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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0261900 |
| Transcript ID | LotjaGi6g1v0261900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Agenet domain-containing protein; TAIR: AT3G06520.1 agenet domain-containing protein; Swiss-Prot: sp|Q9FZD9|DUF3_ARATH DUF724 domain-containing protein 3; TrEMBL-Plants: tr|A0A151T678|A0A151T678_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0261900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57419407..57423931) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAATTAATTTTGTCCTATACTTTGAAAAGAAAAGAAAAAAGTTTTGTCCTTTTGTATTCTGGGCAAGGTTTTGGGTC TGTCATTTGTACACTTCAACCAATGTGGAGACAATACTTGGGGAAAAAGCAAACCAGTAATGAAGACACTCACAGAGGTT CACTCCCTTAGGTATTTGCATTGTTGAAACCTTTTAATCTTCACCATTCTCTTTCCACTCTCAACCAGAACCAGAATCAA AACCAAACCATGATGTCCATTTTCAACAAAGGTGAAGGAGTTGAGGTAATCAAGCAAAACGAAAATGACGAATACAGCTA CTTTCCGGCCACCGTGCTCCGGCCACCGTCGAAAAACAACAACATGGTGTTCGTGGAGTACCAGGCTCCCACAAAGTCAC GCAATAGAGAGTATGTGAATGTTGCTAGCGTGAGACCCAAGCTTCCATACGAGCTCAATCCATGGTTCAAGGTCGGTGAC TCCGTCGACGCTTTCCGGCCGAATGTCACTGCATTTTCTTGGTGCCCTGCCACCGTCTCCGACATCCTCGAAAACTCCAC CTACCGTGTCGACTTCCGTGGTCATTCCGCCGCCGTCGACCACTGTAGTCTCCGCCTTCACCGGGATTGGGTAAATGGGA ACTGGGTCCCACCTCTCCCTCAACCTCAACCGCAGGTTCGTTCGTTCCCACTGCAATTTCCACTTGTTTCTTTGCAGTCA AATGAGAAAGTTGAAAACTTTGTGGCAGTTGATAGAGAAATTCCTCCAATGGAGTAATTTCCTAAATGGGTTTTGTGGGT ATAGTGAGTTTCCATTTGGATGCAAGCCAAAAAGCACTTATTGAAACTTATTTAGTGCATTTTTTAGTAGTGAAGCTCCA ATAAGTGCTTTTTGGTTCGTATCCAAACAGGTTAGTACAAATGTAACCGGACACCATGAAGTATTTTATGGATTAAGATT AGATTACTGTTGCTTCATTATTCAAATGTAGTTATAAAGTGTGTTTGGGTTAGCTTTTAGAAACCAATTTAGAGTTCAAA ATCAATTATTTGCATGAAGCTTTCCTCATGTTTGGTTTGGTGTTTGCTAGCATTGGAATCAATTTCATTGATTGAGAAGC TACACTTGGTAACTTCTGTGGTGGATGTGATTTTAGACTGAATGTAAGTGATCAGTGTTTCCAAATATGCTAAAAGTTTA GCTTTTGAGTAGAACTGCATTTGCTTTTGAGTCCACTTGCACTCTTGATCTTAATGATTTTGTGGGTAAACTGGAAAGTA TAAATGTATTCACTTTGAGATTTCTTGGGTTAAGATTATGACTACTTGTGAGTAAGTATAAATGTATTCACTTTGAGATT TCTTGGGTTAAGATTATGACTACTTTAAGTTAAATCAAATATAGACATAGCCTTACTTTACTTTGAGTATGAAAACTTTA