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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0263300 |
| Transcript ID | LotjaGi6g1v0263300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Boron transporter, putative; TAIR: AT3G62270.1 HCO3- transporter family; Swiss-Prot: sp|Q9M1P7|BOR2_ARATH Probable boron transporter 2; TrEMBL-Plants: tr|A0A151T694|A0A151T694_CAJCA Putative boron transporter 2; Found in the gene: LotjaGi6g1v0263300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57696616..57704994) extracted from Lotus japonicus Gifu genome v1.2.
CACACATACTCATTGATAAAGAGTTGTTTGTTTGTTTGTTCTCTTCTCTATATACAAGATCATTATATATGCATTGAACC ATATCATTAAACAACACCACAAACAAATAAAATGTGTTTCAGATTTAATGTAATGCTTCTGTCCAAGCCAATCCAGCTTG TCATCAACTGGCAAAACGCGGTTATCTTCATCATCTTATAATCATGTCTATGTGTTTGTGTCTTCAAATGCAGCAACACC AAAATCTCTCACACACTGCAATCTTCTCCATCTTCACTTCATTCCTTTTGTACCCTTTTGTGCTTTTGACTCACATTGTC GTCTACTTGCATTTCTGTGTACCCCCACTGTGAAAGTTCCTCCCTTTCTGCTTGCTTAATCCTCCAATCCTTTGTCATTT TGGTCATTCACTCCAACTGGGGTTTGAAGCTTGGTGACTCGGTCTGTTCCTTAAAAATTGGAACTTTGTTAGAGCCAAGA TTAACTGATTTAGTACAGTGCTGTTTCTTCAAATCTGTACTGTTTTTTTGGGTCATAAATCATGGAAGAGACATTTGTTC CATTTCGTGGAATAAAAAATGATCTTCAGCAGAGGTTGATGTATTACAAGCAAGACTGGATTGGTGGTCTCACTGCAGGT TTCAGGTACATCTTTTCTTATGCTGCAAAATCACTCACTTGTTTTCTTAAATCTGGGTAGTGGATTTTGATGTCATGACA TGTATTTTAATGAAGATATATAATTTTTTTCTTTTTATTCAGTTGGTAAGTTTTATTTTAACTTTTACATTTTTTTTTCT ATTGGAATGTTAACTTGGTACTTAAACTGCTGTTTTGTAGGATATTAGCCCCTACCACGTATATATTTTTTGCATCAGCA ATTCCAGTTATTTCATTTGGAGAACAATTGGAAAGAGATACAGGTAAATTACTCCTATTGACTAATATCCCATATGTTGT GTTTCTTGAGTTTTATTTATACACTAATATAGTGATTTGGTGCACCTTAAGTTTGATGTACTGTGTGTTCACCTTTTTTT CAGGTGGAATACTCACTGCAGTGCAAACATTAGCATCTACTGCTGTGTGTGGAATTATACACTCAATTATTGGAGGCCAG CCTTTGCTGATTCTTGGGGTGGCAGAACCAACCGTAATTATGTACACGTTCATGTTCAACTTCGCAAAAAATAGACCGGA TTTGGGTTCAAAGCTTTTTCTAGCATGGACTGCATGGTATAGCTTGTTCACTTTCAGATTTTAAGTGATTAGTGACTTAT GTTAGCTTTCATATTTCTTATTTTGTGTTGGTAGTTTTCCTAAACAGAGAAATTTATTTGCCTTGTGAATTCATTGTATG AGCAGGGTATGCATTTGGACTGCCATCTTGCTGTTCCTACTTGCTATCTTAGGAGCTTGCTCCATCATCAACAGGTTCAC