Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0246500 |
Transcript ID | LotjaGi5g1v0246500.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Lipase; TAIR: AT1G02660.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|P19515|LIP_RHIMI Lipase; TrEMBL-Plants: tr|I1JBH3|I1JBH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0246500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55500527..55504240) extracted from Lotus japonicus Gifu genome v1.2.
ACCAAACCAGTTCCATAACGTTCAAACCCAAAACACCATCGTTGTCAACAAACATTGTTGTCTTCTCCGCAAAACTAACC ATGGAAACCACCATGTGCTTCAACAATGGGATCGTTCCCTCGATCCCGATCGGCGGCTCTGTGGACGCACGCGCCAACCC TTCTCAGGTCAGCGCGATGGGGCGTTCAGCGGCGGAGAAACCGAAACCGCCGCAAAAGTCGTTGTTCTCGAGATTCTCGT TTAGGTATCCTTTAGAGTCTCTCTGGCCGCGGGGAGCTCGGGACGGCGGGTTTAGTGGGCTGGCCTTAGACGACGCTGTT TTGGTGGAGGACGGTGAAGAAGAGAAGGCTGAAAGAGATGATGAAAGGGAGGGTGGGAACTGGGTTTTGAAGATTTTGCA TGTGAAGTCGGTGTGGAAGAGGGAACAGGGGAACGGTGGTGATGAGGAGAATCAAGGAGAAGGTACAGCCAACGATCACA GGAATGAGGATGAGGAGGTGTGTTGTGATGGTTGCATGGTTGATCAAGATGATGACGAAAAAGAAGAAGAAGAAGAAGAA GAAGATGTTCAGTTTGATAGAGACTCGTTTTCCAGAATGTTACGGAGGGTGTCTTTGGCTGAAGCTAGATTGTATGCGCA GATGTCACACTTGGGGAGCTTGGCCTACTCTATTCCCAAAATCAAGGTATTGGATTGTGTTGAGTTTAAATCTTTCTTCA ATTTTAGCTTCTATTTGTGCTTTTAGACTCAAATCGGTTTTGCTAAATTGACATTCATAGGTTTCTGAGACTTTAGATCT ACCTTGTTGTAGACTGATCTGGGTGATTTGTTCTGAACATACATTGATTGCTTGCAGATTTATTGTGTCATAATTTGTTT GGTTTTTCTAGTTTATGAAGGGGATGATTTGGAATGCTTAAGTTTGTATCTTAAACATGTTATAAGCACCTGCACTTTCT GGGTTTAGGTTGTGTTGTTTATTTTGATAAACCCTTGGAAGGTTTTAGTTTGAACTTGATGAGGCAATGATCCTGTATGT TTGAATTTCTGTTGAACTCACACCGAGCTATGTTTGAGTCAACGTGTCAAAATCTTGCTTATCTCATGATACATTGAGAT GTGTGTTTTCCCATGGAAACGGGAAACCAAATGGGCACTTGCCTTACTTATCTAACTAAGACAAAATGGAATACTTTTTT ATTAGCTAGCTTAATTTGTAATAATTTTGGAATGCTCACCAGTTATGTGATCTATTTTTTATTGCTTGCATGTGATTCGA TTGCATTTTTGCATTTCTAATATGTATTTGTAAAGCTCTGTTTTCTATTTTTGGTTATATGATATTTCTGAAATGCATTG GCAAATCCTGGAAAATAATTTTCCACAAACGCATTGGAAGTACTGATTTATCTTTTGTCTTTGGCAATGTAGCCGGGGAA ACTCTTAAAACATTATGGTCTGCGTCTTGTAACTTCATCAATAGAGAAGAAGGAATTGGCTGCAGCAGCTGAAAAAACTC CTCAGGAAGGTGAAACTAATGAGAAGGCAGAAGATGAGAATGAAACAAAGGAGGCGAAGAACGGTGGATCCAAGATAAGT