GAGTAGGTGAGTGCCTTTGTGGATGCCCATCCATACATGTAATGTGATACGCTACGTTGAAATGCATTCCCTTAGCAGAG TGATTGTATGTACAAAAATGGATTCTCATGTTTTTGTAGTGGGGAACATTTTTTCCATAGCTATAACAAGTTCAAATTGA AGATGCATTTTTTTCATTGGATGTTTGCTAATTTACCGAAAACTTGAGTTGCAGGAGCAGCCACCAGAAACGGTGACAAG GTCTGAAAAAATAAGGATCAAGATCAAATGCAGCAGAAGCCCACAAAAAGAATCAGAGTTTTTTAAAGGGAAAATAGTGG AAGTCAGCAGCGATGATGAAGGTTATAAGGGTGCTTGGTTCGTTGCTACTATTGTTGACATAATAGCAAAAGACAAGTTT CTAGTAGAATATAGGGACCTGGCAACCGAAGATGGCACCCAGCTCTTGAATGAAGTAATCCATGAGAGGTTTATTAGGCC CTGCCCCCCTGAAGTTCCACTTGCTGGTTCTTTTAAACAGTTCCAAGAGGTTGATGCATGGTACAATGATGGGTGGTGGG AAGGAGTGGTGTGTGAAGTACGTAATGGCAGAGAGTGCCTTGTTTCTTTTATGAACAATGATGTAATGGAATTTGAAAAT TCTAAACTAAGGCCTCATCAGGACTGGTTGGATGGAAAATGGGTCATGTCTTCCAAGGTAAAACACTTAGATGCCTCTCT TTTTTCGTTTTTATTAATCAAAGATTTTCTTCTGAAATTACAGTTGACAATTACGTCTTCCAAAATTGACTTAGGGGATA AGCAAACTTCAAACACCAAACTTGTTGAAATCATAGTTTTTACTCTCTTGGATTTGATGAGACTATCGTGTTTCCTGTTA CTTTATATTATAAATCAGTTTCTCTACAAGAGTTCTACCATATGTTGAAACTTGGGATGTCAATTAAATGATTCCAAGAT AAAGCGTTCTAAAAATTTCAGGCATTTTGTACCTTATAAAAACAAACCATCAACATCATGCATAACTTGTGAACTGCTCA TGGTCATCACGTAGTTTAAATTTGTCTGTTTATCTTCATATTATTATTGGATATAATGTTAAGCGAAAGCGCATCATTTT CTTACTAATTGCTCAATTCTGTTTATGGTGGAAACGTCTAAATCTACTTGACAATATGAGATTTTAAAATATCAGGAGTC AAGTGAGTTGGTGAAGAAGTTTGGAGATGTGAGGCCTGAGGCCAATAATCTCACTGGAAATAAATTAATTGTGAAACTTA AAAAGTCAAGTGACCCGGCAAAGAGGCCCAGGGATGTAATGGAAAGAACCCCGATCACCAGAAGCAAACATATGTTACAA TTTTGCAGAGGTGCAAAGGTAGAAGTTAGAAGCGATGAAGAAGGATACCAAGGTTCCTGGTATACTGCCATTATTGTTGA CCCTTTGCAGAGCAGCAAGTACTTGGTGGAATATTCAACCCTTAAAACAGATGACTTGACTGAACAACTGAAAGAAGTAG CAGAAGCTTTTAATATCAGGCCATGTCCACCAGATACTAGTGGTGCTGATTGCTTTTTGCTGCATGAATGGGTTGATGCT TGGTATAATGATGGATGGTGGGTAGGTCAGGTATCCCGTGTTCTTGGAGGCTTCAAGTATATGGTTTACTTCTGGACTTC AAAGGAGGAGCTGGAATTCGAATACAGTCTTCTAAGGCCTCATCAGGACTGGATTGATGGAAAATGGGTGCTTGCTTCTT TGGTATGACTTAAACAACACTTTATTTGATTTGTTAATTTGCCAAAATATTTTGATATGATATGCTTGGTAAAATTCATT GATCTTCATCACTTTTATATTTATAATTTATATAGTGAGTAACCTCTCCACATGATGGTATAGCCCATTTAAGCTAATTA CTGATTACTGTTGTGACCTCTTACTAATTGTTTCACTCATTTAAATGTTACTTTTTGTCGTTGGATCTTTTAGTATGTTG