ACGCATAGCAGGGGAATTGTTCGGCCTTCTTATCGCAATGCTCTTCATGCAAGAGGCTATTAGAGTAAGAGGCATATTTC TGTTTTCTCTGACAATAATATGGACTCATGAGTTTTGTTTTAGCACAAATGATTATGTGGCTCTAGCATGACAAAGTGGA AAATAAGATAATTTATGATATAATATTGGATGGAAATTAATTCAACTGAGACAGATGCTTTCTGATTGGGTTTAACAGGG ACTCATCCACGAGTTTCGCATACCTGAGAGATCAGACCTAACATTACCTGAGTTTGAATCTTCATGGAGATTTGGAAATG GAATGTTTGCTTTAATTCTGTCCTTTGGCCTTCTGCTTACAGCATTGAGAAGCCGAAAAGCAAGGTCTTGGCGATATGGA TCAGGTAAAACCCGTTAGACTTTGTAAAGGTTTACATTGAAACAAGCAAGAAAGCATAAAATTTTCCTTCCCTTATAGTA TTTGTGGATTGTTGACAAAAGAAGTATTTAACAGAAGTCGATAAGCTGATAAGTAATAACTTAATTGCACTTACGGTGGT CTTCAGAGTGATACATGTACAGCATTATGTACTTATATAGAATATGCAAAATGAAAAAACTAAAGATTTTCCTTTTACTC CAAAACAGCTGAAAATGTTCTTTTAACTCAGCTTTTGATGAAAAGTCCTTTCATTATGTTTCAGTTGTTCTTAGATTTAT TTTCGCCTTATTACAGGATGTCTGCGAGGCTTCATAGCAGACTATGGTGTCCCATTGATGGTTCTAATATGGACTGCTGT TTCTTATATACCTGCGGGGAGTACGCCAAACGGAATCCCTAGGCGCCTCTTCAGTCCAAATCCATGGTCTCCTGGTGCAT ATGAAAACTGGACTGTCATAAAGGCATGGCTACTCAACAAATCCAAATTATTTATTGTTAGGATATATGATGATCAAAAT TTCAGTGTTTGGATATATGGTGATTAAAGTTCTCTTTAAAATTTTATAATCTCAGTACTTCAATGGAAAGTTCTCATGTA ATTTTCAAAATCATTAACAGGACATGCTGAATGTGCCTGTTCTCTATATTATTGGAGCATTTATTCCAGCGACGATGATT GCTGTGCTATATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAAGCCACCTTC TTTCCATTATGATTTACTTCTTTTGGGATTCATGGTACATGATCCTCCTTGCTTTATGTTTAATTCCATTGGCTCTTTTC CTTTTGCCTAATGCTCTTTATTTTCCCTTTCCAATTTAAGACAGGGTATAGCGTTCTGATCTGCCCAAGAACTAAATATT TTGATTTTTGATATGTTGGGTTTATGACATTGACAGGTTATAATATGTGGTCTTATTGGAATTCCCCCATCAAATGGTGT TATTCCACAATCTCCAATGCATACCAAAAGTTTAGCTACATTGAAGCACCAGGTAGATTAATTAGTTTTCTAGTTCTATA GAGCTTCACTTTATCAAACTGATAAATGTTGCCAAAGCACTTCCGTTGCTACGAACTCTGATAGACTGGAATGTTAAAGT GGAAACAGAATACATAGTGACATGCATACTGAAACTACCATCTTTGTATTTTGGTGATTTGCAGTTACTTAGAAACAAGC TTGTTGCAAAAGCTAGAAGTTGTATGAGAAAGCAAGAAAACCTGGGACAAGTATATGGAAGTATGCAAGATGCTTATTGG CAGATGCAAAGCCCTCTAGCTCACCAGGAACCTTCCTCTCAGGTATGTAGGATTGTGAACTTCTTTACTCTCCCTTTTCC CTTTCACCTATATGCATGATTACTCTTCGAAACTGGACAAATCATAGTTGATAAGAATTTTCTGACATTTAATTCCTCAG