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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0132800 |
| Transcript ID | LotjaGi5g1v0132800.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome c1, heme protein, mitochondrial; TAIR: AT5G40810.1 Cytochrome C1 family; Swiss-Prot: sp|P25076|CY11_SOLTU Cytochrome c1-1, heme protein, mitochondrial; TrEMBL-Plants: tr|I3S7F6|I3S7F6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0132800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:31105027..31109356) extracted from Lotus japonicus Gifu genome v1.2.
CTGAGTGGTACAGTGGACGTACATACCTGTTCATGCCAAAAAAAATTGAGGAGTTTATAACAGCTTGTGTTCCATGGAAT AGTTGTGTCTTTCCCTAACAGCTGCTATATAATTATTGCAGAATCCTTCTTCTATGTCATCCATTGTCACAAAGAACAAT GATGCTGGCTCAACTGGCAGCAGCTCCATAAGAGCCCTCGCATTAATTGGAGCTGTTGTCTCAGGGTTTTTGGGTTTCGC GACAACAGCATCAGCTGATGAAGCTGAGCATGGCCTGTCATGTCCAAGCTATCCATGGCCTCACGAGGGCATCCTCAGTT CATATGACCATGCTTCGTGAGTCTAACCTGAATTTTCCCTATATTTTCCTTTTTTACTTTTTGCCCCACAGAATCATTTG CCATGTTAGGGCCTATGTGCACTAAAACTGTTCTCTGTTGCATTTTAAAGGCAAATTAGAGCCAGTTAATTATAATTACA TGTTTATAATTATTCCTTAGGCTAATGTTTGGATTGATGGAACATAATGGAATGAAACAGAATGAAATATAATGGAATAG AGTGGAATGAGATGAAATGGAATAGAAATCTCGTTTCATTCCTTTGATATTTTATGATGGAACGTAACAAATTTACCACT CCATTATTTTGATAATGGATGTAGATGAAACACAATGGATTGTAACTGTTAGAAATCCTAAGTTAGAACCACACAACACC ACAAAACCTTAGGCTTAAGGCAATGGGTGTGTGTGTTCTTTATTATATATGCACTTGTGCACTTGCTAATCTTGGCAATG TGGGACTTCTTTGAGTCACCACTTTATTATCTCTATTACTCCCCCTCAATTGGGACTCCATCATTTTTTTTTTTTGCCTG TGCCTTGCACTCCAGCGGGAACATCAGTGGTCGTCGGACTTGTGCTCCTTCGTCTGAGTCTGCCTTTCGACTTTCTTTGT CTGGGCTAGTACTCTAGCGGGAACATCGGAGTTCCTTGGACTTGTGCTCCTTCATCTGAGTCTGAGGTCTTGGCTTGCGC AAATGGGACTGCCATTTTTGCTTTTTTTTTTCAATCTTTTTTTTTTACTTTTTTTTTCGGATTTTTTTTTTACGTTTTTT TTTTTTTTGAAGCGGAAGTCATAGCTTGGATCAGACCAGCTCTGATGGTGACTCAAAGAAGTCCCACATTGCCAAGATTA GCAAGTGCACAAGTGCATATATAATAAAGAACACACACACCCATTGCCTTAAGCCTAAGGTTTTGTGGTATTGTGTGGTT CTAACTTAGGATTTCTAACATGGTATCAGAGCCAATGGTTGTTTGACCATGGGTCTGGGCCCCTATCCTAGATCCATTTG TTGTGGAGACCTCCCATATTTGGGCCACCAGTTTCATTCCACGCTCCAGATGTTCTACACTGGGCGTGAGGGGGTGTGTT AGAGTCCCACATTGGCTAGAGATGTGGCCAATCAATTGCTTATATATGGTTGTGCAAACCTTAACTCTTGAGCTAGCTTT TGTGGTTAAGTTAGGCCTCCTTCAGTAACTTATTCATTCCTTCATTACACTTACTTTAAAAGCACTAATATTTATGTGAT AAACATTTCTATTTTCCTGCATTTTACCTTTACTTGATATTATACTATTAAATCTCGTATCTATGTAATCAAATATTTAA ACTTAATATAAATTCATAAAAATTTAATCTGAAAAATATATTTTTCCATGACATATTTTGAAAAAATTAATTTTAAGCTA AACTAAAATGTCACAGCTGAGAAAAATTGTCTAATCAATGATGACATCAAGTTTGGTGGTTATTTTGTTTTGGTAATTGT TTGCCTTATATGAATTTTGTAATTTTAACGTGAAGTATTTGGTTCGAAGTATATTTTCTTTTTTCCTTTACCTTCTATAT