAATTTCAAGCAATTATATTGTTCTATGTGTTTTCCTTTGGTGAAATGATCTT TTCTATTTTTGTCTTGGTAGGCATACACAATTGAATTGGAAGCAGAATTGAATCAATTAAAAGAAGAGAATGCACAGCTG AAACTAGCTCTGGTATTAACACAGAATGATACTTTCATTGAACAATATTGAAATCTTTTTATTATGTTTTATTTGTTGTG CTATATTGAAAAACTTTTTATTGCAATTTCTGACTTGGACATCATGCTTCTATTCTTCAGGCCGAGCTTGAGAGGAGAAG AAAGCAACAGGTAACTACTACTCTGATTTAATTAAGAACACCAATTTTCTTTAAAATTTAGAAGATCTTGATTACTAGAG ATTCAGATCCTTCATCTCTAAATGGTGTCTCATTTCTCGTTTCAACCAATGAAATTATGTCATATGACATTTATAACCTT ACATAGGTGGTTCTTAATTAACATGACACAATCTCATCGGTGGGATATGAAATAAAACATCATTTGAGGACATAGGATCT TAATTCAATTATTAGAGGATTTTCTTTCCATTTCCATAATGGTTTTAAATCAAGGTCTACTGCCGTGATCTCGGCTGTGA TTTAGGCCGCGATTTGGGCCGTGACGTTAGGATTTTGGAGCTTTCTGAAATTGCGATATCGACCACATACAGATGTTTAT TCATTAGTTTCTGCAAAATTTGGAAGATGACTAGGCAACTGTGACGCGTGAGGACGTTAGGATTTTGGAGGTTTCCAAAA TCACGATTTAGGCCACATACAGATGTTTATTCATTATTTTTTACAATATGGAAGCTCACAAGGCAATTGTGACGCCATCA CCGAAATAGCTTAATGGTAGAGCATAGCCTTGACCACAACCCAAAACACTTAGAAAGGTTAAAAAGGAAGCAATGAATTA CATATAGTTTTTGTCCTCCCCCTTTCTTTTAAACCAAATAATTTAAAAGCACTTTTAAATGTTGATGTTTTAATGACCTG GTGCAGTATTTAGAGGAAACGAATGGGATGGTTCAAACCAACGCTCAGAAGACCAAGAAGAAACTAAGTTCATTGAGAAG GACTCTAAGTTGCCCTTTTTGAGAAAATTATTATCTGCATCTGCAACCAGTGAAGTTCTTGAATTCTAGTACACATAGGA ATTGGCTGTTGAGTATCTTCATGAGTGTCTTACATGAAGGAGATTCCATGAAACCAAAGCAAGAATGGAGGAACCAGACA ACGAGAAAACTCAAGACTAGTGCAGAAACCAGCTTGATGGAGAGGTGTGAAATTTATTTTGAGTAAGTTCTTGATTAATC AAGGATAAATTAGCTCTTTACAAATGATAAGTAGTTATTTATTGTGTAAAAAAGATAATTGTGTTAGTTATTTATGACAT TGACAATGATGTAACTACCTTATTAATAATGCTCATTGTTTTCACTAACAAGTCGATTGATTGCTTCGGTTTGGCCAT
CDS sequence (LotjaGi5g1v0095000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTGTCATCTCGAAAATCTTAGGCAGGACAAAGTAAAAGAGAAAATGGTGGTGACGGGTTCCGAGATGAACTCCCA AGGAGGTGACGGGGTGTCGAATCAGCAAGAAGCAAACAAGAACCATTCATCATTCTCATCGCTGGGAAGACAATCGTCCT CAATCTACTCCCTCACGCTCGATGAATTCCAGCACACACTCTGCGAACCGGGCAGGAATTTCGGCTCTATGAACATGGAC GAGTTCATCAACAGCATTTGGAGCGCAGAAGAAAACCAAGCCACCAACAACAACAACCCTAACCAAAACAACAACAACAT CAACAACAACAACAACTTGTCTCTGAGCGAAACCTCGACGGAGAAATTAGGCTTCATAAGGAAGCAGCCAAGCCTCCCTC GACATGGTTCTTTAACAATCCCTGCACCTCTTTGTAGGAAAACAGTGGATGAGGTTTGGTCTGAGATTCACAAAGGGCAG CAATCTCAGCAGCAGAACAACAACAACAACAACGGTCAGAATACCGAGTCTGTCCCTCGCCAACCTACTTTTGGAGAGAT GACTCTGGAGGATTTTCTAGTCAAGGCCGGGGTAGTTCGGGAACAAGGTGCAAATTCAAATGCAATGCCTCTCCAGGTTC