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LotjaGi5g1v0222400.2

Overview

Field Value
Gene ID LotjaGi5g1v0222400
Transcript ID LotjaGi5g1v0222400.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Acyl-CoA-binding domain-containing protein 4; TAIR: AT3G05420.2 acyl-CoA binding protein 4; Swiss-Prot: sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4; TrEMBL-Plants: tr|A0A0B2QFE8|A0A0B2QFE8_GLYSO Acyl-CoA-binding domain-containing protein 4; Found in the gene: LotjaGi5g1v0222400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:52930666..52938729) extracted from Lotus japonicus Gifu genome v1.2.

GAGATGGCAGCGATGGCGAGAGCAAGTTCTGGTCTGCAATACCCAGAGCGGTTCTACGCCGCGGCCTCATACGCAGGATT CGACGGATCCGCCTCTCCCACCAAATCCCTCACCTCCAAGTTCGGCAACTCCTCCGCTCTTCTTCTCTACAGCTTGTACC ATCAGGTTCCCTTTCGATCCCAATTGCATCTCTCAATTTTCAACATTGCCACCTTAGATCTGGTGTTTTAGGATTGCATG ATTGCAAACCATAGTTTTATAGAATTTCTACTACGTGTCTATTAGATCAACTGTAATTCTAATGAAATGCTCATAATTAA GCATAATTCGCATTCAAATTTTCAACAATGAGGATTGGAATGTTGATTTGCTGTGTTGATGATCGATCCCAGCTTCAATT TCAGCTTCCGCGTGTCGAAATCGATTTTTGTTGCATTGTCAGATGTGTTGAAGAAATGATTTATCTAGGGGATCAATCAC ATATACATTTAATGCTTAGTTTTTTTATGGCAGGCTAGTATAGGACCTTGTAACATCCCAGAACCCAGTTCATGGAAACT TGTGGAGCATAGCAAATGGGCCAGGTTTGTATGCTTTCAACATTCCCTTTGCTTTCTCGTTGCGGTTTATATACAGTCTC CCGGATTCGTTCGCTCTATTTATGCATGCATTTGGCGTGATTCTGATTTTACTTTGCTTCTTCATTATGTATATTTTATG CAAACATTTTTTTAGTCAATGTAGTTTTTGCAATTTACACTATTGCATCCCTGCTTTCATTTGTTGAGGATATTATTGAA AAGTAGTTGTTGTTGATGCAGCTGGAACCAGCTCGGAAACATGTCCTCCACAGAAGCCATGCGTCTTTTTGTGAAAATAT TGGAGGTGATGCAAATAATATTTTTTTCCTCCATTTTTCTTTTGTATAATGCTGAATAGTAGCTGATTACTTTTGTTTTT ATTTTCCATTGTTGTGCAGGAAGAAGATCCTGGTTGGTATTCCAGAGCATCTAACTCTGTTGCAGACCCTGTTATTGATG TGCAAATGAATGTGAGTATCAGGAAGGCTATGTATTTATTATATATAATATAATGCTGAATCCTTATCTTGGTTTGGCAT TTTATCCTGACGGTATACTTAGTTTTCATTTATACTTCTGCCAATGACCTGTTATGAGCTTTACACGATATATTCATCTA TCTATTTCATCAGAGTTGCTTTAGAATAGAAGTACTGAAAGATTAGGAAATAGTCTGGTTCCTCTCTAAACAAGTAAGAA AACCTGTTTGAAGATAAAAATTCAAGAACCTGGGCATATGCTGTGTTCTTGCAACTTTCTTGCACCAGGCATGCATCCAA