TTCTGCTTTGGGTTTGGAAGTTCTCTATTCTAGGACCTGCGCAAAAAAAACTTCCATTATGTCATTGTTTTAATGGTTTT AAAAACTGAACTTTATTCTGATATTGTCAGTATTATCATCCAACCTTGCCGAAACCTTGTTTTGACAGGGACTAAAAGAG TTGAAAGAGTCAACTATTCAATTGGCATCAAGCTTGGGGAGCATAGAGGCTCCAGTTGATGAGTCAATATTTGATATTGA GAAGGAAATCGACGACTTGTTGCCTGTCGAGGTTAAAGAACAGCGAGTGAGCAACTTGCTCCAATCTTTGATGGTAGGAG GATGTGTTGCAGCAATGCCTTTGCTAAAAAGGATTCCAACTTCTGTACTGTGGGGCTATTTTGCTTTCATGGCCATCGAA AACTTACCCGGCAACCAGTTCTGGGAGCGGATTTTACTAGTTTTCACTGCTCCAAGTAGACGATACAAGTATGTCTTAAA CACCATTTCCTGTCTTTTATCTCTTAAAAATATTTAACAAGTTACATTCACTAACTTGCTGCCGGTTTTTTATTTCTGTT GCGAAATAATTAGAGTTCTGGAGGAGTGCCATGCAACTTACGTGGAAACTATACCTTTCAAGACAATAGCAGTATTTACA GTCTTCCAAACTGCTTACTTGCTTGTTTGTTTTGGTATCACGTGGGTTCCAATAGCTGGGGTTCTATTCCCATTGATGAT CATGCTTCTGGTTCCTGTAAGACAATACATTTTGCCCAAGTTCTTCAAAGGGGCACACCTTCAGGATTTAGATGCTGCAG AATATGAAGAAGTACCTGCTTTACCATTTGAACTAGCTACTGTAAGTTGTCAATACCAGAGCCATAATCACCTTTTTTTT TCGCTACACATTAGGGGTATTTTTTCTCTTCGCAGAAAGAAATGGTTGAATACATTCAAACTATTTATACCATTATGGCA TGGCATTGCATAAAACCTATATGATACTGATATCAACAGTAGCAAGTAGTGATTTAGATCTCTTTGGAAAATTATCTGTA CTGGGCTATTTCATTTTTCATGCTTTTGCCCCATAACTTCTTTGAGGTCAATCAGCTTCTTATGCTACTGTCTTCCATGT TTGTTCTATTTATGCAGGAAGGTAACTTGAGCAGGACAGCTTCATTTGCAGATGATGGAGAGATTCTAGATGGAATGATT ACTCGAAGCCGGGGTGAGTTTAGACGTGTTTGCAGTCTGAAGGTGGTGAGCTCCCCTGGAACTCCATCCAAAGAGTTGAC AGGTATTCAAAGTCCAAGGTTCTCAGATAAAGTATACAGCCCTAGGGTAAACCAACTCAGAGAAAATCATAGCCCTCGAG GTGTTGGGAGAGGACCATTTAGCCCTGGAGAAGCTAAGCCATCGAATTTGAGAAAGAGTGGATAAAGACTACACATTTTT TTGTTGATACTAATGCCTACAATTCAAGGATTGCCAGCAAAAGGTGGCATGCCCCTTGCTTATTTTAACATCTGATTCTT GAGAATGGCAATTGTAGCGATATAAATTATTTAGTGTAGGGAATTTGTAGCAAGAGTTCTGTCGCTTGTATACATATATT TTTTTAAATACCAAATTGTAGAGATGATTAAAGTCTATGATTTGTTTGTGAATGCAATTGTGGAGGCATCGAGTGGTGTT TACTAGTTGAGTTAAAGTGAAATCACTTTCATTTATAAAGAGTTGTTAACGTCCGTTGGCATTTCAGTTGAATCCAAGGT AAAAGCATTGTTTCTCCTCTATTATCGAAGGTGAAAACAAAGAGAGCCTTATAGTGGTTGTTTGTATTTCAGTTGGCAGC CCTTTCCATGGTCTCGGAATGATAAATATTAAATACCACTTTCCAATTGAATAGACTTTCAATTGAAAGCCAACTTAAAT ACAAACACAGCATATGAAGAACTAGCTTTTTTTTTGTGGATAAATATCACCACAATCTGTCATCCTTCAATTCAGATTGA