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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0309200 |
Transcript ID | LotjaGi5g1v0309200.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Argonaute family protein; TAIR: AT5G43810.1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase; Swiss-Prot: sp|Q9XGW1|AGO10_ARATH Protein argonaute 10; TrEMBL-Plants: tr|V7BBW8|V7BBW8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0309200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:62739741..62747587) extracted from Lotus japonicus Gifu genome v1.2.
TCTCTATCTCTTTCTTTGTGTGCTGTGTGTATATTATTATTATTCAATTTTCATACTTTTTGCTTTTTGGTTTGCATATA TCAATTTATGGGCATGGTACATCCCCGAGGCTGCGCAAAGCAGAGAGAGGAGGCAACTTTAAAAGCAAAGAGGCAGGGAA AGCCTTTTACACGTGATAAAGAAAGAACCAAAAGTGCTTTGCATGCGTGTGTAAGATCATCATCATCATCACTCTTTCCT TCACTTTCCTTTCTTCTTCCTTCAACGATTCTGAATCTTCCACCACCCTCTCTACTATTTCTACCCCCTCACTCACTCCT TCAAGCTCCTTCCTTTGTTAAACAAGTCAAACAAGGTGAGTTCAACTTCAGTTTTTTGCTTTGTTTCTTCATTTTCATGG TCATGATCATTGCTTAATGGTTTCTTTTTTTCAGTTTTTGTTTTGGCTTCCTTTAACTTCAAGACAAATAATTTATTAGA CAACATTTTGTTCTGCAGTGCTGCATTCTTTCTTATTACTGAAAATCTTTCACATAATGATTTTGCTTCCTTCCTTGGTT TTTGTTTTCTTCTGCTTGTTTTTTTTCATCAATTTCATGGCAGTGCTGTATAATGCAGGCTTCAAATTTGTCTTCACAAT CCATTACATTGTTCTATTGTTTTTCCCAAGTGTTCTCTCATGTGTCTGTATCTACTCGTCGTCTTTGTAACTTTCAGTTT TTTGGTTGGGGACAAGCCTACTAGGAAATGGTCTTGTCTTCTGGGTATTTCAATTTTCTGGGGTTCCACAAGTCTCATCA TATTTTATTTTCTGGCTTGCTCACTGAACAATCCATTTCTTCTTTTTTGCTTTTTTGTCTCTTGCACTGAGATTTCATTG TCTTGTGGCCTTTTTAAATTTAACCACAGCAATGTTGTTGTACAAATTCACTGTTTCTTGCCTTATTTTGATATATGGTT TTCTATACTTTTTTACTTTCATTACCATTTTTGAATTTTGTTTGCTTGCTGAAACAACTGTGAAAAGTCTGGATTTTCAG TTTTGCACCAGAATGGTAATGCTTGTATTATTAAACAATTGCCAGTTTTCAGTTTCATCCATGCTATTTTTCCCTCAAAC TTGATACATCAAATCATTGTGTGTTCTCATCAATGTACAGTAGTTACTAACTCAATTACGTTTTCTGTATTTTGCAGCTG AAGCAATTGGTACTGTTTGGAAGGTGTTTGAAGCAAAAGCTAAAAGAGAAATTGGTGCTTTTTTGCATTTTACATTGATT CCAGTTTAAGTACTCATCAATAAAAGCTAACAACATGCCATTGAGGCAGATGAAAGAAGGGTCTGAGCAACACCTAGTGA TCAAACCCCATTTGCAGAACCAGAACCCCATGTGTACTCCAGCTAAGAAGGTACCGAAAGCTACTACCCAAAATGGCCAA GGTCCATCACCACCTCAAGAAAACCATAGCCAAACTTCACCTCACCCAAGGAACAAGGGAAGGAGAAGGGGCAGAGGAGG CAGAAAATGTGATCAAGGTGATGTTTTGATGAGGCCTAGTTGCAGGCCTTGCACTGCAACAAGTTCTTCTGCAAATGGAA ATGTTCAAAATGGCTACACCTCTGGGAATGTAGATATGGGTTTTCCTACTTCAAGCAAGTCTTTAAGCTTTGCTCGTAGA CCTGGATTTGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAA