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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004263
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 134 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 7.393s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0044899.1
n.a. PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like [Glycine max] gi|356512936|ref|XP_003525170.1| chr0 14771637 14772333 -
2 domain predictions
2 GO terms
Lj0g3v0045259.1
n.a. PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Glycine max] gi|356545902|ref|XP_003541372.1| chr0 14868466 14870932 +
2 domain predictions
2 GO terms
Lj0g3v0095909.1
n.a. PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Glycine max] gi|356545902|ref|XP_003541372.1| chr0 40393917 40397486 -
2 domain predictions
2 GO terms
Lj0g3v0123039.1
n.a. PREDICTED: probable beta-1,4-xylosyltransferase IRX10-like [Cicer arietinum] gi|502124087|ref|XP_004498379.1| chr0 55121641 55122319 -
2 domain predictions
2 GO terms
Lj0g3v0200699.1
n.a. PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Cicer arietinum] gi|502151799|ref|XP_004508619.1| chr0 99014083 99014589 -
2 domain predictions
2 GO terms
Lj0g3v0265629.1
n.a. PREDICTED: probable glycosyltransferase At3g07620-like [Glycine max] gi|356495238|ref|XP_003516486.1| chr0 137631314 137634736 +
2 domain predictions
2 GO terms
Lj0g3v0266729.1
n.a. PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] gi|356570806|ref|XP_003553575.1| chr0 138174100 138179623 -
2 domain predictions
2 GO terms
Lj0g3v0334609.1
n.a. PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Cicer arietinum] gi|502165538|ref|XP_004513612.1| chr0 175191365 175196167 +
2 domain predictions
2 GO terms
Lj0g3v0335949.2
n.a. PREDICTED: probable beta-1,4-xylosyltransferase IRX10-like [Cicer arietinum] gi|502124087|ref|XP_004498379.1| chr0 176004201 176010824 +
2 domain predictions
2 GO terms
Lj0g3v0342139.1
n.a. PREDICTED: probable glycosyltransferase At3g42180-like [Cicer arietinum] gi|502151801|ref|XP_004508620.1| chr0 179328052 179332858 +
2 domain predictions
2 GO terms
Lj0g3v0342139.2
n.a. PREDICTED: probable glycosyltransferase At3g42180-like [Cicer arietinum] gi|502151801|ref|XP_004508620.1| chr0 179328052 179331544 +
2 domain predictions
2 GO terms
Lj0g3v0342139.3
n.a. PREDICTED: probable glycosyltransferase At3g42180-like [Glycine max] gi|356562965|ref|XP_003549738.1| chr0 179328052 179332858 +
2 domain predictions
2 GO terms
Lj0g3v0361589.1
n.a. Exostosin family protein isoform 1 [Theobroma cacao] gi|508717444|gb|EOY09341.1| chr0 190473647 190485334 -
2 domain predictions
2 GO terms
Lj1g3v0318290.2
n.a. PREDICTED: probable glycosyltransferase At5g03795 [Glycine max] gi|356563757|ref|XP_003550126.1| chr1 3712905 3716529 -
2 domain predictions
2 GO terms
Lj1g3v0448960.3
n.a. PREDICTED: probable beta-1,4-xylosyltransferase IRX10-like [Cicer arietinum] gi|502124087|ref|XP_004498379.1| chr1 5979301 5985263 +
2 domain predictions
2 GO terms
Lj1g3v0492090.1
n.a. PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like isoform X1 [Cicer arietinum] gi|502126882|ref|XP_004499476.1| chr1 6477144 6482040 -
2 domain predictions
2 GO terms
Lj1g3v0492100.1
n.a. PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like isoform X1 [Cicer arietinum] gi|502126882|ref|XP_004499476.1| chr1 6478723 6482035 -
2 domain predictions
2 GO terms
Lj1g3v0502110.1
n.a. PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like isoform X1 [Cicer arietinum] gi|502126882|ref|XP_004499476.1| chr1 6506629 6509104 -
2 domain predictions
2 GO terms
Lj1g3v1399240.1
n.a. PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like [Glycine max] gi|356508876|ref|XP_003523179.1| chr1 17190834 17195935 -
2 domain predictions
2 GO terms
Lj1g3v1399240.2
n.a. PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like [Glycine max] gi|356516468|ref|XP_003526916.1| chr1 17190834 17195935 -
2 domain predictions
2 GO terms
Lj1g3v1868480.1
n.a. PREDICTED: probable glycosyltransferase At5g25310-like [Cicer arietinum] gi|502132418|ref|XP_004501350.1| chr1 22536605 22541075 -
2 domain predictions
2 GO terms
Lj1g3v2067540.1
n.a. PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] gi|356518344|ref|XP_003527839.1| chr1 24421005 24425103 +
2 domain predictions
2 GO terms
Lj1g3v2067550.1
n.a. PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] gi|356510025|ref|XP_003523741.1| chr1 24425575 24433329 +
2 domain predictions
2 GO terms
Lj1g3v3170070.1
n.a. PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Glycine max] gi|356523730|ref|XP_003530488.1| chr1 35914675 35915882 +
2 domain predictions
2 GO terms
Lj1g3v3975450.1