TTCTCATGCAACCAAGAACAAGTTCAATGACTTCGCTGTTAAGCCCTGTGCTGAATTATTTATAAGCCATCTAGGATTTG ATCTTTAGATTTAAATTAATGTAAGAGACTTGTCACTGCAAAGTTGAATAAAGAGAAGTGCAATGAGAACATCATGTTTT TCTCCACTTCTGCTGCTACTGTTAACATTGTTATTTCTCCTCCTTCATCCTGTCTTGATTATCTCACAGCACAATTCCAA AGTTGAACCAATAATCGAGAATGGGAACTCATATCCAGAGATAAAGACCATTTCCACTGAAAATGGAAGTCAAGTTGCAA CCCAGGATAAAGATGTTGTTATTGAAGGCTTTGGTTCAGTTGAAGTCTATGATCAATGGATTGCACCTCCAGTGTCTGGT CAACTTCCAAAAGCCAGATATGAGGTAGGAATATAAAATTCATTTATTTCACTAATTTTTACTTTTTCTTCTGTGTTAAT TTATTCTTATTCTTGAGCTACTGTTTTTTTTTAATATGTTCAGCATGGAGCTGTAGTCATGCAAGACAAATTATACATAT ATGGTGGAAACCACAATGGCCGTTACCTTAATGATCTTCATGTAAGCATATGCTCAATATCTCTGTTTCATGAATCTAAG CATTTTGGCTAAGCACTAATATATCTTGTGAGGTTGATTGAAACCGCCAAGTTTGGTTTAAGTAATGGTTTATCACATGG TTTAACTGCTAAACTTTTCTTAATCTCGCCCTTGAGCTGACTACACTATATGCTATCTACTTTGAATTACATGGAAACGA TACAGGTTCTCGATTTGAGAAGTTGGACTTGGTCGAAGATTGAGGCTAAGGTTGTAGATGAGTCTACTGACTCGTCATTC TCAGTAACATTAACCCCTTGTGCTGGCCATACACTGGTTTGTATTGAAAATGATTCTCTCAATTGAAAAACCCTACATAA CCTTATCTGCTATATTCAATGTGTTGTTTCTTTGTTTCTAGTACTAATTCTGGAATACTTTGGATTTTGACCATTGAAAC TTTGTCACTGTAGATTCCATGGCAAAATAAGCTTCTGTCAATTGCTGGGCATACCAAAAATCCTGACGAAAGTATTAAAG GTATACAATAATAGTTAATATATCTTATCATTATGTTAGGCGTTGGCACCATATCTGTGCAAAACTTAAAACACGCTCAT TTAGATGAATTTCAGAAAAGAAGCTTTAAGAATTTTGATGGTTATTTCACCTCCAAGATAAAACTAAAAAACATGATACT ATTACTACATTCACCTTAAAGTGGATAAGTGTGAAGAGTGATGAAATTTTAGTGTACATACTTAAGTGAAACATTTATGT GACAAATCTTGTTTGTATATTCTCGTTGAATGATGGACACTTATGAATTTTTGCTTCATTGGTTCAATCTAAGCCATCAC TTTTTTCGGTCTTTTATTGCCGTTATCTTTTCTATATTTACATTTAAGCATCCATTTTTTTATATTATTACATACTAATT AATATTATGACAGTGAAAGTGTTTGATCCAAAAGTGGCAACTTGGTCGACTCTAAAGACTTACGGGAAACCCCCGGTATG TATCTATTTATCTTCCTTTTGTGTAACCCAAAAATCTTAGAAAACTTTTGAATTTTGTGTAGCATGTGACATGTATGTTT TTCGCTTACTACCTAACAAGAAATGCATAAATTTAGTGGTTTTTGATATATGGTACGCACATTTAATAAACTTCTAAGTT GCTTTTTGTTTCATCTATGGTTTTTAGGTATCACGTGGAGGCCAATCAGTCACCTTAGTTGGGAATGGCTTAGTAATTTT TGGTGGACAAGATGCAAAGAGAACTCTCTTGAATGATTTGCATATTCTTGACTTGGAATCCATGACTTGGGATGAAATCG