TTAGATTTTTTAATGTGGATCTTATCTTCTAATTCATTTATTTTTTTTTTAAATTACCTTACAACATACAAGAAGTTGAC ACGTAAAAATAAAAAGTTGTTTGTTACAGAAGCAGAACTAACCACTTTCGAAAATAAACATTAAAATATATTAATAATAA AAATATTTACTATGACACATCCTTGTATAAAGTTTAAATCGATGCAACGAAAAATAAAAAAAATAAAAAATAAAAATATT AGGAAATATTTTAAAAAATTATATACAAACATTGTAATATATGTTTTTATGGCTAGCTCGTTTATATAAACAGTTACGCC TCTGGTCTGGTTGACTAGTAATATTTACATTTATTATTTTTATTATTATTATTATTATATAAAAAGATAATAATTAAATA AAACTGCATCATATAAAAATAGAGGGAGGGTAAAATATCATGTATAACAATACGTAACAATGGCCTATGTATAGCGTATG AGAAGAAAGTTAGAAAATATTTGAATATATAATATAGGTAAGGTTAGAAAACTAAGTCAAGGTTTTTGTAGTGATAAGCG TTTCCATTCCATCATATTCCATCCAAAATGGTGGCAAGTAAATTGATGGTAAGTAATGAAATGTTGTACCGTCCATTCTG TTACATCCTCATGTAACAAAAGCAAACTCTGGATCATAATAACATTTCATTCCCCTCCACCACCTTCCCATCAATCCAAA CATGACCTTATTTTGATTTTCATTTTCATCTCAGGGCTTTCTCCTGAGCCAGCCCAGAACTCATAATAGAAGTATTATAT TGTGGTGAATATGTATTATTCTCTTACTGCTCTATACTACTGTCATATTCAAATCGAATTTCACATATATCATAATTATT ACTGATTACATTCTCAATGCATTCATCTAATTCTTCATGAGTAGGATTCGTCGTGGACATCAAGTTTATCAACAAGTTTG TGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTCGGTGTTGCTTATACTGAAGAAGAGGTAAAGGCTA TGGCTGCGGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGC CTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTAC CAAAGTAATGTCAGTTGTCTGCTAGTAACTTTGATTTTCTATTGTATGTATACCAAAATGTCGTTACCTTTTGTATTTTC AGGCTCGGCACAATGGTCAGAACTATGTGTTTGCCCTTCTAACCGGTTATCGTGATCCCCCTTCCGGTGTTTCGGTAAAT TTTTCTCTAAACATCATTTGTAAAACTACACTCTACTTATCAACCGAACTTTGTGCATTGTGCAGAAGTTGTGATATGAA AGTTGCTAGACCACTTGATGGGTGATTCAGATGATGGGTAGTCGAATAGTTATGTGTAGGGAGGGACCAAGAAAAATTAT AGGTTCAACCTTTAAGAAGCATTTAGAATTTAATATTATTATAAATGATTCATAAAGAACATTATGAAGCCAGTTGATTC ATATTGCCAACCCCACAAAATGAAAAAAGGCTAGGTTTTTTGTTTCTACTTACATGTACTAAATATTTAGAATTTACAAG AATTCCAACCTGATGAGAAAAGGCTAGGTTTGTGGTTTTAACTTAGCATGTAAATCAAGTTATCAGCCTTGCTTGTCTAT AGATATTTACTATGAGTAATGAAGTTCATTATACGTTCTTAACTTTCTAATTCTCGTAAATTCTAAATATTTAGTCCAAG TTCCTCGTTATTCTGTCCCCAAATCAGTGTGTGAATACTGTGCTTAAAGTAAATTTTGTTGATGATTATCTTTTAAATAA TAATGTAGATTAGAGAAGGACTGCACTATAATCCTTATTTTCCTGGCGGGGCCATTGCTATGCCTAAAATGCTTAATGAT GGTGCTGTTGAGTATGAAGATGGTACCCCTGCTACAGAATCTCAGGTACTTCTATTTGTTGCCGATTGATTTCAGTGAAT CTTATATCGATGAACTTGGGAAAAATGAAGCAATACTTTTTCTCCTATTATGTTTTGTTGCAGATGGGGAAAGATGTTGT GTCATTTCTGTCTTGGGCTGCCGAACCTGAGATGGAAGAGAGAAAACTGGTTTGTTTCCTTTAATTCCTTTTTTTCTACC TGAGCAAATGAAGGAAGTGTTTTATTTTCTAAGGATATTGCGACTGAATGCAGATGGGATTTAAATGGATATTTGTACTA TCACTAGCATTACTTCAAGCTGCCTATTACCGCCGCCTTCGGTGGTCTGTTCTAAAGTCTCGCAAGCTGGTTCTTAATGT TGTCAATTAG
