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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0279400 |
| Transcript ID | LotjaGi5g1v0279400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Caffeic acid O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I1LD68|I1LD68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0279400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59465011..59467874) extracted from Lotus japonicus Gifu genome v1.2.
CTAAGTTGTATATGGATTAGATGTTCGCTATAAAAAAGCATGACAAGAAATATAACCCATCACTCATTAGTCATTAGTAA TAGTCCATGGAATTAGAAGAAGTTATAAACTTACGAGAATTAAGTTACATTTTAGAACTTTAGAACCTAACCACTCTTTT CTCTCAAAAATCTGCTTCTTATTATTATACTATATACAATACACAATTATATACTACCAAAAAGCCCTTCACTGGGTACT ATGATTCCACTTGCGGGTTGACAGTTCTGGAATTATAACCATGGGTTTTGAAATTAAGGTGGGAGCCGTATAGCTAAGTG CCTTTGATGGCTAGCCTACAGAATTTTTGCTGGTTGGAATTGAGAATAAATTGCTGGTTGTATTTGATTGGGTTGTTGGT TAAACAGTGGATGTTTTGGATTTGTTTCTGGGACTGGTTGACTGGTTGTTATTTAGTTTGTGTGTGCTTTTCTTGCTTTG CTGCTTGTATTTGCTTTTATGCTTTTATTTTCCTACTAATTTATATTAAGGATTGGAGTACCTTGTACTTTCTTTTAATG CATTCTTTGGCTTATTATGAAAAAAACTTGCAAAACAAAAAAAAAGTTTTGCCTATATAAAGAACACTCTAGAGTAACTG CCAATGCCACTTAACTACTTAAGCAAGCAAGTAGAACATTAAGAGCAGTACTTGAGCTAAAAGTAGTCAAAATGGGAGAT TCCTATTCCACCAAAGATGAGCAGTTCAAAACTTCCCCTGAACAAACAGAGGATGCTGCTTGCTTATCAGCAATGCTGGC CTGTACCAATATAGTATACCCTGCAGTTCTGAATGCTGCAATTGAACTCAACTTGTTTGAGATCATAGCTAAGGCAACAC CACCTGGTGCCTTCATGTCACCCACTGAAATTGCTTCTAAGATCCCAACCCAACACTCAGATTTACCAAACAGGCTTGAA CGCATGCTGCGTTTGCTTGCAAGTTACTCCATTCTTACTTTCTCCACTCGCACCACTGAACATGGTAGCACTGAGAGAGT TTATGGGCTCTCCCAAGTTGGAAAATACTATGCCCCTGATGAAAGTCAGGGCTACTTGGCTTCCTTTGTTCCATTTCTCT ACTATCCACCACTGCTACAGGTTTGGTAAGTGCTTTTAGTTCATAATTACTTATGCTAGTTCACATGCTAAATTCTCTTG CTTCATTGTTCATAACTAAATTTATTTTCAGGTCGAACTTCAACGAAGCGGTGGTTGACGAAGACATTGATGTGTTTAAG AAACTTCATGGTGTGACCAAGTACCAGTACATGGAAAAGGATCAAAAAATGAACCAAATCTTTAACAAGGCAATGGTCGA TATCTGTGCAACAGAGATGAAAAGAATGCTTGCAATATATACTGGATTTGAGGGAATATCAACATTGGTTGATGTTGGAG GTGGACATGGACAAAATCTCAAAATGATAACCTCCAAGTACCCTTTGATAAAGGGTATCAATTTTGATCTGCCCCAAGTT ATTGAAAATGCACAATTGATTCCAGGTACCCTGATCAAGTATATAATGTTTTATATAAGAGTAATGAAATATGAAAACAC ACATTTTACTATACATATAACACACACATACTTCTCTAGCGATTATTAATGGTTGCAAACATTAACGACTGTTAAAGACT GCCGCTACACTGTATGTCGAAATGATGTCAACCAAAAGCTTATATTGGGGCATCATTTCCGTTTCTCTAATTACCATGAA CATGTGAAATGATAGAAGTTTTTTTTATAGGCAAATGTTAGTTGTTAGTAAATTAATTCATCCTTAGGGTTCGAACCCTT