AGAACTAAGTACAATCATTTATGTAAAAGAATAGTGGCACTGCCTGAAAAATAAGACTTTAGGAAACCTTGAATAACTAA CGAGCTAAGAGGTTCATTCTAACAAAAAGAACTAGACCACCATCAACCTAACATAAATAAGGTTAACCTAAAACTTGTGG ATCTTGCAAATATAATTTTTCCTAACATCATACCAAAGTTAATAATGTAAAGGATGCCCAGCCCATCGTTTTGAAGGGGA ATAGTAGAAGACGCCATTGCTCTTGACATCGTGAGAAACTCTCCACACACCTCCCAACAGCTTTCTAAGAAAATTTGAAA GGCGTGGAGAGTTTCTCACGGTGTCAAGAGCAACACTTTTATCCTCAGCACCAGCCCTGTAATTACAGTAGGTGAATGTT GTATGACTTTATAAACCACTTGTCCAAACCAGTTCCCCTCAGGTCCAGTAGCTTGACTTGGTTTGAATGTTAAAGGATTA CCCCTTTTTTTGTTAAAAGAAAAGTTTATTAGGATGTACCACTAGACTGTTGGTGCCAAAATGAATACTCCTTCTAACGA ATCTAAAATTCTAACCGAGGAAAACTTTTTTACTCACCTTCGGAACAATCCAACAATCACAAGCCCACAAGTAACAAATG ACAATCCCTTAGAAGTCATGAATTTAAGTGATATAATAATGCATGTGGAAATTAAGAACATAATTATGCTACAACTTCTT GGCTTATACTTGGACTTTGGCGTCGTTCATCGCATAATGTATGAAACACAAAATCTGGCAGAGTTCTGGAAATGATTATC TGCCAAACCATGAGTTAATAGTAGAAACTGGGAAGTAGTTTTGAGAGACTTGAGCATTCTTGATATGGAAGAGGACAGAG AAAAAGTCATCCTGCTATTTCCTACCATTTTTTTATTTCAACAGTTAACATAACCATCATAAAAACCTTGGAATGTCTTT TCTATATGGTTGATATGCCAAAACCAGCACTGATGGACAAGCTGAATCATTTGGGATAAAGCAAGCTAGGCTCTTTTAGG AGGACTCTTGCTAAATTTACGGCCGGACATCGTCTCTGACTCATACAGTATGTGATTGATAAGTCCCCTTGCAGCACTAC AAAACCAGAAAAAAGAAAAGAGAAGTATTGATTTGTGCTCAGAATAAGCAGCCTATGTATAAGTAATGAAATGTAGATTT CCCACACACATGACCACGGTTTTGTACACTGAGACATCAGAAATGTATTGTTGCATCAGTTAAAGAGGAAAGGGAACCAA AGCAGAAATGGGAACAGACTAGGAATCTAGAAACAAGCTCAATATAACTGCAAGATACTAGAGCAAAGCTTACTCGTCCT TGAACTTTTGAATCTTTTCAGGATCTGTCTCATGTATGTTTTTCTTAAACTGTTGTCTCACCATGTCAACAAGAAGCTCC GTGTTATAATTCTGCAGAGCAATGAAGTGTCACGCATCTTAATTTTATCACACACGTAGATTAGATATTCGGTTCAAGTA CAGTGCTCCAGTAAAAGGAGTGCATCAGTAGCTGTGGAAGGGCATAACTCAAATGAAAAAGCATACCATGATCATAGGTT AAGAGTGTAACAAGCATGAAAAAGGACAGTAGTTTAACTAACTATTTGGTTGGAAGTGAATGTAGGGAGGGGGAGGGATT TGAATACAAATCTCATGTCTGGTTTAGAAGTTTAGGGTTGAGAAGAGAGAAAGTGAGGGAACAAATTTCTGCCTTCTCCA ACTTTTGCCTCCCCTCCAATATAGGGAGGATTTGAAGGGGAGGGAAAATGACTTAAAATTTTGCAAACTAAACTGTCCCC CCTCTTTTTTTCTTATTAATTTTGACAACTGTTCTTACATGGGGTTGTCTAAATTACCCATGAGGGTGATTTTATCCCAC CCTAATGGACCAATAAGATTAATAATACAAAATAAAGAAAAAAGATATGAAATTCCTTACCCATTTATCTAAAATTCTAC