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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0265900 |
| Transcript ID | LotjaGi5g1v0265900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exostosin-2; TAIR: AT5G04500.1 glycosyltransferase family protein 47; Swiss-Prot: sp|Q84WB7|GT645_ARATH Glycosyltransferase family protein 64 protein C5; TrEMBL-Plants: tr|A0A072VN21|A0A072VN21_MEDTR Glycosyltransferase family protein; Found in the gene: LotjaGi5g1v0265900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57681230..57686676) extracted from Lotus japonicus Gifu genome v1.2.
TATATAGGGAAACACCAAGCTAAGGAAGGGTGGTTGTGGTTCAGTCACAGAACAATTGTCAAAATTACAACATTGACCCT GTCAACCTCGTTTTCTGAGAAACCCAAACAAAACCAAAAGATAGAAACCTGGTTTGCGACGAAATGCCAGTGAAACAGTT GTAACACGGTGGCGCTGCCACGGCAGTGTGAGATCTTCCGGCGGAACTGACCGTTTTTCTCTGCCCCTTTTGCGTGATGG GTTCCGGCCAGATTGGCGGCGGCGGTAGTGGCGGCGGAGGCGGCGGTGGTTCTAGTGGTGGTGGTAGCAGTAGTTGCTGT GACATGAGTCTCAAGTGTTGGTGTAGGTGGAGATTGGAGGGCCAACAGTGTTATAACCGGTTCTTCTCTTCTGGTTTCGT TTTCTTCTTCGGGTGTTTCGTTTTGTTTGGATCGATTGCTACCCTTTATGGTTGGCTCGCTTTTTCTCCCACTGTGCACA CTGCTTTGTCTCCTTTTGGTTGTCAAGTTGACAATGAGGGTTCTTGGTCAATTGGGATTTTCTTTGGTGACTCTCCTTTC TCTCTAAAACCCATAGAGTCTGTAAGTTTCTTCTATCTCTCTCTAATTTGCTCTTTTTTTGTCCTTGGGGTTTTTTTGTG GGTTTACTGTGTTATTTTTCATATGCATGGTTGTGTTAATTGTTAATTTCTCTCTGAAAGTTGTCAATTTTTGAAAGAAA AATTAGGATAAAAGTGATTTTATTTTTGCAAGTTTTCACACACTCTAGATGATGATTACTTGAGTAGTGTTTGGTATTAT GGAGTATGATGTTGAAAATTTTGGTTTTGTTCTGGTGAATTGATCAAATATGAAATTATTTCAATTGGGAATTTGTTTTG TGATGTGAATTTGAGGGATGAAATTGTTTCAGTTCGTTTCAGTTGATGGTTTTGGTTCTGTGCAGACGAATGTATCGAAT GATGACAGCGCTGCTTGGCCGGTTGCGAACCCCGTGGTGACGTGTGCCTCGGTCTCTGATGCTGGTTTTCCCAGTAATTT TGTTGCTGACCCTTTTCTTTTCATTCAGGTAATAGGGTCTTGTCACTCTAGCTTCCTTCATATATTTGATGTTTCAGATT CTTTGATATAGTTCAAGTCCCTTTCCCTTGCTGTTTTTTGTTCTATTTGTACATTTTTTGCCAGCAAAATTCTACCTATG TTTACATGCCGTTTTTTTTGGCCAAGTCAATGTTTGGATTCAACCACTAATCCACAATGATAGAAGCCTGGTGTTAGAAA AAGATAATACATCAGTTTGTCTTTATTTCTACAATTAATTTGCCTGTTTTTGGAGATATTTGCTTGGAGTTTAAATTTGA CACGAAGCAGTTGTTTAGGCTTTTTCTCAGGCTGAAAGAAGCCTGGATCTAAACTAGTAATATTTTGTAGTTGCTTGAGG