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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0005800 |
| Transcript ID | LotjaGi6g1v0005800.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; TAIR: AT3G58130.1 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; Swiss-Prot: sp|Q9HDW9|GPI12_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; TrEMBL-Plants: tr|I3SVY7|I3SVY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0005800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:1204037..1212504) extracted from Lotus japonicus Gifu genome v1.2.
CACGTCCTTCTCCTTCAGTATCTCTTCCTCATTTCCTTTACCAACCTCATTTCTCCGTCGTCTAGCTCTTGCCTGGTTTT TTCTGTCCCACCATAGTCTCCTTCTCCTTCCTAGATCTGATGCCAGCCTTCCCTTCCCTTTCTTTTGGAGCACCAGATCT AGTGCTTCCCTCCCCCTTTTGTTGCTGGGTGGTCGTTTTAGGCACGACAGAAGGCTGCTCTACGGCGTTGAGCTGTGTAG CCGAAGTGTTCTTGTTTGGTGGAGTCAGTGTTGCTTCTCGCCTTCTAAGTTGCGGTTGAGGTGTTCCCTTTTGGTTGAGC TGTGTTGCTTCTCATTTCTTGAGTTGCGGCTGTCGAGTTCCTGTTTGATTGAGCCTATGCTACTTCTCATTTTTGTGGTG TAACCTCTCCTTTTTGCTATTTGCTGGTTTTATTATTCGGGGTTGCTTTGTGGGGTTGATCTTCGGTTGTCTCAATCATC GTTGCTTGTTGCTTCCGTAGAAGTGAAGACATTGGTGTTGGAGGTGCTTCGAGTCTCTATTTTTGGTGGCTTTGTTGCGG CTTGATAGGATTCCTTCCTCATTGTACTTGTTGCTGCCTTTAGTTGCCGAATGGAGGTCTTTCCCTGTCGTGGTTGGCGG TTCCTCTTTTGGTTTTTGCTTTTAGGTGTTGTTACTCTCACTTGAAGATTGTTTATTGCTGGTGGGTTTTGTTTGGTATT TTTGGGGTTTTTTCAGGGTTTTTCGATTGTTTTAGCGTTTTATCTTTTGTAGTTGAGATTATTGTTCAATCTACTCTGTA GAGTGTTGCGACTCGTTGGACTTTGTACTTTATAATCATTTTCAAGATTGTGAAACTCTCTCTTCTCTTTTTTTTTGTTT TTTTTTGTTTTCAATGATACCAAACAATAACCTAGAAAATCTATTATATTTCTCACATATTTCTATCATCTCTATCTCTC TTTTCTATTTCTCTTGTAAACCAAACACAGTGTTTTGTCTCACATTTTCCACTTCCTTGAATGACAAAACTTAAACAGGT ACAATAATCGTACGGCTTGGGTAGATTTGGTTGGCCGTAACTTCTCCGTGGATCCCCGGACGCCGCCGCCGCCGCACATC CATCACTTCCGCAAGCTGGCCAAGCTCCCTCCAAGGTAACTCCAGATTCAAGTTTTCTCCTTTTTCTTCTCAATTCATTT ATTCTTTTTTTTGAAATTAATTCATTTATTCTTGAATTTGTACAAAATGTGAATTTTTTCCGACCTTTCATTTATTTTGA AATTTCTAACTATTAAATTCTAATTTTTCTTATTCTCCTCGAAATTAACACTAATTGTATGACCATTTCTGTCTGTAGCC AGTTGAATGAGTGTGTTGTTGTTGTTGTTGTTTGATTTGTTATTTGTGGTGTTAACTCAAACATCATAAAACCAAATAGG AAGTGAAAGAAAGAGATGAACTGAGTATTTTAGGATTTGATCATGTTCTGGTGATTGGAGTTTCTTGCTCTGTTAGCTTA GGTTTTGAAGACTGTATTTATTCATGTATATTGTCTTCATTTATCTTTAAACTAATTTGGGCCTCACTTTTCAGATATAA AGGACAAAATTACACTTAAGTAAAAAACTCTCATCTAACTTGACACTTAATTTGGGTCTTAAGTTCTCTTGGTGCTTTGT