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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0005500 |
| Transcript ID | LotjaGi6g1v0005500.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphate transporter; TAIR: AT3G54700.1 phosphate transporter 1;7; Swiss-Prot: sp|Q494P0|PHT17_ARATH Probable inorganic phosphate transporter 1-7; TrEMBL-Plants: tr|Q9AVR0|Q9AVR0_SESRO Phosphate transporter; Found in the gene: LotjaGi6g1v0005500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:1158988..1160611) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGGACAACTGGGGTTGCTCAATACACTTGATTTGGCCAAGACACAATGGTATCACTTCACTGCAATTGTGATAGC TGGAATGGGTTTCTTCACTGATGCCTATGATCTGTTTTGCATTTCCCTTGTCACCAAGTTGCTGGGGCGGATATATTACA CAGAACCAAATGCACCAAAGCCCGGAACTCTTCCTCCTAATGTCCAAGCTGCTGTCACTGGTGTTGCATTGTGTGGAACA TTAGCAGGCCAACTGTTCTTTGGTTGGCTTGGTGACAAGATGGGGAGAAAAAAAGTCTATGGTTTAACTCTTGTTCTCAT GGTAGTGTGTTCCATTGCCTCGGGTCTCTCTTTTGGATCAAGTGCAAAGAGTGTCATGGCATCACTATGTTTCTTCAGGT TCTGGCTTGGATTTGGGATTGGTGGTGACTACCCTCTTTCTGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGA GGCGCATTCATAGCTGCAGTGTTTGCCATGCAAGGATTTGGAATCCTGGCTGGTGGGATAGTTGCCTTGATTGTATCAAC TATATATGACCACAAATACAAGATTCCTACATATCAAGAAAATCCAGAAGCATCCATAGTACTGCCTGAATTTGATTATG TTTGGCGTATTATTTTAATGTTTGGTGCAGCCCCAGCTGCACTCACTTACTACTGGCGTCTGAAAATGCCGGAAACAGCT CGCTACACAGCCCTTGTTGCCAAGAATGCAAAACAAGCTGCTTCAGACATGTCTAAGGTGTTGAATGTCGAACTTGAAGT TGAGCAAGAAAAGTTGCAGAAAATTACAGAAGCAGATAACAATAAGTTTGGTTTATTCAGCAAGGAATTTGCCAAGCGCC ATGGGCTGCATTTGCTGGGAACTAGTTCCACTTGGTTCTTGTTGGACATAGCATTCTACAGCCAGAACCTTTTCCAGAAA GACATATTCAGTGCAATTGGATGGATCCCTCCAGCTAAAGAAATGAATGCCATCCATGAAGTTTATAAGATTGCAAGAGC ACAGACACTCATAGCACTTTGCAGCACTGTGCCAGGTTACTGGTTCACAGTAGCACTTATAGATTACATGGGTCGTTTTG CTATCCAACTGATGGGATTCTTCTTCATGACCGTCTTCATGTTTGCTCTGGCTATACCTTATGATCACTGGACCGAGAAA GACAACAGAATTGGGTTTGTTGCGATGTACTCACTCACCTTCTTCTTTGCCAACTTTGGCCCAAATGCCACCACATTTGT TGTGCCAGCAGAGATCTTCCCAGCAAGGCTAAGGTCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGAGCAA TTGTTGGTGCATTTGGCTTCTTATATGCTGCACAAAGTAAGGACCCCTCCAAGACTGATGCAGGGTACCCAACTGGTATT GGGATTAAGAACTCCCTCATTATGCTTGGTGTGATCAACTTCGCTGGGATGTTATTCACCTTATTGGTTCCAGAATCAAA GGGAAAATCACTAGAGGAATTGACTGGGGAGAATGAAGATGGTGCTGAGGGGATTGAGGGAGTAGGTTCTGCAAGGACAG TTCCAGTTTGATTGAAGTCTGTGA
CDS sequence (LotjaGi6g1v0005500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGGACAACTGGGGTTGCTCAATACACTTGATTTGGCCAAGACACAATGGTATCACTTCACTGCAATTGTGATAGC TGGAATGGGTTTCTTCACTGATGCCTATGATCTGTTTTGCATTTCCCTTGTCACCAAGTTGCTGGGGCGGATATATTACA CAGAACCAAATGCACCAAAGCCCGGAACTCTTCCTCCTAATGTCCAAGCTGCTGTCACTGGTGTTGCATTGTGTGGAACA TTAGCAGGCCAACTGTTCTTTGGTTGGCTTGGTGACAAGATGGGGAGAAAAAAAGTCTATGGTTTAACTCTTGTTCTCAT GGTAGTGTGTTCCATTGCCTCGGGTCTCTCTTTTGGATCAAGTGCAAAGAGTGTCATGGCATCACTATGTTTCTTCAGGT TCTGGCTTGGATTTGGGATTGGTGGTGACTACCCTCTTTCTGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGA GGCGCATTCATAGCTGCAGTGTTTGCCATGCAAGGATTTGGAATCCTGGCTGGTGGGATAGTTGCCTTGATTGTATCAAC TATATATGACCACAAATACAAGATTCCTACATATCAAGAAAATCCAGAAGCATCCATAGTACTGCCTGAATTTGATTATG TTTGGCGTATTATTTTAATGTTTGGTGCAGCCCCAGCTGCACTCACTTACTACTGGCGTCTGAAAATGCCGGAAACAGCT CGCTACACAGCCCTTGTTGCCAAGAATGCAAAACAAGCTGCTTCAGACATGTCTAAGGTGTTGAATGTCGAACTTGAAGT TGAGCAAGAAAAGTTGCAGAAAATTACAGAAGCAGATAACAATAAGTTTGGTTTATTCAGCAAGGAATTTGCCAAGCGCC ATGGGCTGCATTTGCTGGGAACTAGTTCCACTTGGTTCTTGTTGGACATAGCATTCTACAGCCAGAACCTTTTCCAGAAA