ATGCTGTGTAAGAAGTTTCCTGAAGTAACTCGTTCTATCTTACTAGTTTTCTAAAAGAAATGGAAAGGGCAACTTGCATG GCAAGTTTCAGGGAATCGTGGGTTGATTATAGGCAGTTGAACCTTGCATTTGCAAGAAGCTAATTCCTCACTGGTTTCTA TTTTACCTTTTTTTTTGGGGTGGATATGGATGTTTTAATTTATATGCTTGTAAATTTTATTATCTTTAGGGTGTATAAAA AACATTGAAACTATTGAGAGGTCCCACATTGACTAGAAATAAGGCCATTAAGTTCTTATAAATGGTAGAGAAAGCCTCAC CCTTTAGCTAGCTTTTGGGGTAGAGTTGGGCCTAACTCAACTTCAATATGATATTAGAGCCCATCATAGATATGTATATT GAGCCACTCTTAAATGGGCTACCTGCCATGTGCAAATGTCCAGTTCTTAAAGTTTAACGCTCTAGATGTCTAGCCCTGGG CGTGAGGGGGTGTTAAGAGGTCTCACATTAACTAGAGATAAGGCCAATTAAGTCCTTATAAAGGGTAGAACAATCATCAC ATTGAGCTAGCTATTGGGCTAGAGTTAAGTCTAACCCAAAATCCCAAATTCAATAGAAACAAAATGCATTTTGACTTTGT TCTGCAACCATCTTCTGCACGTATGCCAAAATCTGGTTTTCATACATGGTAATTATGTTATTTTCATCAGTAGTGATTAG TGAATGCTATTCTTGATTTTCCTGTTCCAATATAGAGGGAAAAAATGATAAAGGAAACATGTTATTGTTTGATGCTAAAG AAGTCTCAATTGGCAGTGGGGTTCCTCCTTCTCCGAGGTCTGATCATGCTGCTGCTGTACACGTGGAGCGATACTTACTT ATCTTTGGTGGGGGTTCACATGCGACTTGCTATAATGATTTGCATGTTCTCGATTTGCAGACTGTAAGACCATTGCCTTT CCTATTAAGTTAAGGACTTGAAAGATCATCATCTAATAATGATCTATGTGAACTATGCAGATGGAATGGTCTAGACCAAC ACAACTGGGTGAAATACCAACAGCACGTGCGGGACATGCTGGTGTGACAGTAGGGGAGAACTGGTTCATTGTTGGTGGGG GTGACAATAAGAGTGGTATGGCTTGTCGTCACCTGGTCACTTACATTTACTAAAATGCTGTATAAACCAATGTCACCACC ATTGCATTCTGATAAAAAATTAGCATGTTACCCGTATATTCCTCCCCTTACGAATACATTATAGAGACTTAAGAGTAAAT TCAAACAAGCTATATTCCTATGAGATGCCTTGCTTGTTGTGTTTCCTTTAATTCCTTAGTTTCTCTGTGGTTTTGGATAT TTAATTCATAGATGAAGGAGGTTAACTGTCACTGTTTTCTGCCTTGATCCTTATAACAGATATGAAGTTGAAGTAACTAG TAAAAATTATGGTTTTAGAAAGGGGCAGTAAAAGTTATAAAGGACTAATCTATAAAGCATTTCTGAGTTGATATGATAAT ATAAGCTCTTTTTTTTTTTTGAAGAATACCATTCTTGGTAAAAGAAAGTTTACAAGGAAAAACATTACTGTTTTATTGGG ATCATTGTGAAGTGCAACTTCTGGTGTAGTTATTATACATCTCAATGGCTTCATCACCTAGTTTTGCACTGGTTGCAAAT TTATTAATGATTTTAGATTTGAGGACATTTCCAGTGCTGTCTCACTGTTGTTATATATGCCTTGCTTCTATTTTTATATT CCATATTATTCTGCAGGGGTTTCAGAGACTGTTGTGTTGAATATGTCTACGCTGACATGGTCAGTGGTTACCTCTGTTCA AGGCCGTGTACCTGTTGCTAGTGAGGTACTTTTAATATGCAGAGGCCTATTATCATGGGAAAATTTCAATTATTGAACCC TTGTTAAAAATATTAACCATATAGGAAAAATAACCACTTGAAGTGGTTATTATTTATAATATATTGGTGTTCCCTCTTTT