TGCTTCACCCATTCGGCAAGTCTCCCTGCTTTCAGGCTCCCCCATGTTCAAATAAGACTGTTAAACTATATTAATGTAAT AGTTCAACTAGCGACTCACTAGTTTGATAAATGAATTAACCCATTGACCCAGTTGATGACTAATGTGAGTTTCATAACAT TGATGCTTCTTTTACTTTTATATGCTCATAGACCCTTTCACTATCACACGTGTTCACCACTCTCTTCTTCCTGATTCCTG TCACACTTGCAAATTTCTCTATTTTCTTGCTAAGAAATCTGATGAAATTATTATATATGTTGAACAATCTTCATTAATTG GTGCATTGTTCAGGTGCAATCTCAATGGCCTTCATTCTGATAATTACTCCGCTCATTTTATTGTGGATCATTTCCCTATG CAAAATTCTCCTTCTCTCACGGATCCCTTTCAATAAACATTTTACACAAAATGGTAGCCTACTTTCTTCTTCTCTTTTTA CTATCAGGACTTGAATTCTATTTATGTGTCTAATTTTATTTGTCTGAGCTTTCTTCCTTTTCTCTTTTTCACTCAATTTT AGTTTTGATCTGTTGTTATCAGGTAGAGCTCTTCGGAAGAGAAATGTCTTGTTGGTTATTGCTCACCCCGATGATGAATC CATGTAAGTTTGAAACCTCAAATTTATTATTTTTAGATGTTAATTTGTATATGACATTAAGAAGTTAATAACTTAATACC CTTAGATACCTCTCTAAATTGAGATTTCTAATACATTTATGCTACTTCACTTGAGACAAGGCAATGAAGGAGTGTTTCTC TTTCATGTGAATCTGCTGACATCGCCCTAGTTCGTTTTGCCTACAGCATTTTAGGGAGAGTAGTGGGTAGGTGAGATGAA CGTGAAGAAAATTGTAACTATGGACTAAGAGAGTTTCTCACGAGGAGCTCTGCTATTGTTACCTTGAATACAATAATATT TTCTGCATGCTACACTGACCTATCAAAGACTAAGATTGTGTTTGACAGACCCCCAGTTTTTCATTTTTTTCAGATTCCAA AGACAAAACAACGGAATACCATAAATTTCAATAAAAAAACGTCAAAGGAAGGATATGCTCCTATTTCGTTCAATGTAATG TGATTTCAAAGCAAACACACACCAAGTCTCTAATCAAAATTGTACAGAAGTGCATTTTATGTCAGACATTGTCAGGGTTC TAAATATTAGGCAAAATAATAGTGGCTTGGATCACACGGGCTTGATGTTTCTGGGCTTGGTGCGGCGCCTTATGGTGCTG TTCCTGTCGCATCACTTGGGTTTGGTCCTGTTTGACTCTATTAGTTAGTGTTTGGCTGTGTCTGTTTTTATTATCTGGAT TTGTCCTGTTTGGGCTAGGCTTATTTTATTAGTAGGGTTAGACTCATATAAATAAGAGTGTTCTCATTAGGTTAGGAATA TGTTTTTTATTAGTATTGGATTTTGCAAAGGGTTTCACCCTTGGATGTTTTCCTTCTTGTTAATCCATAAGGATTGTTTT TGGTATCTTCTTGCTTCTCTCTTATTTCTCTCTTATCTATATTTCTTTATCTTCTTTGTTGGGTTATACATCATAACTTT AAACACATAAGCAACAATTTCTATGTAAATGAATCTAACATTGCACCAATATAACTTTGTTAACTTCAGCGAATTGCATA TTTTATGGGGTGTTGGAGTTGGAGTGTAGTGAAGGCCTTTGAAGTTTGACTATTTCTTCAAATTTCTGCATTATGATTTC ACACTGTCTTCACTTTTTCCATTTCTGCAGGTTCTTCACCCCAACGATAAATTTTCTGACTTCAAGAGGGCATAATGTTC AAATACTTTGCTTATCAATTGGTATTAGCTTTGGATATTCTGTTTATCTTGTAATTTATAGCACTTATGGATATGTTTGT CTTTATGTTGATTCTTTTGTGCTTAATTTATTCACTTTATAGTTTACACTCATTTGTAATTAATTTTAAAATAACTGTAA TTTTTCTTTCTCCCTATTCTGTGGTTGAATCTTCTTCAAATTTCATCTTTCTAAATTAAGCTAGTGTAGTTTTGAAAAAG AATATAATTTTGATCCATGTCTAGCATGTAGAGTTCTATACTATCAATGAAACATTTTTTGGGACTTCATATACATTCAC ACCTTGGCAGTGATATTTATTTAAAATATCATATGCAGAAAGAAGTCCAGTTTTATGGATTAGATGATAATAGACATATA