n.a. PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] gi|356571729|ref|XP_003554026.1| chr1 46837781 46840988 +
2 domain predictions
2 GO terms
Lj1g3v3975450.2
n.a. PREDICTED: probable glycosyltransferase At5g03795-like [Cicer arietinum] gi|502107152|ref|XP_004493174.1| chr1 46837781 46840988 +
2 domain predictions
2 GO terms
Lj1g3v4012890.1
n.a. PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Cicer arietinum] gi|502107379|ref|XP_004493246.1| chr1 47523017 47526283 +
2 domain predictions
2 GO terms
Lj1g3v4528390.1
n.a. PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Cicer arietinum] gi|502114802|ref|XP_004495055.1| chr1 53306786 53309927 -
2 domain predictions
2 GO terms
Lj1g3v4692870.1
n.a. PREDICTED: probable glycosyltransferase At5g03795-like [Cicer arietinum] gi|502111648|ref|XP_004494122.1| chr1 55706743 55715088 +
2 domain predictions
2 GO terms
Lj1g3v4692880.3
n.a. PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] gi|356570806|ref|XP_003553575.1| chr1 55710981 55714716 +
2 domain predictions
2 GO terms
Lj2g3v1456480.1
n.a. Exostosin-like protein [Medicago truncatula] gi|357485421|ref|XP_003612998.1| chr2 23034654 23039028 -
2 domain predictions
2 GO terms
Lj2g3v2017640.1
n.a. n.a. chr2 30939535 30945089 -
2 domain predictions
2 GO terms
Lj2g3v2659360.1
n.a. PREDICTED: probable glycosyltransferase At5g20260-like [Cicer arietinum] gi|502141110|ref|XP_004504449.1| chr2 35780794 35782022 +
2 domain predictions
2 GO terms
Lj3g3v1820590.1
n.a. PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Glycine max] gi|356564035|ref|XP_003550262.1| chr3 23100117 23103823 +
2 domain predictions
2 GO terms
Lj3g3v3053380.1
n.a. PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like [Glycine max] gi|356541948|ref|XP_003539434.1| chr3 38075885 38078523 +
2 domain predictions
2 GO terms
Lj3g3v3053380.2
n.a. PREDICTED: probable glucuronoxylan glucuronosyltransferase F8H-like [Cicer arietinum] gi|502145526|ref|XP_004506065.1| chr3 38084565 38085718 +
2 domain predictions
2 GO terms
Lj3g3v3201060.1
n.a. Exostosin family protein [Theobroma cacao] gi|508786756|gb|EOY34012.1| chr3 39574004 39575512 +
2 domain predictions
2 GO terms
Lj3g3v3639600.1
n.a. PREDICTED: probable glucuronoxylan glucuronosyltransferase F8H-like isoform X1 [Cicer arietinum] gi|502144159|ref|XP_004505598.1| chr3 44174748 44179294 +
2 domain predictions
2 GO terms
Lj3g3v3639600.2
n.a. PREDICTED: probable glucuronoxylan glucuronosyltransferase F8H-like isoform X1 [Cicer arietinum] gi|502144159|ref|XP_004505598.1| chr3 44174748 44179294 +
2 domain predictions
2 GO terms
Lj4g3v0654330.1
n.a. PREDICTED: probable glucuronosyltransferase Os04g0398600-like isoform X2 [Cicer arietinum] gi|502143317|ref|XP_004505296.1| chr4 10475138 10478883 +
2 domain predictions
2 GO terms
Lj4g3v1223870.1
n.a. PREDICTED: probable glycosyltransferase At5g03795-like isoform X3 [Cicer arietinum] gi|502152459|ref|XP_004508934.1| chr4 18352817 18363837 -
2 domain predictions
2 GO terms
Lj4g3v1893080.1
n.a. PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Cicer arietinum] gi|502151799|ref|XP_004508619.1| chr4 26810702 26824645 -
2 domain predictions
2 GO terms
Lj4g3v1893080.2
n.a. PREDICTED: probable glycosyltransferase At5g20260-like [Glycine max] gi|356565153|ref|XP_003550809.1| chr4 26810702 26814350 -
2 domain predictions
2 GO terms
Lj4g3v1893080.3
n.a. PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Cicer arietinum] gi|502151799|ref|XP_004508619.1| chr4 26821920 26824644 -
2 domain predictions
2 GO terms
Lj4g3v2335840.1
n.a. Xyloglucan galactosyltransferase KATAMARI1-like protein [Medicago truncatula] gi|357478759|ref|XP_003609665.1| chr4 32364967 32369333 -
2 domain predictions
2 GO terms
Lj4g3v2539330.1
n.a. PREDICTED: probable glycosyltransferase At3g07620-like [Cicer arietinum] gi|502141098|ref|XP_004504444.1| chr4 34201505 34205041 +
2 domain predictions
2 GO terms
Lj4g3v2871750.1
n.a. PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like [Glycine max] gi|356512936|ref|XP_003525170.1| chr4 38386570 38389787 -
2 domain predictions
2 GO terms
Lj4g3v3056180.1
n.a. PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] gi|356511373|ref|XP_003524401.1| chr4 40731236 40733872 -
2 domain predictions
2 GO terms
Lj5g3v1015010.1
n.a. PREDICTED: probable glycosyltransferase At5g03795-like isoform X1 [Cicer arietinum] gi|502124299|ref|XP_004498468.1| chr5 16529605 16536072 -
2 domain predictions
2 GO terms
Lj5g3v1873150.1
n.a. PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like, partial [Cicer arietinum] gi|502119998|ref|XP_004496813.1| chr5 26823732 26826809 +
2 domain predictions
2 GO terms