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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0262200 |
| Transcript ID | LotjaGi5g1v0262200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase interacting (KIP1-like) family protein; TAIR: AT1G03470.1 Kinase interacting (KIP1-like) family protein; Swiss-Prot: sp|Q66GR8|NET3A_ARATH Protein NETWORKED 3A; TrEMBL-Plants: tr|K7MZF8|K7MZF8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0262200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57110643..57113483) extracted from Lotus japonicus Gifu genome v1.2.
GAATATGGTCACACTTTTACAATTTAACATTATTGGCATTTGGCTCGAGGTACAGAATCAAATCAAAGCCGTCAATTCAA GTACACGTGTCGCAATCCAACCGGTGTTATAAGATAACCACACTATTACTTCCACCAAAGTGATAGCACAGAACCACAGA CTCCACTCTGGTTCAGTGAAAGAACGAGTCACTCCAACGAGTTAACTCAGCAAGGTGAGTGCTTCATTTTCTTCATCACT TCTCTCTGTGTGTGTTCATTTGAATGATGGGCATTTCAAAGTTGAAGTCTTTTTGCTCCTTTCTCGGTACCCATTTGCCA AAAAATGGTTCTTGTGTTTATCTCTGTGCTGCTGCATGCATCTTTTTCTTCTTCCATGATTGAAAACTCGGTTCTTTTTT TCCTAATGAATCATCTTGGTTTTGAATTTTTTTTTTGAAAATTTAATAGTTTATCAGCAATGACATTCTTCTAGGAATGA TGATAAGTGTGTGTGGTGCTGCCTTGTAAATAACGGAACTCTTTGTATTCTTATGGATACAATTTTTTCTTAATGGTCGG TGCATTTTGTCCCTTAACACAAATTTGAAGTGTTTGGTGCTTTTCACTCTCTGTATTCTTATGGCTACAATTTTTTCTTT TGGTTTTTTGCTGCTAAGAGTGCTAGTTACTGATTAGTCATCATCTATTCATCTTATGATGATTCTTCAGATTTTATTTG GGGAATTCAAGGTTCTATTTTATTGTTTTATTCTTTGTCTTTTCCTATGTAGGTTGTTGTTGGTGGTGAATCTGAAATCT AAGAAAATAGTGAGGGATAGAATGGGTGAAATGAAGAAGAATCAACAGTCAAACTGGTGGTGGCTTGACAGTCATAGCAC CACAAAACGATCCCCATGGCTTCAATCTACACTCACTGGTAACTACTTCCTTCTCTTCTTCTCATTATTTTGGTATAACA ATTTCAATTTAACATGTATGCAGCATGCTTTCTGAAAATTGATTTTGATTGCTATCATAACATTGCATGTAAATTGATGT TATTTTACCCTTAATGAGGGCAAAACATTTGAATTTCTAAGGTCCACTAATAATTTTCTGTCCCCTTATAATTCTGTGAA GTTTTTTGGACCCACATGTGTGATGTGTCTCTACCTAAACAAAAAGTTACTTGAAATCCATCTTCTTCTCAAAAGAAAGC ATGAGTATAAAGATAAAAAGTAGAACATAAGTACTTGTATACAAAAGTGAAAAAGATTATGAACCTTGTTATTAATCCAT GAGTGTTACTTTTCAAAACTTTTCCCCCCTTTCCACCTGCTCTATGCATTTTTTAATCTTTTGAAAACACAGTGATTAAT TTGTCTGATTGTGACATACATCTGGTATCTAGGCCTTTTTGTGAACATATCCTGGAACTGGATATGTATTGACACTTGTG CAAACAGATGTTAGCACTAACTTTGAGGTGAGCGGAACTCTTTTTAGTGTATGTTTGGATATCAATTGAGTGCAACGTAA CATGACGTTCATATCAATTTATAAGAAGAGTTTCGTTCAATTTTTATCTTGAAGTGGTAACGTCTGTTTGTATCAAAAGA TAACCAGATTAAGATGAAAGTTGGTTTGCGTTCAACTGATATACAAACACACTTTATTGTTGAGAGGTAGGTAGTAAGAG ATATAGGAAGTGATATGTGTTTGTTTATGGCAGAGCTAAACGAGAAGACGAAGGCAATGTTGAAACTAATTGAAGAAGAT GCAGATTCCTTTTCACAACGTGCAGAGATGTATTACAAGAAGAGACCAGAGCTCTTGAGAATGGTTGAAGATTTCTACAG GTCACACTGCTCGTTAGCGGAGCGATACGATCAAGTCAAACCCGACCCGGGAACTCGCCTTATGAAGACAAGGGTGTCCC CTTTTTCTTCACCCAAGTGTCATCAATCAGAGAAGTTTAAGAGCTTTTCTGATGATGGTTATTCTGAGAGTTGTGGTGCA GAGGAGGAGTCTGTGAAATCTGAAGTTGATGATCCTGAGCTTGAAGAGGATACTAAATCTAAAGTAGAGAAGGAAGTTCA GTTTGTGGCTGCAAATGAAGTGATGAGTCTGGGGGAGGAAATTGAGAGGCTTAGCGAAGAGAACAAGGCTCATGAGGAAC AAATCAAGAAGAAAGAAAATGTTCATGATGAAGTAATGCTGTTGAGGGAAGAAATAGAACTGCTCAGGAAAGAGAATAAA GCTCAGAAAGATGAACTCAAGATGAAAGATACCATTTGCAATGAAGTGGTGGTGTTAAGGGAAGAGATAAAAAGATTCAG