TAATTCCAGAATTATTTATGGTAAATGAGAAACCATCAAACCGTTGAAAATTTGAAGATGGAGGTCAGAAAATGTCTAAA ACATTAAATTGAGAAATGAGATGAAAATTTATAGCTAGGTTGGGTTCATGTGATATCTTGTATGTTTTTATTGTCTGCAA AATCCTGCTCCTAAATACAGGTTAGGTTGTGTGGGTGACGATTTCACAGTAAACCCGTCTATTTTTTGTACTGTTAAGGA GCTAATATCAGTTTACTGAATAACAAAAGTTGGCTTCTACTTACTCACTGTATGTATCCTTCTGAGTTGTGCTGTCATCA CATAGCTGATAACTATACTAATTGGGGTCCTCTTTTGGATTTAAAAAGAAACATGGGGCCCTCTTGGTCATCCATATATT GAAGATTTTGACTAGTTTTATGTTGGCTGCCGAGGCCTAACACAACCCTCTTGGTTATCCATGTTGTAAAATTTATAATA AAGCTAGTAGGAATAGGTCCAATTATATAGTGAGCGCCTTGAATAGTTGCATAATCTCCATTTTATCAATTTTTATTTTA AAATTTACATTTTGATTCAACTAGTGGTACTTACTGCGTAGAGGTGATTTATTGAGTACTGTCAACCTGATTTTTCTGCC TTTGGACCATCATATTTTGCTTGGGGTAGGAAAAAATACTGTGTAACATCCCTGAAAGTTCTTTTCTGGAGTTGTAAACG AAGTTGCTTTCTTACAAGGATGGACAATTGTAGACTCTACATTTGAACTATGTAGGTTTTTCTAAGTGTCTTTAAAAAGA GTGGCCTCATAGACAAGGCTCTCACCACAGTAGGAAGAATGTTTGAGTTTTGTCAAGGGAAGATATAACAGGTGAATTAG GTCCAATATTGGATAACAGGGTGGCATTTCTATGGACTTGTTCTGACAAAACGAGTAGTGCCTTTCGTGCATTTTACTCT TAAATAGTAAAATTTCATAATGGATAGAATCAATTTTTTTTATCTCCTCTGTCAAATTTGTCTGCCTAACAGTCAGTTTA TCAGTTGCTTCTGAAAGGTTACAACAAAATATTGCCTTCATTATTTGTGTTTGTATCTACTTCAGCCTTATGCCCATATA GGTGTCTGTCCATCGTTTAAACTATTTATCTTGTTGGTTTGAAACCTGAGTTTGTACTTTGTACTAATGTTTGATAGACA GTTTCCAAAGAAAATATAGTATTCAAAAAGCCTATAAATGTTTGTATTTTTACAAATCAGGACATGCTTGATCATGTTTT ATGTAGATATATCAGTGATGACCGATGAGAAATATTAATGGAAAAGAGTTAATATCACATTATGAACTATTCACTGATAT GACATTTGCAATTCAGGGAGATACTCTGTACCTGTTCTATGAGACAAAGAATTCAATAACAATGCAAGGTGATATCGGAG TTTCAAAAAGTACTGATAAAGGAGCAACATGGCAACAGCTAGGAATTGCCTTGAATGAGGATTGGCATCTTTCTTATCCA TATGTTTTTGAGCATGATGGCCAGGTATTTTTCCTAAGAAATGATGTGTTTGTTCATGCATTTGAACTTGTCTAATGGCT CATTTACGACTTAAACTTGTCATTATAGTTGTTGTGATCCTCATTTTTCTTTTCCCAATTGTAACTTCACAGATATATAT GATGCCTGAGGGAAGTAAAAGAGGAGATCTTCGTCTCTACAGAGCAGTTAACTTCCCTTTGCAGTGGAGATTGGAAAAGG TCATAATGAAAAAGCCCCTTGTTGATTCCTTCCTTGTCAATTATGGTGGTAAGTATTGGCTTTTTGGCTCAGATCATAGT GGTTTTGGCACGAAGAAGAATGGGCAGCTTGAGATTTGGTATAGCAGTTCACCTCTTGGTCCTTGGAAACCTCACAAGAA AAATCCCATTTATAACATTGACCAGAGCTTGGGAGCTCGCAATGGAGGCAGGCCATTTGAATATGAAGGAAATCTTTATC GTATGGGTCAGGACTGTGGGGATACATATGGGAGACGGGTGCGTGTTTTCAAGATAGAAACTCTTACTATTGAAGACTAC