CTTCTTCACAACACCAGTTGCTGCAGCAGCAGTTTGGAATGTACCCAAATGTGGGGCCCTCATTTAGGCCCACGATGGCG ATTGGTGCTGGCGGTTGGGGAGGGAATGCAATTGCGGTCGCGGTTGCGCCACCTTATCCAGTTGTGGCTCACAGTGGCAG TGGTGGTGCAATTGTGGAGAGTAAAAGAGATGGTGGGTATTCGGTGCCAGGGGTTGGTTATGGAGGGCAGGTGATGAATG GAGGTGGTGGAGGGTATGGGGGTAATATGGGAATTGGCGCGCCGGTGAGCCCAGTTTCGCCAGACGGGATGGGTGGAGGT GAGAACAGTGGTGGTCAATTTGGGATGGAGATGGGTGTGTTGAGGGGACGAAAAAGGGGTTTGGATGGTCCTGTGGAGAA GGTGGTGGAGAGGAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCAGCCAGATCAAGAGCAAGAAAACAGGCATACA CAATTGAATTGGAAGCAGAATTGAATCAATTAAAAGAAGAGAATGCACAGCTGAAACTAGCTCTGGCCGAGCTTGAGAGG AGAAGAAAGCAACAGTATTTAGAGGAAACGAATGGGATGGTTCAAACCAACGCTCAGAAGACCAAGAAGAAACTAAGTTC ATTGAGAAGGACTCTAAGTTGCCCTTTTTGA
Protein sequence (LotjaGi5g1v0095000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVCHLENLRQDKVKEKMVVTGSEMNSQGGDGVSNQQEANKNHSSFSSLGRQSSSIYSLTLDEFQHTLCEPGRNFGSMNMD EFINSIWSAEENQATNNNNPNQNNNNINNNNNLSLSETSTEKLGFIRKQPSLPRHGSLTIPAPLCRKTVDEVWSEIHKGQ QSQQQNNNNNNGQNTESVPRQPTFGEMTLEDFLVKAGVVREQGANSNAMPLQVPSSQHQLLQQQFGMYPNVGPSFRPTMA IGAGGWGGNAIAVAVAPPYPVVAHSGSGGAIVESKRDGGYSVPGVGYGGQVMNGGGGGYGGNMGIGAPVSPVSPDGMGGG ENSGGQFGMEMGVLRGRKRGLDGPVEKVVERRQRRMIKNRESAARSRARKQAYTIELEAELNQLKEENAQLKLALAELER RRKQQYLEETNGMVQTNAQKTKKKLSSLRRTLSCPF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 435 | 419 | 3.5E-152 | ||
| PANTHER | 17 | 435 | 419 | 3.5E-152 | ||
| MobiDBLite | 22 | 48 | 27 | - | – | |
| MobiDBLite | 93 | 115 | 23 | - | – | |
| MobiDBLite | 155 | 181 | 27 | - | – | |
| SMART | 347 | 411 | 65 | 1.8E-12 | ||
| ProSiteProfiles | 349 | 401 | 53 | 11.542 | ||
| CDD | 351 | 405 | 55 | 7.72979E-25 | – | |
| SUPERFAMILY | 351 | 401 | 51 | 6.0E-10 | – | |
| Pfam | 351 | 402 | 52 | 7.2E-11 | ||
| Gene3D | 351 | 400 | 50 | 6.5E-15 | – | |
| ProSitePatterns | 354 | 369 | 16 | - | ||
| Coils | 367 | 408 | 42 | - | – | |
| MobiDBLite | 417 | 436 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Response to abscisic acid | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus. | ||
| Biological process | Positive regulation of transcription, DNA-templated | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi5g1v0095000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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