CCAATATGATGTAAGATCCTTTTCATTGGTATTTAGTATTTACCATTCTACTGAAAGAGCTATTAAGTTAGATTTTTCTA AGTGGCATAACGATTGGGCCCTCTTTGGCAGCATGCATTTAATTCATCCTGTGATTTTTCCTATTATAGGGGTTCTGCTT TTGCAGTCCTTTTCTTCTAGTGTCATTAATTGAGGCCTGAGGCTTTTGTTCCTATTGTTGCTTTTGCTTTAATTTAATTA ATGCCTTTCTGTTATGTGTTGGTTTTACTTTGAAGGTTACTATTACCCCGGAAGTGTCTTCAAGAGCAGTAAATAGGTCC ATTATAGCTGAACTTGTGAGGCTGTATAAAGAGTCTGACTTAGGGATGAGACTTCCTGCATATGATGGCAGGAAAAGTCT GTACACTGCAGGGCAGCTTCCATTTGCTTGGAGAGAATTTAAGATTAAGCTTGTAGATGAACAAGATAGAGTAAATGTCC CCAAGTAAGGATTTATTGTTCATAATCATTCAAACATTTTCCCTTTTTTCTCAGTACATGTTTGGACAAACTTCTATAGT TGATTCTAAAGCCTAAATCAAGTCTGAGGAGGAGCTTGTGCCAGTAGCTTCTAAGTCTCATAATTGATTCTTATAAAAGA GAAAGGTGATCCAGATCAATTCATGAAGAAATAAATAACACAAGATAAAATCATAATAATTTTGACTTATTTGAATTAGT TCAATTTCAATTGACACTTTGGCCATCTTTCAGAAGGGAAAGAGAGTACAATGTGGTGATAAAGTTTGTTGCTCGGGCAA ACTTGCATCACTTAGGTCAGTTTCTAGCTGGTAAGCGTGCTGATGCACCGCAGGAGGCACTTCAAATTCTTGACATTGTT CTGAGAGAGCTGTCGAATAAGAGGTAGTGATAGTGATGAGAATCTGAAATTTTAAAATTAACAAGAAATGATAAATTGAA TGAGAATATGAAGCTTAAGTTCTTGTTTATCTTACGAAAACTGCATTTTCTAAAGGTATTGTCCCATTGGGAGGTCCTTC TTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGGGATTGGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCC TACTCAGATGGGCCTTTCCCTCAATATTGGTATATTAGTTACTACATTAATTATATAGTATAAATAGTCTAATGAAACTA CAATTCAACTTTTTCATTTCTCTTCACTTCTTGCATTTTGCAGATATGGCATCTGCTGCATTCATTGAACCTCTTCCAGT AGTAGAGTTTGTTGGCCAACTATTAGCAAAAGATGTGTTGTCAAGGCCGTTGTCAGATGCTGATCGCATTAAGGTACTTA GTTATATGGACATAGCTTACGGATTTCTTCTTCTATGTTGTCAATATTAGTCAATTTATAGCGCTACTTTTTTTTTATGT CTAACAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGAAGTGTGAGAAGAAAATATCGTGTTT CTGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTAAGTTGTTTTTCTAATTGTTCTCTTCCCACTAAAAATCAAAACA GTTATAATGATTTTCATTTAATCACTGTTTTTCTTTAGGTTTCCTGTTGATGAGAACTCAACTATGAAGTCAGTTGTTGA ATACTTCCAAGAGATGTATGGTTTCACTATTCAATATGCTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCTA ACTATTTACCTATGGAGGTAGGGAAAGTTCCTGGTAGTTGAAGAACCATTCAATGTCATAATGTTTTTGTCTTATTCCCA TGTGCTTTTGGTTTCCAGGCCTGCAAAATTGTTGAGGGGCAACGCTATACAAAGAGATTGAATGAGAAGCAAATTACTTC TCTGTTGAAAGTTACTTGCCAGAGACCTCGTGATCGGGAAAATGACATTTTACAGGTATTCAATTTCACACTTTCACAAT AAAGATTGTACTGACCTCTAATAGCAGAAAAATTAGGAAATGAAGGGTCATTAAGCTAGCATTCTTTTCCAGGATTTATT CTGGAAGTACTTAGCAAATTTATCTTCTAGTCATCATGTGTATAACAATGTAGTAATTGGAATGTTTAGATAATGGTTCA AAACTTGTGAAGATCTTGTGGGGCTAATGTAATCTTAAATTACACTACTATGATTTTGTGATACTTGCTTGTGTGGGGGA