ATTATTGTATTTTTTCAGGTTTGCATACAAATTTTAACCATACTGTCATATGGGGAAGATACCCAGACCTTTCACATAGT TTTCTAGTGCCATTTCCTTAAGATATTAAAATGTTTCTCACTGCAGGGCTTGAGTTTGGTTGTAAGCTCATATGATGGTG GAGACCTACTTGTATCATTTGGAGGATATAATGGACGTTACAACAACGAGGTGAAGATTATTTCAAAATCTCAGGCGTTT CCCTTTTCTGCTTTCTTTTGCTTTTGTTGGATAGTTCTCCCTCCCCTCATGTAGGTTGCTGCATTCAGGTCTATGTCCTT AAACCAAGCCATAAATCAACCTTGCAATCAAATACATCTGAAAATCCTATACCAGACAGTGTTTCTGCTGTTCACAATGC CACAAATGCTACTCGAGATGCGGAGTCTGAATTTGAAGCAGGCCATGAAAGCAAAATTAAGGAACTTGTCGTGGACAATG GTGATTCAAGAGTATGTATTATTGCAAAGCTCGACCTTTTTCACTTTGACCAACATTGACCAACTCATGTGGCCTATGTC ATTGGTCCATTTAGTGACATTTCACTTATTGCTGATTCTAGGACTGAAGTAAGGATAATAATGAAAAATTGTTTGGAAGC TCATAATAAACTGACAGATACATCATGCATGCATTCATAGATATTGGAGACCTATTTCACTCATCCAAAATTGCAAATAC ACTCTGGATCATTCAAGTTATAGGCATAATCGCATCCTACATTTGGTGCATTTCATTTTATTAATACCTGCCATTCACCA CTTTCAAATTTTGATTTTTGGGTATCTTACAGAAATTGAAAGGCGATGTTATATCAGTCCTGAGGGCTGAGAAAGATGAA TTGGAATCATCACTCAGCAAGGAGAAGTTGCATACTCTTCAACTAAAGCAAGAGCTTGGAGAAGCTGAAGGACGTAATTC TGACCTTTGCAAGGTAACTACTTTAGTAGTTGATTCCTTCTCATTTCTGAAACAGTTGAAAGTTGACAGGAGATTTTGTG TTATCAGTACATATTGAACAGTGCTTAGGTAGAATATTCGTAAATGATGCTGTGAAAATCAAATAATTTCTCTATGCTGT GTCAATTCCCCTATTTAATTTCGTGCTAAGAAAGGATTAAGTAATTTGGACAGGTGATTGTTGGTGAAAAGCGCTCTAAT ACCATAATCAGAAATATGAGCCCAACACTATATAAGAACAAAATAGGAACATTATCTGATGTTCTTAAATGCTATTAAGA AAGGATTAAGTAATTTTGAGGGGTGGTTGATGATGAAAAGTGCTTCTGATACAATATTAATAAATATTAGCTCAAAAATA TATAAAATGACAACATGAATATTATTTGTTGTTCTTCAATGCTATAACGGTCTTCATTGTTATCGCACTGATAATGCAGG AACTTCAATCAGTACGTGGTCAGCTTGCTGCTGAGCAGTCAAGGTGTTTCAAACTTGAGGTAAACATTAATTCTTCTGAC AGCCTTCCTCTCTGGGTTTGTCAATAAAGTGTTTTTGAACACATACTATCATGACATTGAAAAGTAAGGACAGACACTCA GACAGTGTCTAAAACGTGTGCCCTGATCTCTCCAGTTGACCCAACTCAAAATATGATTCAGACCCTGTCTGGTTACACCC CCAATATGTATTTTGGGGCACTTTTCCTTTCACGAAAAGTAATTTGGTTGCTATAAATTGTTTGGGTACAATTTACATTT GTGGTGGGTACTGGGTAGAATAACTTTTGGGAGAAATGAGATTTTTTCACTTTTCCCGTGAAAATAATTCATTTTAGGTG TGAGATCCACAAAATATAACTTTAGTATTTATATTTAAAGTAATTTTATCTTACCATCGAGATAAAAATTATTCTTTTAA ACATTTTTACCCTATGATTTCCAAACACAAGTCATTCAACCAAATAGCATTATTTCAAAAATTATCTTTATATTAATTCT