AAAGAAATTGAAGTTCCATCGGGGTTTGTTGAGCCAAACAAGGGGCGAAATGCTTGGAATGGTGCTAGGTACCATCACTT GGATGCGCAACGTCTGCCATCTGGTGGCTGGGTTGCTGTTATGGATGGGGATCGTGTTCCCTCCGGGGATTCAACCCGGC GGTTCATGGTTGGTTGTGCTTCTGTTACAGTTGCTGCTGCGCTCATTTTGCTATTGGGCGTGTTACTCGGATTTGTAAAT TGTATTGTTCCTCTCAATTGGTTCATTCATAACTCTGGGAAGAAGAATGTTGCTATATTGTCTTGGGAAAGATCAAATGT GTTCTCTTCAAAAATAAGACGGTTTTGCAGCCGCTTGAACAGGGCCCCAAATTTTCTCCGGGGCAAGATAAAGCACAATG CTTGTGCCAGGAGGTTTGTTCTTACTGTAATATTTGTAGTGGGGGTCGGATTGATGTGCGTAGGATTTAAAAATATCTAC GGGGGTAATGGTTCAGAAGAACCTTATCCATTCAAAGGACAATATTCCCAGTTCACCTTATTGACAATGACCTACGATGC TCGTCTCTGGAACTTGAAGATGTATGTGAAACACTACTCAAGGTGCTCTTCTGTAGGGGAGATAGTTGTGGTGTGGAACA AGGGAGTCCCTCCAGAATTGAGTGATCTAGATTCTGCAGTACCAGTGAGGATCAGAGTAGAGGAGAAGAACTCTCTCAAC AATCGCTTCAAGGCTGACCCGTTGATAAAGACACGCGCTGTCCTCGAGCTTGATGATGATATTATGATGACATGTGACGA TGTTGAGCGAGGTTTTAACGTGTGGCGTCAGCATCCGGACCGTATCGTTGGATTCTATCCTCGGCTTATCAGTGGGAGCC CACTGAAATACAGGGGAGAAAAATATGCCAGAAGCCATAAAGGGTACAACATGATTCTCACCGGCGCAGCGTTTATTGAT TCCCAAGTAGCTTTCAAGAGGTACTGGGGTGAGGAGGCCAGGCAAGGGAGGGAAATGGTGGACAAGTTTTTTAACTGTGA GGATGTGCTTTTGAATTATCTGTATGCAAATGCGAGCTCATCGTCGAGGACGGTTGAATATGTGAAACCGGCTTGGGCCA TTGACACTTCAAAGCTTTCTGGCGCGGCTATTAGCCGGAACACGAAGGTGCATTATGGATTGAGAAGCCATTGCCTTATG AAATTCTCAGAGATGTATGGAAGCTTAGATGGTCGGAAATGGGGATTTGACAGTAGGAAAGATGGTTGGGATGTATAGTA GGGAGTTTTTTTATAGGTAGGTTTTGTCAACCTTTTTTTTGTATTTTTACATCTTGGTGGGTATAAAGTCTGGTCTATAC TTGTACCCCACTCACTGTGAATCTTATTTTAGGTGGTTTTGCTATAGAATGTCTGCAACATGTAAATTGGGTTTAAAATG GCCTTTTCATGTTATATTTTTTTAATTTGTGCCTCCAACCCCCTGGGGGTGATCTGTGATGATGGAAGGTGGGAATATAG GGAAAAAGAAAGCCGAGACAAATGGAAAACTGGATAGAAGAGTGTTTCTTTTTAAGACATTCCTTAGAAACTGTAATTCT GATGCTGGTGTTGATTCTAATTTTGATTGCTTTTTAACTATCTGCTACTTTTAAGGGTGGCTTTCTTTTAATCTTTGATT CTTAGATTGTCTTTTGGTAGTGGGGTGAATCTGAACCATACATGGAGCCTCAGATTGGGTTTAACATATTGGTTCAACTG GTTATCATGTAATATGTAAGGTTTGCAACTAACCTAACAGCAGCAGTAGGATAAAGAAGAGAAGAGAGAAGAGAAAAAGA GAGAGGGATACACAAACAATCCTAATTGACTTTAATTCATACTTTAACCTAAGGAGAGACTCCTATTTATAATAAACTAA TATTGCT