GCATCTGCTGCTTACAACATTGCTGCCTCTGCTGCATCTTATCTTCATGCTCAGACTAGGAGCATACTCCCATTCAAATC TTCAACTGCTGCGGATGGTAAAGGTTCCCCTGAAGGAAGCAATGAAAGCCTTAGTGGTGTTAACATGTTAAACACAGAGT TCGGATCTTTGATGGCAACTACTGATTCAGTGACAGCAGTGGTTGCAGCAAAGGAGGAAGTAAAGCAGGCGGTTGCAGAT GATCTAAACTCAATTCGTTCATCACCCTGCGAATGGTACATATGTGATGATGACCAGAATGGTACAAGGTTCTTTGTTAT TCAGGTAGGTAAGCGTTAATGGGGACATGTTTTTGCTTTTTTCAGTATAAATTGAACTTCTTGGTTGCGTTCAGTTTTGC TGTAATTCGTGACCCGTCAAATATGATTGAAACATTATCATTGTTGTTTCTCAATATCTAGTTGTGATATTTTTGGGGTG TATGTAATTCACGGTCATTTTTTATGTATATGTTCTGCTCTTTCTTACTATTTATTTAATTTAATATAAATATGCAGGGT TCTGAGTCAATGGCATCCTGGCAAGCAAACCTTCTTTTTGAGCCGGTTAAATTTGAGGTAATTTTCAGACTGAGGTAGTT TCTTAATATGTAATTTTTCTTGTCAAAGAGGGAACTTTCGTTCTTTTAACAGTTACGAATAAATGTATTTGATTTGAATC ATTGTTAATGTTTATCCAACTATATCATGAAAATGAGACACTGATGTACATATCTTTTGTTTAGGGGTTGGATGTCCTTG TGCACAGAGGTATTTACGAGGCTGCTAAAGGGATATACCAACAGATGTTGCCAGAAGTTCATTCTCATCTAAGAGCAAAA GGTTCTCGTGCAACTTTCCGTTTCACAGGGCATTCTCTTGGTGGAAGCTTGGCGTTACTTGTAAATCTCATGCTCTTAAT ACGACAAGAAGTGTCAATCTCCTCTCTACTTCCGGTGATAACTTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTC TCCTCGGCAAGCTAGGTCTACCACGGAGTCACCTTCAGGCAATTATGATGCACAGAGACATAGTACCACGAGCATTTTCC TGCAAATATCCTGACCACGTCGCAAGACTGTTAAAGGCTGTCAATGGGAACTTCCGTGACCATCCTTGTCTCAATAACCA AGTAAGTTCCTGCTTATCCGAAAGTTCTGTAAACAAATAAATTTCTTTAATAAGCCTCTGGGGTCCGATCATACTAGAAC TAATGCACCGGTTTTACTTATTTGTGATTTTTTTTACTGCAGAAGTTACTATATGCACCAATGGGTGAACTGCTGATTCT ACAGCCTGATAAGAAGTTTTCACCAAGCCATGACCTCCTGCCATCAGGCAGTGGTCTATATATCTTGTGTTGTCCTTTGT CAGAATCCAATGATGCAGAGAAGCTGCTCCGAGCCGCGCAGTTGGAGTTCTTGAACTCGCCTCATCCACTTGAGATATTA AGTGACCGATCTGCTTATGGATCTGAAGGATGCATACAAAGAGATCATGACATGAATTCCTACTTAATCTCCGTGAGAAC CGTGATTCGCCAGGAACTTAACCAGATCCGTAAAGCAATGAGAGAACAGCGGCGGAAGGTGTGGTGGCCTCTGGTGTTGC CACGCGGAATCGATGCCAACATTGTTGTTGGTAGATCCATGGTGTCAGTCAATGTGGGTGGTCAACGCCAGTCCTCATTC TCTGGCATGATACAGATAGGAAGAGAGTCCTTGAAAAGGTTCAGCAGACTTGTTGCATCTCAACATATGCATTTGTTTGT GCTACTATTATTCCCTGCAAGGTTGTTACTTTTGGGGGCATATAACGTGATTAGCTTCAAATGAATCATTATTGAAGAGG GAAAGAAAGGGAAGGGACAGTTGTATATAGGGTGTGACCACATGGTTTGTAGTAGGACATTAGATGATTCTTTATTCTTT TATTTCCAAAGTAAAATGTAGTATCTCTCATGAATGGTGCTTGTAGAAGGATGTTGCTCAAATATTAACACATAAATTTA ATTAGTTGAGGTTATTGTTATTGCCTTCAAGTAA