AGGTCCACCTAGGAGATGGTAAAATCACCCTCATGTGTGATTCAGACAACCTTGTTCTTACATATGCTATCTCTAGCAAT CAATTGTTACATGCTTCACCTCTTTGAGCTTCTTCTCTTTCATATTGTGTAAACCTCAGTTATGAAGCTTTTTCATGTCA ATTCAACTCAATTTTATGCCCCCTCCCCTCCATTTCTCTTCAACCAACCCGAGTAAGCAAATTTCATGTTCCCTCTCCTC CCCTACATTAAAATCTATTCCTTTCTCTCTTCTAACCAAAAAGGTCTAAAAGTAAATGATGCTGTGTGCTCAGAGGATTT GAGTATGTTAAACACATGAACTAAATTTCAACATCAAAATGTGATAACATGGACATGCCTCAAGAACAAACCCCATTTAC AGATTTTTCACACATATTCTATCGAAATCATGACATACCCGTTGACCGATATATTTAGCTCTTCGCAGACATTCCCGGTA AAGCTGAAACCAAAACCCACATAACAGTAAAAAAGAGATCCCTTATTTTTCACAAAGTAATTGAAGAGGAAAAAGAAAAT AAACTATCTGATATCTGACCCTAATGGCATTGTTGGCGAGCTCAGGAGGCAGTGCAGTTTGAAGGGAAGGCATTTTCAGA ACTGAAGACCTTGTTTCCCTGAGAAACAAAATCCCAAGACATTTTATCGAACAGTTTGTAGGCAGAAAATCAATGACAAA ACATTTGATCTAATTCTAACGATAGAGCTACACGAGAAGAATAAGGAATTGGGATGATGGTTCGTTACCTAATAGTGATT GATTGATTGGTTATGAAGCGAAATCGAAATCAAGTTCAGAGTCTGCGGAGGTGAGACACCACCGTCCACCACCAAAGCTA AGATGACACTCTGTGTTTTGACGTTTTTTACTTTTTATACTAGAAGCAAATAAATTAGAGGAAATGTGAGTTATGAGCAA TTTTTAAAAAGTTAGTAATATTTTTTTTTGCTTTATCGGAATTTTTTTTTTGTTTCTTT
CDS sequence (LotjaGi6g1v0263300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGAATGTGCCTGTTCTCTATATTATTGGAGCATTTATTCCAGCGACGATGATTGCTGTGCTATATTATTTTGACCA TAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTTT TGGGATTCATGGTTATAATATGTGGTCTTATTGGAATTCCCCCATCAAATGGTGTTATTCCACAATCTCCAATGCATACC AAAAGTTTAGCTACATTGAAGCACCAGTTACTTAGAAACAAGCTTGTTGCAAAAGCTAGAAGTTGTATGAGAAAGCAAGA AAACCTGGGACAAGTATATGGAAGTATGCAAGATGCTTATTGGCAGATGCAAAGCCCTCTAGCTCACCAGGAACCTTCCT CTCAGGGACTAAAAGAGTTGAAAGAGTCAACTATTCAATTGGCATCAAGCTTGGGGAGCATAGAGGCTCCAGTTGATGAG TCAATATTTGATATTGAGAAGGAAATCGACGACTTGTTGCCTGTCGAGGTTAAAGAACAGCGAGTGAGCAACTTGCTCCA ATCTTTGATGGTAGGAGGATGTGTTGCAGCAATGCCTTTGCTAAAAAGGATTCCAACTTCTGTACTGTGGGGCTATTTTG CTTTCATGGCCATCGAAAACTTACCCGGCAACCAGTTCTGGGAGCGGATTTTACTAGTTTTCACTGCTCCAAGTAGACGA TACAAAGTTCTGGAGGAGTGCCATGCAACTTACGTGGAAACTATACCTTTCAAGACAATAGCAGTATTTACAGTCTTCCA AACTGCTTACTTGCTTGTTTGTTTTGGTATCACGTGGGTTCCAATAGCTGGGGTTCTATTCCCATTGATGATCATGCTTC