TGGTATAATCAAACTAATAAAGTATTCCAGCATTATGAATCTGATTTCGTCATGAGCTACACAACTCAGATTAATTGAAT ATTTTCACTTTTTGCATGATATGACAATTTCCTTTTTCTTTTGAGGCTTAATTGCAACTTTGGTTCCCGACGTTTACCAA TGCCACGATTTTGGTCCCCCACCTAATTTAATTACATGGATGGTCCCCGACGTTGTAGGCCGTGTGCAACGTTAGTCCTA CTGTTTATTTCTTAATGAAGGAGGCTTACGTGGACGTCCAATTGGAGAGAGAAATGAGGTATGAGGAGAGAGGGAAGCAC GTGAGTATCACGTGACCCTTATCTGAACCCATTATACTCAAACCCCTGACCTCCCTGGAACGAAGAAGGTAACGCGATTT AGATCCCTAGGGTTTCAGATTTGGGTATAATGGGTTCATATAAGGTTCACGTGAGTTCACGTGATACTCACGTGCTCCCC TCTCTCCTCAGATCTCCTTTTTCTCTCCAACTAACTAGACGTCCACGTAAGCCTCCTCCATTAAGAAATAAACGGTAGGA TTAACGTTGCACGCAACCTACAACGTCGGGGACCATCCATGTAATTAAATTAGGTGAGGGACCAAAATCGTGGCATTGGT AAACGTCGAGGACCAAAGTTGTAATTAAGCCTTCTTTTGATTTCCTTTTCTATAATAGTTCTATTCAATGGCCTTTAATT AATGAAAATTTTAATTTTGGATATGAAAGGTTTATGGCTATCTTATAATGTTAGACTTGGGATTTCTGGATGTCACAAAA CCAAAGCTTCTCAGCTTAGGCTCTAAAAAGACTTGAAGTTTATGTTTCAATCTGTTAGATATTTTTTAATTGTTATTATT TTTCTGTAGGTGATGCAGATGGCAAAGGAAACATCAGAAAACAAGAGCTTTTTCAGGCTTGTGTAGCCCTCAAGGTGATT TACAAAATGGTTTAAATTGATGTGTTTACAGACATAATGTAGAGCTTCTCATATTAAACATGACCCCAATATTAAAACAT TTATTTTTCCTTATATCATTTAGTGTTCACAGCCTCATAGTCATAGCTATCCTTTCTTGACACAAATTTCTTGGGATTTG GGAAATATAGGGACCCTTTCCTTGATAATGTTCGTTACATAGGTTAAAGATGACAGTCTTACTTTAACAATTTAATAACT GTGTTGTTTGTATAACATGGGTAATTTTGTACTCAGATTACGATGCAACAAGTGAAGATTGTCAATCATCCAGAACTGCA GGTTTTTATCCAATAGGTCTCTGGAATATAAAACTCAGTATCACTTCAAATCTTATTGTTAGTGCCTTATATTGTCGTTG CTTAACCTGTTGTGTACGTAGGATGGCTTTGGTAAAGTTTGGAATCATAGCTTATTGGCAAAGTTCATTGAGGATGAAAT AACTAGTCACTGCATTGATATGGTAAGATCATGCTTCTGTACTACTATTGTCATTTTAGGGATTGTAAAAGTTGTTTGAG TCATGAAGCTTCCATTTGTGCTGCCATAAGCATCTTTTGGAAGACTGGTACTTTGTTCAATACTTATGACCTCCTCACTT ACCCTGATTTCCCCAGATGATTACTTTTGACAACTATGGTGTCTCAGGTCATTGTAATCATCGTGACGTGCACTATGGAG TATGGTAAGTTGAATTATTATTAATACTACTACTGATCAATATTGAAGAACTTTAACTGGAATATTGTTGAGATTAGTAC TTATACTGTTTGAGATTTCTTTCACATTGCCCATGACCCATCCATTGCCCCCACCCTTTTGCACAGGCCAGCTGTGTGGT GTTATTTTATGCTTGTTAGGAGTTGATGGTTAAGTTACTTAAAACACTTAATACTTAACTAACCTGGAACAGCTTTTCTA ATTCCTATTGAGTTCTTTTTTAAACATACTGAAGTTTTGTTTAAAAGCTCCTGTGCGTTCTTATATCGGTCTTGGTAAAA TATGATATTGGTATTTGACTAAACATGCTTCTGATGGTAATTTGTTAATTTTCTGAGCAATCTTGCTGTTTATTGTGCCT TGCTGATTGTTAGAATTATCCTTGTGGATTTCTTTCACAGTTCTTTCAGTCCTCATGTTTGTGTGGTCTCTATCATAGTA TCCCAGAAAATGAAACATATGATTTACATGTTTAGATTTTACTCATCAGACAGGCTAATCACACATCACTCTCTCTCATG