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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR036390
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We have found 378 results. Now displaying 1 of 8 with 50 rows per page. This search has taken 6.228s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. O-methyltransferase, putative; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P28002|COMT1_MEDSA Caffeic acid 3-O-methyltransferase; TrEMBL-Plants: tr|I3SH20|I3SH20_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0005500 LjG1.1_chr1 864921 868292 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K3B3|G7K3B3_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0045100 LjG1.1_chr1 6128055 6133346 +
n.a. Heat shock transcription factor; TAIR: AT1G46264.1 heat shock transcription factor B4; Swiss-Prot: sp|Q7XHZ0|HFB4B_ORYSJ Heat stress transcription factor B-4b; TrEMBL-Plants: tr|A0A0L9UVT9|A0A0L9UVT9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0052100 LjG1.1_chr1 7354422 7356970 +
n.a. La-related protein; TAIR: AT5G21160.2 LA RNA-binding protein; Swiss-Prot: sp|Q940X9|LRP1A_ARATH La-related protein 1A; TrEMBL-Plants: tr|A0A0B2S1Z3|A0A0B2S1Z3_GLYSO La-related protein; Found in the gene: LotjaGi1g1v0055600 LjG1.1_chr1 7828557 7836943 +
n.a. La-related protein; TAIR: AT5G21160.2 LA RNA-binding protein; Swiss-Prot: sp|Q940X9|LRP1A_ARATH La-related protein 1A; TrEMBL-Plants: tr|A0A0B2S1Z3|A0A0B2S1Z3_GLYSO La-related protein; Found in the gene: LotjaGi1g1v0055600 LjG1.1_chr1 7828565 7836943 +
n.a. HMG-Y-related protein A; TAIR: AT1G14900.1 high mobility group A; Swiss-Prot: sp|Q00423|HMGYA_SOYBN HMG-Y-related protein A; TrEMBL-Plants: tr|A0A1J7HLR9|A0A1J7HLR9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0092300 LjG1.1_chr1 13568955 13570373 -
n.a. O-methyltransferase; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|B6VJS4|ROMT_VITVI Trans-resveratrol di-O-methyltransferase; TrEMBL-Plants: tr|I3SKV8|I3SKV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0109900 LjG1.1_chr1 17171747 17173636 -
n.a. O-methyltransferase; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|B6VJS4|ROMT_VITVI Trans-resveratrol di-O-methyltransferase; TrEMBL-Plants: tr|I3SKV8|I3SKV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0110800 LjG1.1_chr1 17279521 17281447 -
n.a. O-methyltransferase; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|B6VJS4|ROMT_VITVI Trans-resveratrol di-O-methyltransferase; TrEMBL-Plants: tr|I3SKV8|I3SKV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0110900 LjG1.1_chr1 17282873 17284633 -
n.a. O-methyltransferase; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|B6VJS4|ROMT_VITVI Trans-resveratrol di-O-methyltransferase; TrEMBL-Plants: tr|I3SKV8|I3SKV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0111000 LjG1.1_chr1 17303319 17306678 -
n.a. electron protein, putative (Protein of unknown function, DUF547); TAIR: AT4G08550.2 electron carrier/ protein disulfide oxidoreductase; Swiss-Prot: sp|Q5AW24|IML1_EMENI Vacuolar membrane-associated protein iml1; TrEMBL-Plants: tr|A0A1J7HL05|A0A1J7HL05_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0150000 LjG1.1_chr1 25768004 25774927 -
n.a. E2F transcription factor; TAIR: AT3G48160.2 DP-E2F-like 1; Swiss-Prot: sp|Q8LSZ4|E2FE_ARATH E2F transcription factor-like E2FE; TrEMBL-Plants: tr|A0A0S3RGB4|A0A0S3RGB4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0184200 LjG1.1_chr1 36043233 36047921 -
n.a. Protein serine/threonine kinase; TAIR: AT3G51270.1 protein serine/threonine kinase; Swiss-Prot: sp|Q54T05|RIO2_DICDI Serine/threonine-protein kinase rio2; TrEMBL-Plants: tr|I1MZH4|I1MZH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0187700 LjG1.1_chr1 36746824 36756507 -