TGATATAGTGGTTCCTTGCAGCTGTACAACAATGTCTTCATTTAAGGCAACAAATAAATTCTTTCTTGCACTATCTGTTA ACTGTGAGGTAGTTTGCCTTCTTTTCTTTTTGGCTTTGTATTGGAGAGTTCTTTCCTTTGGCATTTCTCGGGGTGGATGC ACAGCTTATGGCTTTATTTTTCCAGTCTTTTGAGCAATTTTCTTTTAACATGAAACTTGAAAGACAAATGTAAAGTTTCC ATTTTCTACCTTATTAGTTCATTCATGTAATGAATAATTATTTAGTTACAGTTTGGAATGTTAAATGCATTTAGAAAATT TGTTGTGTTGACAAGTTATTATTGGACTAGTTCTGAGACAAAAATATGGTAGTGGTAGGGTAGCATGTTGAAATGTTGAT CCGCCAGTAATGTAATAAACTTGCTCCATTCATTTGATATATTTGAACTCTATAATCAGCTGTTGACTAATTTTATTTCT CTATTGAATGATTGCTCCATTCATTTGATATATTTATATACTGAATGATTGATTCCATTACTCTATTAATCTTTTTCTGG GAGTGTAAACTGATTACTCTGGTTCTTGTTCTCTATGGTTTCTTCTAGGATCCAAGACCTGTTCGTTAGTGAATTGCTAG AAGTTCTTTTTGCTACTTTGCTACCTTCACTGAAATGCTTTTTGCTGCCAGCCATCCTATCATTTAGCACTTTCTGGTGC TAATTGCAACTTCAACCTAGAGGTTCTTTTTGCTACTTTGCTACCTTCACTGAAATGCTTTTTGCTGCCAGCCATCCTAT CATTTAGCACTTTCTGGAGTTGAAATGTAATCTGCAAATATGTGTAATATGCTGATCTGTGTTTTGTCTACTCCTGGTGC TAATTGCAACTTCAACCTTTTTCTTTTGTCTGTAGTTATCCCACTGACATTACTTTATGTATATGTAATGTTAATATATC CCAAAATCAGGATTATTATGTCGAAGAACATATGAACTGAGTTTATGTTTTGATTACTTATAACCTATTGGGTTTACTTT TGTTGCTACTTAAACAAAGAGTGCATCAGAATGTGTTGTTTTCCT
CDS sequence (LotjaGi6g1v0261900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCCATTTTCAACAAAGGTGAAGGAGTTGAGGTAATCAAGCAAAACGAAAATGACGAATACAGCTACTTTCCGGC CACCGTGCTCCGGCCACCGTCGAAAAACAACAACATGGTGTTCGTGGAGTACCAGGCTCCCACAAAGTCACGCAATAGAG AGTATGTGAATGTTGCTAGCGTGAGACCCAAGCTTCCATACGAGCTCAATCCATGGTTCAAGGTCGGTGACTCCGTCGAC GCTTTCCGGCCGAATGTCACTGCATTTTCTTGGTGCCCTGCCACCGTCTCCGACATCCTCGAAAACTCCACCTACCGTGT CGACTTCCGTGGTCATTCCGCCGCCGTCGACCACTGTAGTCTCCGCCTTCACCGGGATTGGGTAAATGGGAACTGGGTCC CACCTCTCCCTCAACCTCAACCGCAGGAGCAGCCACCAGAAACGGTGACAAGGTCTGAAAAAATAAGGATCAAGATCAAA TGCAGCAGAAGCCCACAAAAAGAATCAGAGTTTTTTAAAGGGAAAATAGTGGAAGTCAGCAGCGATGATGAAGGTTATAA GGGTGCTTGGTTCGTTGCTACTATTGTTGACATAATAGCAAAAGACAAGTTTCTAGTAGAATATAGGGACCTGGCAACCG AAGATGGCACCCAGCTCTTGAATGAAGTAATCCATGAGAGGTTTATTAGGCCCTGCCCCCCTGAAGTTCCACTTGCTGGT TCTTTTAAACAGTTCCAAGAGGTTGATGCATGGTACAATGATGGGTGGTGGGAAGGAGTGGTGTGTGAAGTACGTAATGG