CDS sequence (LotjaGi5g1v0265900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCCGGCCAGATTGGCGGCGGCGGTAGTGGCGGCGGAGGCGGCGGTGGTTCTAGTGGTGGTGGTAGCAGTAGTTG CTGTGACATGAGTCTCAAGTGTTGGTGTAGGTGGAGATTGGAGGGCCAACAGTGTTATAACCGGTTCTTCTCTTCTGGTT TCGTTTTCTTCTTCGGGTGTTTCGTTTTGTTTGGATCGATTGCTACCCTTTATGGTTGGCTCGCTTTTTCTCCCACTGTG CACACTGCTTTGTCTCCTTTTGGTTGTCAAGTTGACAATGAGGGTTCTTGGTCAATTGGGATTTTCTTTGGTGACTCTCC TTTCTCTCTAAAACCCATAGAGTCTACGAATGTATCGAATGATGACAGCGCTGCTTGGCCGGTTGCGAACCCCGTGGTGA CGTGTGCCTCGGTCTCTGATGCTGGTTTTCCCAGTAATTTTGTTGCTGACCCTTTTCTTTTCATTCAGGGAGATACTCTG TACCTGTTCTATGAGACAAAGAATTCAATAACAATGCAAGGTGATATCGGAGTTTCAAAAAGTACTGATAAAGGAGCAAC ATGGCAACAGCTAGGAATTGCCTTGAATGAGGATTGGCATCTTTCTTATCCATATGTTTTTGAGCATGATGGCCAGATAT ATATGATGCCTGAGGGAAGTAAAAGAGGAGATCTTCGTCTCTACAGAGCAGTTAACTTCCCTTTGCAGTGGAGATTGGAA AAGGTCATAATGAAAAAGCCCCTTGTTGATTCCTTCCTTGTCAATTATGGTGGTAAGTATTGGCTTTTTGGCTCAGATCA TAGTGGTTTTGGCACGAAGAAGAATGGGCAGCTTGAGATTTGGTATAGCAGTTCACCTCTTGGTCCTTGGAAACCTCACA AGAAAAATCCCATTTATAACATTGACCAGAGCTTGGGAGCTCGCAATGGAGGCAGGCCATTTGAATATGAAGGAAATCTT TATCGTATGGGTCAGGACTGTGGGGATACATATGGGAGACGGGTGCGTGTTTTCAAGATAGAAACTCTTACTATTGAAGA CTACAAAGAAATTGAAGTTCCATCGGGGTTTGTTGAGCCAAACAAGGGGCGAAATGCTTGGAATGGTGCTAGGTACCATC ACTTGGATGCGCAACGTCTGCCATCTGGTGGCTGGGTTGCTGTTATGGATGGGGATCGTGTTCCCTCCGGGGATTCAACC CGGCGGTTCATGGTTGGTTGTGCTTCTGTTACAGTTGCTGCTGCGCTCATTTTGCTATTGGGCGTGTTACTCGGATTTGT AAATTGTATTGTTCCTCTCAATTGGTTCATTCATAACTCTGGGAAGAAGAATGTTGCTATATTGTCTTGGGAAAGATCAA ATGTGTTCTCTTCAAAAATAAGACGGTTTTGCAGCCGCTTGAACAGGGCCCCAAATTTTCTCCGGGGCAAGATAAAGCAC AATGCTTGTGCCAGGAGGTTTGTTCTTACTGTAATATTTGTAGTGGGGGTCGGATTGATGTGCGTAGGATTTAAAAATAT CTACGGGGGTAATGGTTCAGAAGAACCTTATCCATTCAAAGGACAATATTCCCAGTTCACCTTATTGACAATGACCTACG ATGCTCGTCTCTGGAACTTGAAGATGTATGTGAAACACTACTCAAGGTGCTCTTCTGTAGGGGAGATAGTTGTGGTGTGG AACAAGGGAGTCCCTCCAGAATTGAGTGATCTAGATTCTGCAGTACCAGTGAGGATCAGAGTAGAGGAGAAGAACTCTCT CAACAATCGCTTCAAGGCTGACCCGTTGATAAAGACACGCGCTGTCCTCGAGCTTGATGATGATATTATGATGACATGTG ACGATGTTGAGCGAGGTTTTAACGTGTGGCGTCAGCATCCGGACCGTATCGTTGGATTCTATCCTCGGCTTATCAGTGGG AGCCCACTGAAATACAGGGGAGAAAAATATGCCAGAAGCCATAAAGGGTACAACATGATTCTCACCGGCGCAGCGTTTAT TGATTCCCAAGTAGCTTTCAAGAGGTACTGGGGTGAGGAGGCCAGGCAAGGGAGGGAAATGGTGGACAAGTTTTTTAACT GTGAGGATGTGCTTTTGAATTATCTGTATGCAAATGCGAGCTCATCGTCGAGGACGGTTGAATATGTGAAACCGGCTTGG GCCATTGACACTTCAAAGCTTTCTGGCGCGGCTATTAGCCGGAACACGAAGGTGCATTATGGATTGAGAAGCCATTGCCT TATGAAATTCTCAGAGATGTATGGAAGCTTAGATGGTCGGAAATGGGGATTTGACAGTAGGAAAGATGGTTGGGATGTAT AG