GGGGTTATTAAGTTAGCTACATGCTGTTAATGTTGTGCATTCATATTGATTATTCATGTATTTATTTATTTTATTTTGTG TGGTGGTCATGGGGGTTATACAAGCAGACCGTTCAACATAATGCTTATGACCAAGATCCTTATGCAAAGGAATTTGGATT GAATATCAGTGAAAAGCTAGCTTCTGTCGAAGCACGGATTCTTCCTGCCCCATGGGTATTGTGCTTTTCCTTATTAAGAT CTGGTTTGTCATATATCGAAAATGTTTATCTTTTTCCAACTGTTCACTGATTTAAGAGGCACTTCTAACTGCAGCTTAAA TATCATGAAAGTGGGAAAGAGAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGGTATCGTTTGTTGG CATTATATTTTTCTGTTCTATAGTAATTGTCAAATGGAACTGTTAGTGCCCGAGTGTCTAGTTTAATATAACTTTGGCTG TAAAATTTTCTCATATTTCATCTATTCTTTTGCTACTAGTCATATGCTAAACAACAGAAAAAAGAAAGTAAAATGATGTT ATTATAAATGAATCCCTTTATAAGGTATCTGCTAGCCTTGTTATTTTCTGTGATAGCTTGTATTACTGATATCTTTTTCT CCTATTTCTTGAATGGCGCAGAAAATGATTAATGGAATGACTGTTAACCGGTGGGCATGCATAAATTTTTCACGGAGCGT GCAAGATAGTGTTGCTCGCACTTTCTGTAATGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGTAGTTATTACATTTT TTTAGGTGTTTGAAGTGCATAAAGAAATTTCTGGTACTCAATAACATGACTTTTTTCTTGTAGGAATTTAACCCAGAGCC TGTTATTCCCATCTACAATGCCAAGCCTGAGCAGGTGGTGAAAGCTTTGAAGCATGTTTACCATGTTTCGTCAAACAAAA CTAAAGGAAAGGAATTGGAGCTGTTGTTAGCAATATTACCAGACAATAATGGGTCTCTCTATGGTAAGCAAACATAGGTT GATAATCAAGTCTGCAAGATTGTGCTATGTTATTAATCATTGATTGCTATTTGCTGGCTTGACAGAACGACGAAGATATA TTCCAGCTTAAAATGCAGAATTTTCATTGAAATGACTTGTGTTTTCAGGTGATCTCAAGCGTATATGTGAAACTGACCTG GGTTTAATTTCACAATGCTGTCTGACAAAGCATGTCTTTAAAATCACTAAACAGTACTTGGCTAATGTGTCTCTGAAGAT CAACGTTAAGGTTTGTTTGCTCTCAATCACAGGAAATTGCATATTCCTGTGTAAGACATGGTTAAAAGTTTAGTATGAAT TTCAGTTACTTGTTAGACAATTCCCCTCCCTTTTTTTCTCTGTTATTGCATGAATAATCTAATTTTTTTTAACAAATTCA TGGCCACTATTTACCAAGTTTTGGCAAAATCAAATTCATGATGTACTCATGTAATCTTATTTTTCATTAGTCAACTTTAG GCTTCCCTACTGTTTGAATATTCATGTTAAAATTGCTCACTTGTCATAAATGCTTCCAATAAGTAAATAGTGGTCTCCTT GTTGCAGATGGGAGGTAGAAACACTGTTCTTCTTGATGCTTTGAGCTGCAGGATACCATTGGTTAGTGACATACCAACCA TAATTTTTGGAGCAGATGTCACCCACCCTGAAAATGGAGAAGACTCTAGCCCCTCAATTGCAGCTGTACTTATCTAATCT ATTTATCTTATTATCATTAATTTTTTAAAGCATTGCGTTAGTTAATTAGAGTTTCAGAAACTGATGTGTTATTCAATCTA TAGGTTGTAGCATCCCAGGACTGGCCTGAAGTGACGAAATATGCTGGTTTAGTGTGTGCTCAAGCTCATAGACAAGAACT TATACAAGATTTGTACAAAACTTGGCAGGACCCTGTTCGCGGCACAGTTAGTGGTGGCATGATAAGGTAAAAATACTACG TACTTTAATTTTCTAATTCTGAATGTTGTTCTTGGTTGTGTGATGGGATCTCTTTGCAGTTTGTTTCAGTATTTCATTTT CGCACGTTCTTTTTGTGCAGAGACTTACTGGTTTCCTTTAGAAAGGCGACAGGACAAAAGCCACTACGAATTATATTTTA CAGGTCCTTATGTTTAATTTATGATGCTAGATCATCAGTGTATGTTTAATTTGAAGTCACCAGCGTGTTAACCGTAAAAT TTTGAACAGGGATGGTGTAAGCGAGGGGCAATTTTACCAAGTATTACTTTATGAGTTGGACGCAATCCGGAAGGTCAGAG