AACAAAAGCTATTCTACTCAATTTTAAAATAAACAGGTCTGTTTTGTTAGAGGCAAAAGTCTGGAAGAAATCACAGAACA TATGTTGCCTAAACAAAAAAGTAGAGTGGTTTTGAAATTATAGTTAATCGCTTGGAGTGAATTGTTGACTCTCTAGTTCT ACTTACCTACAGTTGAGAATTGCAAAGTCAGACAATTATCAACTGTAGGCAATGGAATGAAGTGATACATATTTCATCAC TGATGTTGTGAGTGTGTGTGTGTGGCTAATGTAGCTGACTGAAGAAAAGTTATTAGGGAAACATAGTGCACCACATCATG AACTAAGCTGTTCATAGTGAATTTCAAAATTTTCCATTATTTGCATAAAAAGTGCTTATTTAATATCTTCTAATCGCACA AAATACGAATTATTCTATGGTCATTTTGGTGTAAGGGTGACATAATGAACCATATTTTCCTTTTAGAGAAATCATTCTAA TAAGATCCCTGTTTGTTATGTTTTGTCTGAGTCTGCTTCAAAAGTTTGGCATTTGTCTCTTCATATTATGGATAAAGAAT TTGAAATTTGCTTACTGAAGAGAATATTTGGATCATAGGTGGAAGTTGCTGAGTTAGGACAGAAACTCCAAACAATTGGG ACATTACAGAAGGAACTTGAACTCCTCCAACGGCAAAAAGCTGCATCTGAGCAGGCCGCCTTAAGTGCAAAACAAAGGCA AGGTTCAGGCGGTGTATGGGGTTGGCTTGCCGGTACTCCCCCTAACCAGCAAGAGGAAGATTGA 

CDS sequence (LotjaGi5g1v0222400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCCTCCACAGAAGCCATGCGTCTTTTTGTGAAAATATTGGAGGAAGAAGATCCTGGTTGGTATTCCAGAGCATCTAA CTCTGTTGCAGACCCTGTTATTGATGTGCAAATGAATCACAATTCCAAAGTTGAACCAATAATCGAGAATGGGAACTCAT ATCCAGAGATAAAGACCATTTCCACTGAAAATGGAAGTCAAGTTGCAACCCAGGATAAAGATGTTGTTATTGAAGGCTTT GGTTCAGTTGAAGTCTATGATCAATGGATTGCACCTCCAGTGTCTGGTCAACTTCCAAAAGCCAGATATGAGCATGGAGC TGTAGTCATGCAAGACAAATTATACATATATGGTGGAAACCACAATGGCCGTTACCTTAATGATCTTCATGTTCTCGATT TGAGAAGTTGGACTTGGTCGAAGATTGAGGCTAAGGTTGTAGATGAGTCTACTGACTCGTCATTCTCAGTAACATTAACC CCTTGTGCTGGCCATACACTGATTCCATGGCAAAATAAGCTTCTGTCAATTGCTGGGCATACCAAAAATCCTGACGAAAG TATTAAAGTGAAAGTGTTTGATCCAAAAGTGGCAACTTGGTCGACTCTAAAGACTTACGGGAAACCCCCGGTATCACGTG GAGGCCAATCAGTCACCTTAGTTGGGAATGGCTTAGTAATTTTTGGTGGACAAGATGCAAAGAGAACTCTCTTGAATGAT TTGCATATTCTTGACTTGGAATCCATGACTTGGGATGAAATCGATGCTGTTGGGGTTCCTCCTTCTCCGAGGTCTGATCA TGCTGCTGCTGTACACGTGGAGCGATACTTACTTATCTTTGGTGGGGGTTCACATGCGACTTGCTATAATGATTTGCATG TTCTCGATTTGCAGACTATGGAATGGTCTAGACCAACACAACTGGGTGAAATACCAACAGCACGTGCGGGACATGCTGGT GTGACAGTAGGGGAGAACTGGTTCATTGTTGGTGGGGGTGACAATAAGAGTGGGGTTTCAGAGACTGTTGTGTTGAATAT