AGAAGAGAACAAGGCTCAGAAGGATCATCTCAAGCAGAAAGATGAAGAGAAAATAGAGGTGATAAGACACCTGAGTTTTG CAATCAATGTGCTGAAAGAGGAGAATGTGAAGATGAGAAGCTTCATTGCTAAGCAGGGTAAGGAGTTTGCCAAGAAATGG AAGAACCCATTTGAGTTCAATAAACTCATTGGATCACTACAAGGGAAGTTCCTCAATCTCAATGGGATTCCAAGGAAACA TAAGCCTAGTGTTGTAGCTCTCTAGAATTTAGATGCAAGGCTCACAAAGTAAATAGAGTAATTCTGTATAAAATCTTATA TACATGAGATAGGTGCTTACTCAAGTAGCCTTAGAAATACAGAATATGTTCTTAGTCTGAAAATCCCAGTGTACTATCTT AGATATAACTAAATAGAAATTTTGTATACATGTCCCTTGTTGGTGAAATATGCATATTCAATTTTTCTCTGTTTTTTATT CGGTATCTACAGGTAGCCCACCCATGTTTTCTTCTATATCT
CDS sequence (LotjaGi5g1v0262200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATTCTTCAGATTTTATTTGGGGAATTCAAGGTTCTATTTTATTGTTTTATTCTTTGTCTTTTCCTATGTAGGTT GTTGTTGGTGGTGAATCTGAAATCTAAGAAAATAGTGAGGGATAGAATGGGTGAAATGAAGAAGAATCAACAGTCAAACT GGTGGTGGCTTGACAGTCATAGCACCACAAAACGATCCCCATGGCTTCAATCTACACTCACTGAGCTAAACGAGAAGACG AAGGCAATGTTGAAACTAATTGAAGAAGATGCAGATTCCTTTTCACAACGTGCAGAGATGTATTACAAGAAGAGACCAGA GCTCTTGAGAATGGTTGAAGATTTCTACAGGTCACACTGCTCGTTAGCGGAGCGATACGATCAAGTCAAACCCGACCCGG GAACTCGCCTTATGAAGACAAGGGTGTCCCCTTTTTCTTCACCCAAGTGTCATCAATCAGAGAAGTTTAAGAGCTTTTCT GATGATGGTTATTCTGAGAGTTGTGGTGCAGAGGAGGAGTCTGTGAAATCTGAAGTTGATGATCCTGAGCTTGAAGAGGA TACTAAATCTAAAGTAGAGAAGGAAGTTCAGTTTGTGGCTGCAAATGAAGTGATGAGTCTGGGGGAGGAAATTGAGAGGC TTAGCGAAGAGAACAAGGCTCATGAGGAACAAATCAAGAAGAAAGAAAATGTTCATGATGAAGTAATGCTGTTGAGGGAA GAAATAGAACTGCTCAGGAAAGAGAATAAAGCTCAGAAAGATGAACTCAAGATGAAAGATACCATTTGCAATGAAGTGGT GGTGTTAAGGGAAGAGATAAAAAGATTCAGAGAAGAGAACAAGGCTCAGAAGGATCATCTCAAGCAGAAAGATGAAGAGA AAATAGAGGTGATAAGACACCTGAGTTTTGCAATCAATGTGCTGAAAGAGGAGAATGTGAAGATGAGAAGCTTCATTGCT AAGCAGGGTAAGGAGTTTGCCAAGAAATGGAAGAACCCATTTGAGTTCAATAAACTCATTGGATCACTACAAGGGAAGTT CCTCAATCTCAATGGGATTCCAAGGAAACATAAGCCTAGTGTTGTAGCTCTCTAG
Protein sequence (LotjaGi5g1v0262200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMILQILFGEFKVLFYCFILCLFLCRLLLVVNLKSKKIVRDRMGEMKKNQQSNWWWLDSHSTTKRSPWLQSTLTELNEKT KAMLKLIEEDADSFSQRAEMYYKKRPELLRMVEDFYRSHCSLAERYDQVKPDPGTRLMKTRVSPFSSPKCHQSEKFKSFS DDGYSESCGAEEESVKSEVDDPELEEDTKSKVEKEVQFVAANEVMSLGEEIERLSEENKAHEEQIKKKENVHDEVMLLRE EIELLRKENKAQKDELKMKDTICNEVVVLREEIKRFREENKAQKDHLKQKDEEKIEVIRHLSFAINVLKEENVKMRSFIA KQGKEFAKKWKNPFEFNKLIGSLQGKFLNLNGIPRKHKPSVVAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 12 | 12 | - | – | |
| TMHMM | 13 | 30 | 18 | - | – | |
| Phobius | 13 | 33 | 21 | - | – | |
| Phobius | 34 | 364 | 331 | - | – | |
| PANTHER | 45 | 260 | 216 | 4.9E-123 | – | |
| PANTHER | 45 | 260 | 216 | 4.9E-123 | – | |
| ProSiteProfiles | 52 | 133 | 82 | 44.327 | ||
| Pfam | 54 | 127 | 74 | 2.3E-36 | ||
| MobiDBLite | 142 | 190 | 49 | - | – | |
| Coils | 204 | 293 | 90 | - | – | |
| PANTHER | 246 | 361 | 116 | 4.9E-123 | – | |
| PANTHER | 246 | 361 | 116 | 4.9E-123 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Actin binding | Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. |
Expression pattern of LotjaGi5g1v0262200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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