TCATTTACTTTCTGTTATGGAGTTATCATAAGTTTGTATTCTTTAAAATATGTTCTGATAAGAAATATCTATGCAGGCAT GTGCGTCCTTGGAGCCAAACTATCAGCCTCCGGTAACTTTCATAGTTGTACAAAAAAGACACCATACTCGGTTATTCCCA AACAACCACAAGGACAGGAGCAGTACAGATAAGAGTGGGAACATAATGCCTGGTATGTTGAACATTCCTTAATGCTTATG TACACAAATGTGTTTTTAATAATGATTGTCAAATAAAATTAAAGTCTTGTTATATATTGCCTTTCAGGGACTGTTGTTGA TTCTAAAATCTGCCATCCAACGGAATTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGTAGAAAATAGTTTTTAGT ATGGTTCTGATCTGGGGACCAAAAGTGCAATTAATTCTATTTGATTTTAGCATGGATGTTAAACATGAATCCAAAGTAAA ACTTCCGTCTAAACCTTTGATTTTCTTAACTGTGAATACTGTGTTTCCATTACCGTGCAGGGTACTAGTCGACCTGCTCA TTATCATGTTCTATGGGACGAAAACAACTTCACAGCAGATGGAATTCAGTCTTTGACCAACAATCTTTGTTATACATATG CGAGGTGTACACGCTCCGTGTCCGTTGGTAAGCCTATGTTTCAACTAGTATGCAGTTTTTCAGTTATTGCTCACAGTAAT GAATCTTGAAGCCTTGCCTTACCCTTTATGACTAGTTCAAGAAGCTATGATGTTTCTAGTATTTACATCATGAGTGAGCT TTAACCTGATTATATTTATCTTTGTTGGAGTTTCAACTTGTTTCGGACAATTTAAAACTCAATTGGCTGAAAATCTAATC TTTTTGTGCAGTTCCTCCAGCATATTATGCACATTTAGCAGCTTTTCGAGCCCGTTTCTATATGGAACCAGATATGCAAG AGAATGGCTCTTCAGGTGACGGTAACACTAGTAACAGCTCCAAGGGGACACGAGTAGCTGGAGAGTGTGGTGTTAAGCCA TTGCCAGCCTTGAAAGAAAATGTGAAGAGAGTGATGTTTTACTGTTAGACTTGGAATTGGTAGATGATAGAGCATCAAAT AGTAGAAAACTGGAACAATCATTGAATGCAGTGCTCACTTCAGATTAGCATGTACATTAGTCGCGGTTCATGCATAGCGG TCAGGTTTCCTGTGATAGATTCACGTAGGTTTGGTTTCATGGTGAAATGTTGAAGAATCACTTATAGTTGGAAATTAAAA ATTACAAGACTTAGCTTTTGAAGAACCTTGGAAACCAATCACCAACTTAGTTTAGAGTTCCTAGAAGTATTAGGTTTTAT AGATATTGTAAAAGTTGGCATTGTAAAGAATGTTCTATCAGTCTTCATTGTAGAAAATTTTGCCTGAAGATCTTTCTAAC ATAGAAATTTCCCACTTCATTTTTCAATGAGGGGAAGTTTCATCTCATTAGTTTTGCAATATAATTAGCCAACATTCACG TTTACTC
CDS sequence (LotjaGi5g1v0309200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCATTGAGGCAGATGAAAGAAGGGTCTGAGCAACACCTAGTGATCAAACCCCATTTGCAGAACCAGAACCCCATGTG TACTCCAGCTAAGAAGGTACCGAAAGCTACTACCCAAAATGGCCAAGGTCCATCACCACCTCAAGAAAACCATAGCCAAA CTTCACCTCACCCAAGGAACAAGGGAAGGAGAAGGGGCAGAGGAGGCAGAAAATGTGATCAAGGTGATGTTTTGATGAGG CCTAGTTGCAGGCCTTGCACTGCAACAAGTTCTTCTGCAAATGGAAATGTTCAAAATGGCTACACCTCTGGGAATGTAGA TATGGGTTTTCCTACTTCAAGCAAGTCTTTAAGCTTTGCTCGTAGACCTGGATTTGGACAAGTTGGGACAAAATGCATTG TGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAATATGATGTTACTATTACCCCGGAAGTGTCT TCAAGAGCAGTAAATAGGTCCATTATAGCTGAACTTGTGAGGCTGTATAAAGAGTCTGACTTAGGGATGAGACTTCCTGC ATATGATGGCAGGAAAAGTCTGTACACTGCAGGGCAGCTTCCATTTGCTTGGAGAGAATTTAAGATTAAGCTTGTAGATG AACAAGATAGAGTAAATGTCCCCAAAAGGGAAAGAGAGTACAATGTGGTGATAAAGTTTGTTGCTCGGGCAAACTTGCAT