TGGTTCCTGTAAGACAATACATTTTGCCCAAGTTCTTCAAAGGGGCACACCTTCAGGATTTAGATGCTGCAGAATATGAA GAAGTACCTGCTTTACCATTTGAACTAGCTACTGAAGGTAACTTGAGCAGGACAGCTTCATTTGCAGATGATGGAGAGAT TCTAGATGGAATGATTACTCGAAGCCGGGGTGAGTTTAGACGTGTTTGCAGTCTGAAGGTGGTGAGCTCCCCTGGAACTC CATCCAAAGAGTTGACAGGTATTCAAAGTCCAAGGTTCTCAGATAAAGTATACAGCCCTAGGGTAAACCAACTCAGAGAA AATCATAGCCCTCGAGGTGTTGGGAGAGGACCATTTAGCCCTGGAGAAGCTAAGCCATCGAATTTGAGAAAGAGTGGATA A
Protein sequence (LotjaGi6g1v0263300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLNVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVIICGLIGIPPSNGVIPQSPMHT KSLATLKHQLLRNKLVAKARSCMRKQENLGQVYGSMQDAYWQMQSPLAHQEPSSQGLKELKESTIQLASSLGSIEAPVDE SIFDIEKEIDDLLPVEVKEQRVSNLLQSLMVGGCVAAMPLLKRIPTSVLWGYFAFMAIENLPGNQFWERILLVFTAPSRR YKVLEECHATYVETIPFKTIAVFTVFQTAYLLVCFGITWVPIAGVLFPLMIMLLVPVRQYILPKFFKGAHLQDLDAAEYE EVPALPFELATEGNLSRTASFADDGEILDGMITRSRGEFRRVCSLKVVSSPGTPSKELTGIQSPRFSDKVYSPRVNQLRE NHSPRGVGRGPFSPGEAKPSNLRKSG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 425 | 425 | 3.8E-239 | ||
| PANTHER | 1 | 425 | 425 | 3.8E-239 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Pfam | 3 | 87 | 85 | 2.9E-16 | ||
| Phobius | 6 | 25 | 20 | - | – | |
| Phobius | 26 | 45 | 20 | - | – | |
| Phobius | 46 | 66 | 21 | - | – | |
| TMHMM | 51 | 73 | 23 | - | – | |
| Phobius | 67 | 268 | 202 | - | – | |
| Pfam | 175 | 265 | 91 | 5.2E-19 | ||
| TMHMM | 269 | 291 | 23 | - | – | |
| Phobius | 269 | 295 | 27 | - | – | |
| Phobius | 296 | 426 | 131 | - | – | |
| MobiDBLite | 370 | 399 | 30 | - | – | |
| MobiDBLite | 370 | 426 | 57 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Inorganic anion exchanger activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion A(out) + inorganic anion B(in) = inorganic anion A(in) + inorganic anion B(out). | ||
| Biological process | Anion transport | The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi6g1v0263300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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