CDS sequence (LotjaGi5g1v0246500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACCACCATGTGCTTCAACAATGGGATCGTTCCCTCGATCCCGATCGGCGGCTCTGTGGACGCACGCGCCAACCC TTCTCAGGTCAGCGCGATGGGGCGTTCAGCGGCGGAGAAACCGAAACCGCCGCAAAAGTCGTTGTTCTCGAGATTCTCGT TTAGGTATCCTTTAGAGTCTCTCTGGCCGCGGGGAGCTCGGGACGGCGGGTTTAGTGGGCTGGCCTTAGACGACGCTGTT TTGGTGGAGGACGGTGAAGAAGAGAAGGCTGAAAGAGATGATGAAAGGGAGGGTGGGAACTGGGTTTTGAAGATTTTGCA TGTGAAGTCGGTGTGGAAGAGGGAACAGGGGAACGGTGGTGATGAGGAGAATCAAGGAGAAGGTACAGCCAACGATCACA GGAATGAGGATGAGGAGGTGTGTTGTGATGGTTGCATGGTTGATCAAGATGATGACGAAAAAGAAGAAGAAGAAGAAGAA GAAGATGTTCAGTTTGATAGAGACTCGTTTTCCAGAATGTTACGGAGGGTGTCTTTGGCTGAAGCTAGATTGTATGCGCA GATGTCACACTTGGGGAGCTTGGCCTACTCTATTCCCAAAATCAAGCCGGGGAAACTCTTAAAACATTATGGTCTGCGTC TTGTAACTTCATCAATAGAGAAGAAGGAATTGGCTGCAGCAGCTGAAAAAACTCCTCAGGAAGGTGAAACTAATGAGAAG GCAGAAGATGAGAATGAAACAAAGGAGGCGAAGAACGGTGGATCCAAGATAAGTGCATCTGCTGCTTACAACATTGCTGC CTCTGCTGCATCTTATCTTCATGCTCAGACTAGGAGCATACTCCCATTCAAATCTTCAACTGCTGCGGATGGTAAAGGTT CCCCTGAAGGAAGCAATGAAAGCCTTAGTGGTGTTAACATGTTAAACACAGAGTTCGGATCTTTGATGGCAACTACTGAT TCAGTGACAGCAGTGGTTGCAGCAAAGGAGGAAGTAAAGCAGGCGGTTGCAGATGATCTAAACTCAATTCGTTCATCACC CTGCGAATGGTACATATGTGATGATGACCAGAATGGTACAAGGTTCTTTGTTATTCAGGGTTCTGAGTCAATGGCATCCT GGCAAGCAAACCTTCTTTTTGAGCCGGTTAAATTTGAGGGGTTGGATGTCCTTGTGCACAGAGGTATTTACGAGGCTGCT AAAGGGATATACCAACAGATGTTGCCAGAAGTTCATTCTCATCTAAGAGCAAAAGGTTCTCGTGCAACTTTCCGTTTCAC AGGGCATTCTCTTGGTGGAAGCTTGGCGTTACTTGTAAATCTCATGCTCTTAATACGACAAGAAGTGTCAATCTCCTCTC TACTTCCGGTGATAACTTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTCCTCGGCAAGCTAGGTCTACCACGG AGTCACCTTCAGGCAATTATGATGCACAGAGACATAGTACCACGAGCATTTTCCTGCAAATATCCTGACCACGTCGCAAG ACTGTTAAAGGCTGTCAATGGGAACTTCCGTGACCATCCTTGTCTCAATAACCAATTACTATATGCACCAATGGGTGAAC TGCTGATTCTACAGCCTGATAAGAAGTTTTCACCAAGCCATGACCTCCTGCCATCAGGCAGTGGTCTATATATCTTGTGT TGTCCTTTGTCAGAATCCAATGATGCAGAGAAGCTGCTCCGAGCCGCGCAGTTGGAGTTCTTGAACTCGCCTCATCCACT