GTCTACGCTGACATGGTCAGTGGTTACCTCTGTTCAAGGCCGTGTACCTGTTGCTAGTGAGGGCTTGAGTTTGGTTGTAA GCTCATATGATGGTGGAGACCTACTTGTATCATTTGGAGGATATAATGGACGTTACAACAACGAGGTCTATGTCCTTAAA CCAAGCCATAAATCAACCTTGCAATCAAATACATCTGAAAATCCTATACCAGACAGTGTTTCTGCTGTTCACAATGCCAC AAATGCTACTCGAGATGCGGAGTCTGAATTTGAAGCAGGCCATGAAAGCAAAATTAAGGAACTTGTCGTGGACAATGGTG ATTCAAGAAAATTGAAAGGCGATGTTATATCAGTCCTGAGGGCTGAGAAAGATGAATTGGAATCATCACTCAGCAAGGAG AAGTTGCATACTCTTCAACTAAAGCAAGAGCTTGGAGAAGCTGAAGGACGTAATTCTGACCTTTGCAAGGAACTTCAATC AGTACGTGGTCAGCTTGCTGCTGAGCAGTCAAGGTGTTTCAAACTTGAGGTGGAAGTTGCTGAGTTAGGACAGAAACTCC AAACAATTGGGACATTACAGAAGGAACTTGAACTCCTCCAACGGCAAAAAGCTGCATCTGAGCAGGCCGCCTTAAGTGCA AAACAAAGGCAAGGTTCAGGCGGTGTATGGGGTTGGCTTGCCGGTACTCCCCCTAACCAGCAAGAGGAAGATTGA 

Protein sequence (LotjaGi5g1v0222400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSSTEAMRLFVKILEEEDPGWYSRASNSVADPVIDVQMNHNSKVEPIIENGNSYPEIKTISTENGSQVATQDKDVVIEGF GSVEVYDQWIAPPVSGQLPKARYEHGAVVMQDKLYIYGGNHNGRYLNDLHVLDLRSWTWSKIEAKVVDESTDSSFSVTLT PCAGHTLIPWQNKLLSIAGHTKNPDESIKVKVFDPKVATWSTLKTYGKPPVSRGGQSVTLVGNGLVIFGGQDAKRTLLND LHILDLESMTWDEIDAVGVPPSPRSDHAAAVHVERYLLIFGGGSHATCYNDLHVLDLQTMEWSRPTQLGEIPTARAGHAG VTVGENWFIVGGGDNKSGVSETVVLNMSTLTWSVVTSVQGRVPVASEGLSLVVSSYDGGDLLVSFGGYNGRYNNEVYVLK PSHKSTLQSNTSENPIPDSVSAVHNATNATRDAESEFEAGHESKIKELVVDNGDSRKLKGDVISVLRAEKDELESSLSKE KLHTLQLKQELGEAEGRNSDLCKELQSVRGQLAAEQSRCFKLEVEVAELGQKLQTIGTLQKELELLQRQKAASEQAALSA KQRQGSGGVWGWLAGTPPNQQEED 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 579 579 0.0
ProSiteProfiles 1 23 23 13.2
PANTHER 1 579 579 0.0
Gene3D 61 306 246 5.4E-36
Pfam 101 142 42 2.8E-9
SUPERFAMILY 159 405 247 4.71E-44
Pfam 213 262 50 5.8E-8
Pfam 275 321 47 3.3E-11
Gene3D 307 423 117 1.6E-8
Coils 529 563 35 -
MobiDBLite 558 584 27 -
Coils 579 584 6 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Fatty-acyl-CoA binding Interacting selectively and non-covalently with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0222400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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