GACATATTCAGTGCAATTGGATGGATCCCTCCAGCTAAAGAAATGAATGCCATCCATGAAGTTTATAAGATTGCAAGAGC ACAGACACTCATAGCACTTTGCAGCACTGTGCCAGGTTACTGGTTCACAGTAGCACTTATAGATTACATGGGTCGTTTTG CTATCCAACTGATGGGATTCTTCTTCATGACCGTCTTCATGTTTGCTCTGGCTATACCTTATGATCACTGGACCGAGAAA GACAACAGAATTGGGTTTGTTGCGATGTACTCACTCACCTTCTTCTTTGCCAACTTTGGCCCAAATGCCACCACATTTGT TGTGCCAGCAGAGATCTTCCCAGCAAGGCTAAGGTCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGAGCAA TTGTTGGTGCATTTGGCTTCTTATATGCTGGGATTAAGAACTCCCTCATTATGCTTGGTGTGATCAACTTCGCTGGGATG TTATTCACCTTATTGGTTCCAGAATCAAAGGGAAAATCACTAGAGGAATTGACTGGGGAGAATGAAGATGGTGCTGAGGG GATTGAGGGAGTAGGTTCTGCAAGGACAGTTCCAGTTTGA
Protein sequence (LotjaGi6g1v0005500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGQLGLLNTLDLAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTEPNAPKPGTLPPNVQAAVTGVALCGT LAGQLFFGWLGDKMGRKKVYGLTLVLMVVCSIASGLSFGSSAKSVMASLCFFRFWLGFGIGGDYPLSATIMSEYANKKTR GAFIAAVFAMQGFGILAGGIVALIVSTIYDHKYKIPTYQENPEASIVLPEFDYVWRIILMFGAAPAALTYYWRLKMPETA RYTALVAKNAKQAASDMSKVLNVELEVEQEKLQKITEADNNKFGLFSKEFAKRHGLHLLGTSSTWFLLDIAFYSQNLFQK DIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVALIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTEK DNRIGFVAMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAGIKNSLIMLGVINFAGM LFTLLVPESKGKSLEELTGENEDGAEGIEGVGSARTVPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 5 | 508 | 504 | 3.8E-293 | – | |
| PANTHER | 5 | 508 | 504 | 3.8E-293 | – | |
| TIGRFAM | 11 | 500 | 490 | 1.1E-224 | ||
| SUPERFAMILY | 11 | 497 | 487 | 2.35E-58 | ||
| Phobius | 21 | 48 | 28 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| ProSiteProfiles | 23 | 491 | 469 | 29.477 | ||
| Pfam | 24 | 497 | 474 | 2.5E-47 | ||
| CDD | 24 | 490 | 467 | 0.0 | – | |
| Phobius | 49 | 67 | 19 | - | – | |
| Phobius | 68 | 87 | 20 | - | – | |
| TMHMM | 68 | 90 | 23 | - | – | |
| Phobius | 88 | 98 | 11 | - | – | |
| Phobius | 99 | 118 | 20 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| Phobius | 119 | 123 | 5 | - | – | |
| Phobius | 124 | 141 | 18 | - | – | |
| TMHMM | 131 | 150 | 20 | - | – | |
| Phobius | 142 | 161 | 20 | - | – | |
| Phobius | 162 | 189 | 28 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 190 | 212 | 23 | - | – | |
| TMHMM | 213 | 232 | 20 | - | – | |
| Phobius | 213 | 232 | 20 | - | – | |
| Phobius | 233 | 348 | 116 | - | – | |
| Phobius | 349 | 367 | 19 | - | – | |
| TMHMM | 350 | 367 | 18 | - | – | |
| Phobius | 368 | 372 | 5 | - | – | |
| TMHMM | 372 | 394 | 23 | - | – | |
| Phobius | 373 | 392 | 20 | - | – | |
| Phobius | 393 | 403 | 11 | - | – | |
| Phobius | 404 | 423 | 20 | - | – | |
| TMHMM | 406 | 428 | 23 | - | – | |
| Phobius | 424 | 442 | 19 | - | – | |
| TMHMM | 443 | 462 | 20 | - | – | |
| Phobius | 443 | 462 | 20 | - | – | |
| Phobius | 463 | 468 | 6 | - | – | |
| Phobius | 469 | 487 | 19 | - | – | |
| TMHMM | 469 | 486 | 18 | - | – | |
| Phobius | 488 | 519 | 32 | - | – | |
| MobiDBLite | 496 | 519 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Inorganic phosphate transmembrane transporter activity | Enables the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Phosphate ion transport | The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0005500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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