TGAGATATTAAGTGACCGATCTGCTTATGGATCTGAAGGATGCATACAAAGAGATCATGACATGAATTCCTACTTAATCT CCGTGAGAACCGTGATTCGCCAGGAACTTAACCAGATCCGTAAAGCAATGAGAGAACAGCGGCGGAAGGTGTGGTGGCCT CTGGTGTTGCCACGCGGAATCGATGCCAACATTGTTGTTGGTAGATCCATGGTGTCAGTCAATGTGGGTGGTCAACGCCA GTCCTCATTCTCTGGCATGATACAGATAGGAAGAGAGTCCTTGAAAAGGTTCAGCAGACTTGTTGCATCTCAACATATGC ATTTGTTTGTGCTACTATTATTCCCTGCAAGGTTGTTACTTTTGGGGGCATATAACGTGATTAGCTTCAAATGA
Protein sequence (LotjaGi5g1v0246500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
METTMCFNNGIVPSIPIGGSVDARANPSQVSAMGRSAAEKPKPPQKSLFSRFSFRYPLESLWPRGARDGGFSGLALDDAV LVEDGEEEKAERDDEREGGNWVLKILHVKSVWKREQGNGGDEENQGEGTANDHRNEDEEVCCDGCMVDQDDDEKEEEEEE EDVQFDRDSFSRMLRRVSLAEARLYAQMSHLGSLAYSIPKIKPGKLLKHYGLRLVTSSIEKKELAAAAEKTPQEGETNEK AEDENETKEAKNGGSKISASAAYNIAASAASYLHAQTRSILPFKSSTAADGKGSPEGSNESLSGVNMLNTEFGSLMATTD SVTAVVAAKEEVKQAVADDLNSIRSSPCEWYICDDDQNGTRFFVIQGSESMASWQANLLFEPVKFEGLDVLVHRGIYEAA KGIYQQMLPEVHSHLRAKGSRATFRFTGHSLGGSLALLVNLMLLIRQEVSISSLLPVITFGSPSIMCGGDSLLGKLGLPR SHLQAIMMHRDIVPRAFSCKYPDHVARLLKAVNGNFRDHPCLNNQLLYAPMGELLILQPDKKFSPSHDLLPSGSGLYILC CPLSESNDAEKLLRAAQLEFLNSPHPLEILSDRSAYGSEGCIQRDHDMNSYLISVRTVIRQELNQIRKAMREQRRKVWWP LVLPRGIDANIVVGRSMVSVNVGGQRQSSFSGMIQIGRESLKRFSRLVASQHMHLFVLLLFPARLLLLGAYNVISFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 425 | 425 | - | – | |
PANTHER | 15 | 714 | 700 | 0.0 | ||
PANTHER | 15 | 714 | 700 | 0.0 | – | |
MobiDBLite | 26 | 46 | 21 | - | – | |
MobiDBLite | 114 | 137 | 24 | - | – | |
MobiDBLite | 225 | 254 | 30 | - | – | |
MobiDBLite | 225 | 251 | 27 | - | – | |
MobiDBLite | 285 | 304 | 20 | - | – | |
Gene3D | 308 | 528 | 221 | 1.7E-25 | ||
CDD | 340 | 495 | 156 | 1.42274E-24 | – | |
SUPERFAMILY | 346 | 528 | 183 | 4.29E-25 | ||
Pfam | 363 | 499 | 137 | 8.9E-26 | ||
Phobius | 426 | 445 | 20 | - | – | |
Phobius | 446 | 692 | 247 | - | – | |
Coils | 616 | 636 | 21 | - | – | |
Phobius | 693 | 714 | 22 | - | – | |
TMHMM | 694 | 716 | 23 | - | – | |
Phobius | 715 | 717 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of LotjaGi5g1v0246500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…