CTTGTGCTCTGACACTAAACTTTTTCCGTGTTGTAAGCAGCAAGCTACTGCATGATGCCTTACGAAGAGATGTTGAAGTT TGGGAGCTTGTATGTTTTTGCTTTCCTAATTTTATTCTGTTGTCTTATTTGGCCAATTACTTTATTAGAACTTGTTCAAT TGACTTATTCTCTAGTATTTCTTCCTTATTCTCAGATTAGCACCAACATATTACGCAAATATAGTGGTCCTGTTGATATT TGGTTGTCCATGTTTTTGGCCATGCTGCAATCAAATGGAACAATGCAGTGCTTGGTAAATGAGCAATATTGTAGGAGCCT TAAAGCTATGGCCCAACACTCCAGCCAGTGGGTGTGGTGTGCTTGCTTCATCTTATTTTTATTTTAAAGCAGTGGACTGA ATATATTACACTTGATATCTGTGTGATAGCAGTGTTGTTGATTGCGGATTACGAAAAATATCGGAAAGCCAAAAATCCGC TATGCTAAGCCCTCAAAGCGGAAAAAATAGCGGATAGCGACAAGCCCTTAGAGCGCTATACTATTGCGCTATAGCGCCGC TATATCCGCTATTTGACAACACTGCGTGATAGATATTATTATTTATATACTTCAAATGAAGTTGCCCCAAGAGGCCTTGC ACTATAGAATACCTTTTTGGCTTTTTCCCCACCTAAAAATTAATTTCATTTCTGCAGGTTTCGCAAGCTATTTGTTGTGT TATCCAGTTATACCTATATGAACACTCTTAGAAAGATCAAGTGAAGTTACAGTGCTGAAAAGTTGTGGTGAGTCTGAGAT TGTGTTTCATTTTCTGCTATCCTGTTTGGCATTTACATGACCGTAAATTGAACTTCAGTCAAGCTATTCATTAGGTGGAA CTGTGGTTCAAGCAACCTTTCATTTTCTCTTGACATGATTGAATGGAATCACTGCTGATCTTCTTCAAATTATGCTAAAC GCATATGTTCATTAACAGTGCTCTAAGTTCGTTGGTTATGGCTTATGTAGTTTTCAATTCTTTGTACTTGTGAAGTAGCA CAGTAACTTTTTCCTATTGATATGACTACTGTGGTTGATTGTTTTTCGTTTGCATTACTGTGGTGAGACGTTTTTTTTAA TATTAAATTGGTTTTAAAAGCCTACTTATTGGGCTTAAGCCCAATTAGTTGGTTAACCCATAGCTTATGATGGATGAAAA CGAGGGTTAGTTCTAATATATATATACATGACTAGATCCATTTCTTCCCTTGTACTTTGGCTGCGCATTCTTCCCACTAA GAGCTCAATAGGGGAGGGGAAGAGGGGGGGAGGGGGAGGAGAAGGAGGGGTTCTCGCTTGTGCATGACATCTCATTGCTG TTAGATTGTTGCAATAATTGTCATTGTGTCTTCAAGAGGTATGCAATTTTTATTGGTGTTCTAAATTCTATAGTATAGAT CTCATATCGGAAATTCTCCATCGCCTAAATTTTGAGAATTTAACTCATCGAATCAGAAATTCTCCATCGCTCTTGATGGT TATGGCGATATTTGATTGAGTTGAACTTTTCGTATTGTTTTTCAATTAACCTTCAAATTGAGAATTTAATTGAGCGCTTG GGCCCGGCATCTCATTGCAGGTAAATTGTTGCGATAATTGTCATTGTGTCTTCAAGAGGTACGCAATTTATATTGATTTC ATTGGTGTTCTAAATTCTATAGTATAGATCTCAGATCAGAAATTCTCCATCGCTTAAATTTTGAGAATTTAACTCATCGA ATCGGAAATTCTCCATCGCTCTTGTTGGTTATGGTGATATTTGATTGAGTTGAACTTTTCGTATTGTTTTTCAATTAACG TTCAAATTGAGAATTTAATTGAGCGCTTGTGCACAACATCGCATTGCAGGTAAATTGTTGCGATAATTGTCATTGTGTCT TCAAGAGGTACGCAATTTATATTGATTTCATTGGTGTTCTAAATTCTATAGTATAGATCTCGGATCGATCAGAAATTCTC CATCACTTAAATTTTGATAATTTAACTCATTGGATCGGAAATTCTCCATCGCTCTTGATGATTATGGTGATATTTTTTGT ATTGTTATTCAATTAATGTATTGTTGGTTTTATTCAATTTTGATATGGTTTCGTTTAGTTCAAATTGATTTTCCTTTGTG TTTTAAGTACAAAGTCTATGCCTTCTTTTAATATATAAATCAAAACTGAATTGAAATATTGAACTTCACCTTGTGAGTAC AACACTTTAGGTTTGTAATATTTTTTTTGTTTCTGGAAACCAAGACACTTGCTTTCTTGAAGAGTTGT