CACTTAGGTCAGTTTCTAGCTGGTAAGCGTGCTGATGCACCGCAGGAGGCACTTCAAATTCTTGACATTGTTCTGAGAGA GCTGTCGAATAAGAGGTATTGTCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGG GATTGGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCATCT GCTGCATTCATTGAACCTCTTCCAGTAGTAGAGTTTGTTGGCCAACTATTAGCAAAAGATGTGTTGTCAAGGCCGTTGTC AGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGAAGTGTGAGAAGAA AATATCGTGTTTCTGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGAGAACTCAACTATGAAGTCA GTTGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTCAATATGCTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAA GAAGGCTAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGCTATACAAAGAGATTGAATGAGAAGCAAA TTACTTCTCTGTTGAAAGTTACTTGCCAGAGACCTCGTGATCGGGAAAATGACATTTTACAGACCGTTCAACATAATGCT TATGACCAAGATCCTTATGCAAAGGAATTTGGATTGAATATCAGTGAAAAGCTAGCTTCTGTCGAAGCACGGATTCTTCC TGCCCCATGGCTTAAATATCATGAAAGTGGGAAAGAGAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACA AGAAAATGATTAATGGAATGACTGTTAACCGGTGGGCATGCATAAATTTTTCACGGAGCGTGCAAGATAGTGTTGCTCGC ACTTTCTGTAATGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAACCCAGAGCCTGTTATTCCCATCTACAA TGCCAAGCCTGAGCAGGTGGTGAAAGCTTTGAAGCATGTTTACCATGTTTCGTCAAACAAAACTAAAGGAAAGGAATTGG AGCTGTTGTTAGCAATATTACCAGACAATAATGGGTCTCTCTATGGTGATCTCAAGCGTATATGTGAAACTGACCTGGGT TTAATTTCACAATGCTGTCTGACAAAGCATGTCTTTAAAATCACTAAACAGTACTTGGCTAATGTGTCTCTGAAGATCAA CGTTAAGATGGGAGGTAGAAACACTGTTCTTCTTGATGCTTTGAGCTGCAGGATACCATTGGTTAGTGACATACCAACCA TAATTTTTGGAGCAGATGTCACCCACCCTGAAAATGGAGAAGACTCTAGCCCCTCAATTGCAGCTGTTGTAGCATCCCAG GACTGGCCTGAAGTGACGAAATATGCTGGTTTAGTGTGTGCTCAAGCTCATAGACAAGAACTTATACAAGATTTGTACAA AACTTGGCAGGACCCTGTTCGCGGCACAGTTAGTGGTGGCATGATAAGAGACTTACTGGTTTCCTTTAGAAAGGCGACAG GACAAAAGCCACTACGAATTATATTTTACAGGGATGGTGTAAGCGAGGGGCAATTTTACCAAGTATTACTTTATGAGTTG GACGCAATCCGGAAGGCATGTGCGTCCTTGGAGCCAAACTATCAGCCTCCGGTAACTTTCATAGTTGTACAAAAAAGACA CCATACTCGGTTATTCCCAAACAACCACAAGGACAGGAGCAGTACAGATAAGAGTGGGAACATAATGCCTGGGACTGTTG TTGATTCTAAAATCTGCCATCCAACGGAATTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACTAGTCGACCT GCTCATTATCATGTTCTATGGGACGAAAACAACTTCACAGCAGATGGAATTCAGTCTTTGACCAACAATCTTTGTTATAC ATATGCGAGGTGTACACGCTCCGTGTCCGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCTTTTCGAGCCCGTTTCT ATATGGAACCAGATATGCAAGAGAATGGCTCTTCAGGTGACGGTAACACTAGTAACAGCTCCAAGGGGACACGAGTAGCT GGAGAGTGTGGTGTTAAGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGAGTGATGTTTTACTGTTAG
Protein sequence (LotjaGi5g1v0309200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLRQMKEGSEQHLVIKPHLQNQNPMCTPAKKVPKATTQNGQGPSPPQENHSQTSPHPRNKGRRRGRGGRKCDQGDVLMR PSCRPCTATSSSANGNVQNGYTSGNVDMGFPTSSKSLSFARRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVS SRAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLVDEQDRVNVPKREREYNVVIKFVARANLH HLGQFLAGKRADAPQEALQILDIVLRELSNKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMAS AAFIEPLPVVEFVGQLLAKDVLSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKS VVEYFQEMYGFTIQYAHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPRDRENDILQTVQHNA YDQDPYAKEFGLNISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQDSVAR TFCNELAQMCQVSGMEFNPEPVIPIYNAKPEQVVKALKHVYHVSSNKTKGKELELLLAILPDNNGSLYGDLKRICETDLG LISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDALSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQ DWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYEL DAIRKACASLEPNYQPPVTFIVVQKRHHTRLFPNNHKDRSSTDKSGNIMPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP AHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSSGDGNTSNSSKGTRVA GECGVKPLPALKENVKRVMFYC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 91 | 91 | - | – | |
MobiDBLite | 16 | 55 | 40 | - | – | |
PANTHER | 99 | 982 | 884 | 0.0 | – | |
PANTHER | 99 | 982 | 884 | 0.0 | – | |
Pfam | 131 | 265 | 135 | 2.9E-31 | ||
SMART | 274 | 326 | 53 | 4.6E-24 | ||
Pfam | 275 | 324 | 50 | 1.1E-19 | ||
Gene3D | 320 | 445 | 126 | 4.1E-37 | – | |
SUPERFAMILY | 321 | 481 | 161 | 4.55E-53 | ||
CDD | 326 | 440 | 115 | 5.53554E-39 | – | |
ProSiteProfiles | 327 | 441 | 115 | 33.196 | ||
SMART | 331 | 463 | 133 | 2.4E-4 | ||
Pfam | 343 | 457 | 115 | 4.0E-25 | ||
Pfam | 467 | 513 | 47 | 8.8E-15 | ||
CDD | 485 | 935 | 451 | 0.0 | – | |
Pfam | 524 | 601 | 78 | 4.7E-13 | ||
Gene3D | 532 | 682 | 151 | 2.2E-58 | – | |
SUPERFAMILY | 607 | 937 | 331 | 2.0E-86 | ||
ProSiteProfiles | 615 | 936 | 322 | 57.181 | ||
SMART | 615 | 936 | 322 | 5.8E-125 | ||
Pfam | 616 | 935 | 320 | 1.3E-115 | ||
Gene3D | 685 | 982 | 298 | 2.6E-117 | ||
MobiDBLite | 940 | 960 | 21 | - | – | |
MobiDBLite | 942 | 958 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0309200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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