GACTCTTCACCCTTCATTCCTCTCAATCCTTATGTCCTCTAACTCTTACCATTTAAGCTAACTCTCGGGACATGTGAAAT GATATAAGTATACTTATTTTTTTAGTAATGTATTGTTTAAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAACTGTTC CCCATGGTGATGCCATAATACTCAAGGTAAGTAAGTACTATATACATATTAAATACCAATATATCTAACTCATTACTTGT GATTGATAGATTTAATTATCTAACCTCATTATATGATGCTAACAACAAACCTTTTAATTTCTTGACCTTGTTGATATGAC TGTAGGCTGTGTGCCATAATTGGTCAGATGAAAAATGTGTAGAATTTTTAAGCAATTGTCACAAAGCATTGTCACCAAAG GGGAAGGTGATTGTTGTGGAGTTTATATTGCCAGAAGAACCAAAAGCAACTGAAGAATCCCAACTTGTTTCTAGTCTCGA CAATATCATGTTCATCACAGCTGGTGGAAGGGAAAGGACTGAGAAACAGTTTGAGAATTTGTGCAAGCTCTCTGGATTTT CCAAATTTCAAGTTGCTTGTCGCGCTTTCTCTACTTTAGGAGTGATGGAATTCTATAAATAGGTTCATCACTCTAACCAA CCTCAAATATAAATAATTTGATATTAGGTAATCAACAATATTTAAGAACAAAAATTTAAATAAATTTTTATAAATGATAA TGTTGGTCCACTTAAAATTGAATTATTTATTAATTCCGAAGAATAAGTTAGAGAACTCTTAAAAGTTATGGTAATAGAGT AAAAGTGATAATAATGACCTTTATATGAGGCCAAAGTTACTTCTTGTACTTTTTTTTTTTTTTGCTTAATAATGACCTTT ATATGAGGCCAAAGTTACTTCTTGTACTTTATGCTTTGATGTGATATGTGATATGATGTAATTTTTCCAGTGTTATTAGT GAGTTCTTAATCTGTTAGTTCTCTACTGAACTACTTAATTAATCTAAGTTATTGCCTGCTGCGG
CDS sequence (LotjaGi5g1v0279400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGATTCCTATTCCACCAAAGATGAGCAGTTCAAAACTTCCCCTGAACAAACAGAGGATGCTGCTTGCTTATCAGC AATGCTGGCCTGTACCAATATAGTATACCCTGCAGTTCTGAATGCTGCAATTGAACTCAACTTGTTTGAGATCATAGCTA AGGCAACACCACCTGGTGCCTTCATGTCACCCACTGAAATTGCTTCTAAGATCCCAACCCAACACTCAGATTTACCAAAC AGGCTTGAACGCATGCTGCGTTTGCTTGCAAGTTACTCCATTCTTACTTTCTCCACTCGCACCACTGAACATGGTAGCAC TGAGAGAGTTTATGGGCTCTCCCAAGTTGGAAAATACTATGCCCCTGATGAAAGTCAGGGCTACTTGGCTTCCTTTGTTC CATTTCTCTACTATCCACCACTGCTACAGGTTTGGTAA
Protein sequence (LotjaGi5g1v0279400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDSYSTKDEQFKTSPEQTEDAACLSAMLACTNIVYPAVLNAAIELNLFEIIAKATPPGAFMSPTEIASKIPTQHSDLPN RLERMLRLLASYSILTFSTRTTEHGSTERVYGLSQVGKYYAPDESQGYLASFVPFLYYPPLLQVW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 145 | 129 | 1.9E-56 | – | |
| PANTHER | 17 | 145 | 129 | 1.9E-56 | – | |
| SUPERFAMILY | 21 | 124 | 104 | 7.07E-27 | ||
| ProSiteProfiles | 28 | 145 | 118 | 16.559 | ||
| Gene3D | 33 | 145 | 113 | 1.2E-43 | ||
| Pfam | 39 | 90 | 52 | 1.2E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi5g1v0279400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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