CAGAGAGTGCCTTGTTTCTTTTATGAACAATGATGTAATGGAATTTGAAAATTCTAAACTAAGGCCTCATCAGGACTGGT TGGATGGAAAATGGGTCATGTCTTCCAAGGAGTCAAGTGAGTTGGTGAAGAAGTTTGGAGATGTGAGGCCTGAGGCCAAT AATCTCACTGGAAATAAATTAATTGTGAAACTTAAAAAGTCAAGTGACCCGGCAAAGAGGCCCAGGGATGTAATGGAAAG AACCCCGATCACCAGAAGCAAACATATGTTACAATTTTGCAGAGGTGCAAAGGTAGAAGTTAGAAGCGATGAAGAAGGAT ACCAAGGTTCCTGGTATACTGCCATTATTGTTGACCCTTTGCAGAGCAGCAAGTACTTGGTGGAATATTCAACCCTTAAA ACAGATGACTTGACTGAACAACTGAAAGAAGTAGCAGAAGCTTTTAATATCAGGCCATGTCCACCAGATACTAGTGGTGC TGATTGCTTTTTGCTGCATGAATGGGTTGATGCTTGGTATAATGATGGATGGTGGGTAGGTCAGGTATCCCGTGTTCTTG GAGGCTTCAAGTATATGGTTTACTTCTGGACTTCAAAGGAGGAGCTGGAATTCGAATACAGTCTTCTAAGGCCTCATCAG GACTGGATTGATGGAAAATGGGTGCTTGCTTCTTTGGATCCAAGACCTGTTCGTTAG
Protein sequence (LotjaGi6g1v0261900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSIFNKGEGVEVIKQNENDEYSYFPATVLRPPSKNNNMVFVEYQAPTKSRNREYVNVASVRPKLPYELNPWFKVGDSVD AFRPNVTAFSWCPATVSDILENSTYRVDFRGHSAAVDHCSLRLHRDWVNGNWVPPLPQPQPQEQPPETVTRSEKIRIKIK CSRSPQKESEFFKGKIVEVSSDDEGYKGAWFVATIVDIIAKDKFLVEYRDLATEDGTQLLNEVIHERFIRPCPPEVPLAG SFKQFQEVDAWYNDGWWEGVVCEVRNGRECLVSFMNNDVMEFENSKLRPHQDWLDGKWVMSSKESSELVKKFGDVRPEAN NLTGNKLIVKLKKSSDPAKRPRDVMERTPITRSKHMLQFCRGAKVEVRSDEEGYQGSWYTAIIVDPLQSSKYLVEYSTLK TDDLTEQLKEVAEAFNIRPCPPDTSGADCFLLHEWVDAWYNDGWWVGQVSRVLGGFKYMVYFWTSKEELEFEYSLLRPHQ DWIDGKWVLASLDPRPVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 3 | 69 | 67 | 19.0 | ||
| PANTHER | 5 | 133 | 129 | 6.3E-133 | – | |
| PANTHER | 5 | 133 | 129 | 6.3E-133 | – | |
| Pfam | 8 | 66 | 59 | 1.5E-5 | ||
| SMART | 71 | 129 | 59 | 7.5E-4 | ||
| PANTHER | 161 | 490 | 330 | 6.3E-133 | – | |
| PANTHER | 161 | 490 | 330 | 6.3E-133 | – | |
| SMART | 169 | 237 | 69 | 6.4E-14 | ||
| Pfam | 174 | 234 | 61 | 3.7E-19 | ||
| SMART | 240 | 295 | 56 | 1.2E-9 | ||
| SMART | 357 | 425 | 69 | 1.6E-17 | ||
| Pfam | 362 | 422 | 61 | 1.5E-18 | ||
| SMART | 428 | 484 | 57 | 4.0E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0261900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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