n.a. Protein serine/threonine kinase; TAIR: AT3G51270.1 protein serine/threonine kinase; Swiss-Prot: sp|Q54T05|RIO2_DICDI Serine/threonine-protein kinase rio2; TrEMBL-Plants: tr|I1MZH4|I1MZH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0187700 LjG1.1_chr1 36746839 36756528 -
n.a. Protein serine/threonine kinase; TAIR: AT3G51270.1 protein serine/threonine kinase; Swiss-Prot: sp|Q54T05|RIO2_DICDI Serine/threonine-protein kinase rio2; TrEMBL-Plants: tr|I1MZH4|I1MZH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0187700 LjG1.1_chr1 36746998 36754708 -
n.a. Protein serine/threonine kinase; TAIR: AT3G51270.1 protein serine/threonine kinase; Swiss-Prot: sp|Q54T05|RIO2_DICDI Serine/threonine-protein kinase rio2; TrEMBL-Plants: tr|K7LRG4|K7LRG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0187700 LjG1.1_chr1 36747343 36754415 -
n.a. ATP-dependent RNA helicase; TAIR: AT5G61140.2 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9FNQ1|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14; TrEMBL-Plants: tr|K7KW51|K7KW51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0188900 LjG1.1_chr1 37051485 37100406 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G61140.2 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9FNQ1|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14; TrEMBL-Plants: tr|A0A0B2Q999|A0A0B2Q999_GLYSO Activating signal cointegrator 1 complex subunit 3; Found in the gene: LotjaGi1g1v0188900 LjG1.1_chr1 37051695 37095471 +
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi1g1v0205000 LjG1.1_chr1 44306403 44310233 +
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi1g1v0205100 LjG1.1_chr1 44319380 44333436 +
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi1g1v0205100 LjG1.1_chr1 44319438 44333123 +
n.a. HORMA domain-containing protein 1; TAIR: AT1G67370.1 DNA-binding HORMA family protein; Swiss-Prot: sp|F4HRV8|ASY1_ARATH Meiosis-specific protein ASY1; TrEMBL-Plants: tr|K7MP87|K7MP87_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0220600_LC LjG1.1_chr1 49042532 49050185 +
n.a. HORMA domain-containing protein 1; TAIR: AT1G67370.1 DNA-binding HORMA family protein; Swiss-Prot: sp|F4HRV8|ASY1_ARATH Meiosis-specific protein ASY1; TrEMBL-Plants: tr|G7JBZ6|G7JBZ6_MEDTR Meiotic asynaptic mutant protein; Found in the gene: LotjaGi1g1v0220600_LC LjG1.1_chr1 49042707 49048241 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UCJ6|A0A072UCJ6_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0233100 LjG1.1_chr1 54798455 54809069 +
n.a. electron protein, putative (Protein of unknown function, DUF547); TAIR: AT4G08550.2 electron carrier/ protein disulfide oxidoreductase; Swiss-Prot: sp|Q8TB45|DPTOR_HUMAN DEP domain-containing mTOR-interacting protein; TrEMBL-Plants: tr|A0A0B2PNK6|A0A0B2PNK6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0248200 LjG1.1_chr1 59634276 59638914 -
n.a. O-methyltransferase; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|B6VJS4|ROMT_VITVI Trans-resveratrol di-O-methyltransferase; TrEMBL-Plants: tr|I1JJX3|I1JJX3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0268900 LjG1.1_chr1 65540271 65550352 +
n.a. O-methyltransferase, putative; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P28002|COMT1_MEDSA Caffeic acid 3-O-methyltransferase; TrEMBL-Plants: tr|I3SJD0|I3SJD0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0299800 LjG1.1_chr1 72490351 72495474 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77592516 77602886 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77592516 77603139 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77596012 77603018 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q9FI14|TAO1_ARATH Disease resistance protein TAO1; TrEMBL-Plants: tr|A0A151T389|A0A151T389_CAJCA TMV resistance protein N; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77596016 77602341 -