Protein sequence (LotjaGi5g1v0265900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSGQIGGGGSGGGGGGGSSGGGSSSCCDMSLKCWCRWRLEGQQCYNRFFSSGFVFFFGCFVLFGSIATLYGWLAFSPTV HTALSPFGCQVDNEGSWSIGIFFGDSPFSLKPIESTNVSNDDSAAWPVANPVVTCASVSDAGFPSNFVADPFLFIQGDTL YLFYETKNSITMQGDIGVSKSTDKGATWQQLGIALNEDWHLSYPYVFEHDGQIYMMPEGSKRGDLRLYRAVNFPLQWRLE KVIMKKPLVDSFLVNYGGKYWLFGSDHSGFGTKKNGQLEIWYSSSPLGPWKPHKKNPIYNIDQSLGARNGGRPFEYEGNL YRMGQDCGDTYGRRVRVFKIETLTIEDYKEIEVPSGFVEPNKGRNAWNGARYHHLDAQRLPSGGWVAVMDGDRVPSGDST RRFMVGCASVTVAAALILLLGVLLGFVNCIVPLNWFIHNSGKKNVAILSWERSNVFSSKIRRFCSRLNRAPNFLRGKIKH NACARRFVLTVIFVVGVGLMCVGFKNIYGGNGSEEPYPFKGQYSQFTLLTMTYDARLWNLKMYVKHYSRCSSVGEIVVVW NKGVPPELSDLDSAVPVRIRVEEKNSLNNRFKADPLIKTRAVLELDDDIMMTCDDVERGFNVWRQHPDRIVGFYPRLISG SPLKYRGEKYARSHKGYNMILTGAAFIDSQVAFKRYWGEEARQGREMVDKFFNCEDVLLNYLYANASSSSRTVEYVKPAW AIDTSKLSGAAISRNTKVHYGLRSHCLMKFSEMYGSLDGRKWGFDSRKDGWDV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 48 | 48 | - | – | |
| Phobius | 49 | 74 | 26 | - | – | |
| PANTHER | 50 | 769 | 720 | 5.1E-287 | ||
| PANTHER | 50 | 769 | 720 | 5.1E-287 | – | |
| TMHMM | 53 | 75 | 23 | - | – | |
| Phobius | 75 | 402 | 328 | - | – | |
| SUPERFAMILY | 125 | 356 | 232 | 6.87E-26 | ||
| Gene3D | 140 | 232 | 93 | 5.2E-7 | ||
| CDD | 145 | 311 | 167 | 1.40089E-6 | – | |
| Gene3D | 236 | 352 | 117 | 4.5E-7 | ||
| Phobius | 403 | 433 | 31 | - | – | |
| TMHMM | 411 | 433 | 23 | - | – | |
| Phobius | 434 | 486 | 53 | - | – | |
| Phobius | 487 | 508 | 22 | - | – | |
| TMHMM | 487 | 509 | 23 | - | – | |
| Phobius | 509 | 773 | 265 | - | – | |
| Gene3D | 522 | 762 | 241 | 6.7E-68 | ||
| SUPERFAMILY | 525 | 755 | 231 | 5.34E-16 | ||
| Pfam | 526 | 756 | 231 | 5.0E-60 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring glycosyl groups | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi5g1v0265900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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