CDS sequence (LotjaGi6g1v0005800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTTCATTCTGATAATTACTCCGCTCATTTTATTGTGGATCATTTCCCTATGCAAAATTCTCCTTCTCTCACGGAT CCCTTTCAATAAACATTTTACACAAAATGGTAGAGCTCTTCGGAAGAGAAATGTCTTGTTGGTTATTGCTCACCCCGATG ATGAATCCATGTTCTTCACCCCAACGATAAATTTTCTGACTTCAAGAGGGCATAATGTTCAAATACTTTGCTTATCAATT GGTGATGCAGATGGCAAAGGAAACATCAGAAAACAAGAGCTTTTTCAGGCTTGTGTAGCCCTCAAGATTACGATGCAACA AGTGAAGATTGTCAATCATCCAGAACTGCAGGATGGCTTTGGTAAAGTTTGGAATCATAGCTTATTGGCAAAGTTCATTG AGGATGAAATAACTAGTCACTGCATTGATATGATGATTACTTTTGACAACTATGGTGTCTCAGGTCATTGTAATCATCGT GACGTGCACTATGGAGTATGCAAGCTACTGCATGATGCCTTACGAAGAGATGTTGAAGTTTGGGAGCTTATTAGCACCAA CATATTACGCAAATATAGTGGTCCTGTTGATATTTGGTTGTCCATGTTTTTGGCCATGCTGCAATCAAATGGAACAATGC AGTGCTTGGTAAATGAGCAATATTGTAGGAGCCTTAAAGCTATGGCCCAACACTCCAGCCAGTGGGTTTCGCAAGCTATT TGTTGTGTTATCCAGTTATACCTATATGAACACTCTTAG
Protein sequence (LotjaGi6g1v0005800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFILIITPLILLWIISLCKILLLSRIPFNKHFTQNGRALRKRNVLLVIAHPDDESMFFTPTINFLTSRGHNVQILCLSI GDADGKGNIRKQELFQACVALKITMQQVKIVNHPELQDGFGKVWNHSLLAKFIEDEITSHCIDMMITFDNYGVSGHCNHR DVHYGVCKLLHDALRRDVEVWELISTNILRKYSGPVDIWLSMFLAMLQSNGTMQCLVNEQYCRSLKAMAQHSSQWVSQAI CCVIQLYLYEHS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| PANTHER | 5 | 236 | 232 | 1.5E-93 | ||
| PANTHER | 5 | 236 | 232 | 1.5E-93 | ||
| Phobius | 16 | 19 | 4 | - | – | |
| Phobius | 20 | 252 | 233 | - | – | |
| Gene3D | 24 | 245 | 222 | 9.8E-19 | ||
| SUPERFAMILY | 42 | 236 | 195 | 8.37E-42 | ||
| Pfam | 46 | 166 | 121 | 2.3E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | N-acetylglucosaminylphosphatidylinositol deacetylase activity | Catalysis of the reaction: N-acetyl-D-glucosaminylphosphatidylinositol + H2O = D-glucosaminylphosphatidylinositol + acetate. This reaction is the second step of the biosynthesis of glycosylphosphatidylinositol (GPI), used to anchor various eukaryotic proteins to the cell-surface membrane. | ||
| Biological process | GPI anchor biosynthetic process | The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage. |
Expression pattern of LotjaGi6g1v0005800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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