CDS sequence (LotjaGi5g1v0132800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAAAAAAATTGAGGAGTTTATAACAAATCCTTCTTCTATGTCATCCATTGTCACAAAGAACAATGATGCTGGCTC AACTGGCAGCAGCTCCATAAGAGCCCTCGCATTAATTGGAGCTGTTGTCTCAGGGTTTTTGGGTTTCGCGACAACAGCAT CAGCTGATGAAGCTGAGCATGGCCTGTCATGTCCAAGCTATCCATGGCCTCACGAGGGCATCCTCAGTTCATATGACCAT GCTTCGATTCGTCGTGGACATCAAGTTTATCAACAAGTTTGTGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGA TTTGGTCGGTGTTGCTTATACTGAAGAAGAGGTAAAGGCTATGGCTGCGGAGATTGAGGTGGTTGATGGCCCTAATGATG AGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCCTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTT GCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTACCAAAGCTCGGCACAATGGTCAGAACTATGTGTTTGCCCT TCTAACCGGTTATCGTGATCCCCCTTCCGGTGTTTCGATTAGAGAAGGACTGCACTATAATCCTTATTTTCCTGGCGGGG CCATTGCTATGCCTAAAATGCTTAATGATGGTGCTGTTGAGTATGAAGATGGTACCCCTGCTACAGAATCTCAGATGGGG AAAGATGTTGTGTCATTTCTGTCTTGGGCTGCCGAACCTGAGATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATT TGTACTATCACTAGCATTACTTCAAGCTGCCTATTACCGCCGCCTTCGGTGGTCTGTTCTAAAGTCTCGCAAGCTGGTTC TTAATGTTGTCAATTAG
Protein sequence (LotjaGi5g1v0132800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPKKIEEFITNPSSMSSIVTKNNDAGSTGSSSIRALALIGAVVSGFLGFATTASADEAEHGLSCPSYPWPHEGILSSYDH ASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRLPQPYANEAAARF ANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPSGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMG KDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLNVVN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 55 | 55 | - | – | |
| Phobius | 1 | 261 | 261 | - | – | |
| PANTHER | 14 | 298 | 285 | 1.0E-190 | – | |
| PANTHER | 14 | 298 | 285 | 1.0E-190 | ||
| Gene3D | 58 | 253 | 196 | 4.5E-91 | ||
| SUPERFAMILY | 62 | 252 | 191 | 1.06E-72 | ||
| PRINTS | 67 | 86 | 20 | 4.1E-78 | ||
| Pfam | 69 | 285 | 217 | 2.4E-97 | ||
| ProSiteProfiles | 81 | 188 | 108 | 7.443 | ||
| PRINTS | 87 | 106 | 20 | 4.1E-78 | ||
| PRINTS | 132 | 152 | 21 | 4.1E-78 | ||
| PRINTS | 165 | 189 | 25 | 4.1E-78 | ||
| PRINTS | 203 | 214 | 12 | 4.1E-78 | ||
| PRINTS | 214 | 233 | 20 | 4.1E-78 | ||
| PRINTS | 234 | 253 | 20 | 4.1E-78 | ||
| PRINTS | 253 | 268 | 16 | 4.1E-78 | ||
| SUPERFAMILY | 253 | 297 | 45 | 2.09E-13 | ||
| Gene3D | 254 | 295 | 42 | 3.0E-11 | – | |
| Phobius | 262 | 279 | 18 | - | – | |
| Phobius | 280 | 298 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
Expression pattern of LotjaGi5g1v0132800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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