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|Q557M8|T2EA_DICDI General transcription factor IIE subunit 1; TrEMBL-Plants: tr|A0A0S3R7K1|A0A0S3R7K1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0346400 LjG1.1_chr1 81348914 81358145 -
n.a. Heat shock transcription factor; TAIR: AT1G46264.1 heat shock transcription factor B4; Swiss-Prot: sp|Q9C635|HSFB4_ARATH Heat stress transcription factor B-4; TrEMBL-Plants: tr|G7J6F2|G7J6F2_MEDTR Heat shock transcription factor; Found in the gene: LotjaGi1g1v0355900 LjG1.1_chr1 82773625 82775575 -
n.a. Heat shock transcription factor; TAIR: AT2G26150.1 heat shock transcription factor A2; Swiss-Prot: sp|P41152|HSF30_SOLPE Heat shock factor protein HSF30; TrEMBL-Plants: tr|I1JTX5|I1JTX5_SOYBN Heat shock transcription factor HSFA2; Found in the gene: LotjaGi1g1v0367500 LjG1.1_chr1 84550386 84555331 +
n.a. Replication protein A 32 kDa subunit-like protein; TAIR: AT2G24490.1 replicon protein A2; Swiss-Prot: sp|Q9ZQ19|RFA2A_ARATH Replication protein A 32 kDa subunit A; TrEMBL-Plants: tr|I3SHT3|I3SHT3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0393200 LjG1.1_chr1 87774747 87780576 -
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88432059 88435947 +
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434121 88435613 +
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434122 88435613 +
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434145 88435613 +
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434181 88435613 +
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434345 88435613 +
n.a. La protein like; TAIR: AT4G32720.2 La protein 1; Swiss-Prot: sp|Q93ZV7|LA1_ARATH La protein 1; TrEMBL-Plants: tr|I1K995|I1K995_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0400000 LjG1.1_chr1 88736591 88740914 +
n.a. Transcription initiation factor IIF subunit beta; TAIR: AT1G75510.1 Transcription initiation factor IIF, beta subunit; Swiss-Prot: sp|O94424|T2FB_SCHPO Transcription initiation factor IIF subunit beta; TrEMBL-Plants: tr|I3T827|I3T827_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0424300 LjG1.1_chr1 91883797 91891132 -
n.a. Transcription initiation factor IIF subunit beta; TAIR: AT1G75510.1 Transcription initiation factor IIF, beta subunit; Swiss-Prot: sp|O94424|T2FB_SCHPO Transcription initiation factor IIF subunit beta; TrEMBL-Plants: tr|I3T827|I3T827_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0424300 LjG1.1_chr1 91885016 91891038 -
n.a. Transcription factor; TAIR: AT1G47870.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FV70|E2FC_ARATH Transcription factor E2FC; TrEMBL-Plants: tr|A0A151TCJ9|A0A151TCJ9_CAJCA Transcription factor E2F4; Found in the gene: LotjaGi1g1v0428700 LjG1.1_chr1 92370291 92375112 -
n.a. La-related; TAIR: AT4G35890.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q94K80|LRP1C_ARATH La-related protein 1C; TrEMBL-Plants: tr|A0A151RUU0|A0A151RUU0_CAJCA La-related protein 1B; Found in the gene: LotjaGi1g1v0431200 LjG1.1_chr1 92616619 92621188 -
n.a. 26S proteasome regulatory subunit; TAIR: AT1G20200.1 PAM domain (PCI/PINT associated module) protein; Swiss-Prot: sp|P93768|PSMD3_TOBAC Probable 26S proteasome non-ATPase regulatory subunit 3; TrEMBL-Plants: tr|I1K7H0|I1K7H0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0431400 LjG1.1_chr1 92636379 92640580 -
n.a. 26S proteasome regulatory subunit; TAIR: AT1G20200.1 PAM domain (PCI/PINT associated module) protein; Swiss-Prot: sp|P93768|PSMD3_TOBAC Probable 26S proteasome non-ATPase regulatory subunit 3; TrEMBL-Plants: tr|I3S3W2|I3S3W2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0431400 LjG1.1_chr1 92636961 92639526 -
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700 LjG1.1_chr1 99888869 99892109 -
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700 LjG1.1_chr1 99889637 99890960 -