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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0347600 |
| Transcript ID | LotjaGi6g1v0347600.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|I1M2K9|I1M2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66036625..66039187) extracted from Lotus japonicus Gifu genome v1.2.
TTAGAAGTATATGAAATTGTGAATGGCGCTGTTTTCCTTGAAGAAGTTGTAATTGTTTTGACTTGTCTTATGCAGGTGAT AGGCAACTCTAAACCAGCATATGTTGGTCACAATTGGTCAAGTTTGTCGCGACCATTCAGGTGCGATTAATTGTCTTGTT TTTGTTAGGAATTGTTTTAGAGATGCTCTGCTTTCGATCATAGATCAAGAGTATTCATTAACACTTTGTCATCGTCGCTG CAGTTCAAGGCCTGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACCAATTCATGTGTTTCTGTTATGGAAGGAA AGGTAAGGCATTCACGCTTTTTATTTTAATTAGTTTGTGTTTGTTTGTTTCCATTTTCCAATACATGTGATGACTTGATT TTATTATATCTTTTTCAGAATCCCAAAGTGATTGAGAATTCTGAAGGTGCACGGACAACACCTTCTGTTGTTGCATTCAA CCAGAAAGGGGAGTTACTTGTGGGCACACCTGCCAAGCGTCAGGCTGTAACTAACCCTGCAAACACTGTATTTGGTACCA AGCGTATGATTGGTAGGCGCTTTGATGATCCTCAAACACAAAAGGAAATGAAAATGGTTCCATATAAGATTGTTAAGGCA CCAAATGGAGATGCGTGGGTTGAAGCTAACGGGCAGCAGTATTCCCCTAGCCAAATTGGTGCATTTGTTCTTACCAAGAT GAAGGAGACGGCAGAAGCATATCTTGGAAAGTCAGTATCCAAGGCTGTTATTACTGTGCCAGCATACTTCAATGATGCTC AGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCGGGTCTTGATGTTCAGAGGATTATCAATGAGCCCACTGCTGCTGCT CTTTCATATGGAATGACCAACAAGGAGGGTCTCATCGCAGTTTTTGATCTTGGTGGTGGAACATTTGATGTGTCCATCTT AGAAATTTCTAATGGTGTTTTTGAGGTATGCGCAAAGTTATTACTACTTTGTTTTCATTTCTTAAACTGTCAGAAGGAAT ATGAAACTTGTATTGACAATACTTTCATGTCTAGGTGAAAGCAACAAATGGTGACACCTTCTTGGGAGGTGAGGATTTTG ATAATGCCTTATTGGACTTTTTGGTGGACGAATTCAAGAGAACAGAGAGCATTGACCTTTCTAAGGATAAGCTTGCTTTG CAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAACTGTCTTCAACATCTCAAACTGAGATTAACCTGCCTTTTAT CACTGCCGACGCATCTGGTGCTAAGCATTTGAACATCACATTGACTAGATCCAAGTTTGAAGCCTTAGTAAATCACTTGA TTGAAAGAACTAAGGCACCATGCAAGAACTGCTTGAAGGATGCAAACATCTCTATCAAGGAAGTTGATGAGGTTCTTCTT GTTGGAGGCATGACCCGTGTGCCTAAAGTTCAAGAGGTGGTTTCAGCAATCTTTGGAAAGTCTCCTAGCAAAGGAGTAAA TCCAGATGAGGCAGTTGCCATGGGAGCAGCAATTCAAGGTGGTATCCTACGTGGAGATGTTAAAGAGCTGCTACTCCTAG ATGTGACGCCACTCTCTCTGGGTATTGAGACTCTGGGTGGTATCTTTACAAGGTTGATCAACAGGAATACTACGATTCCC ACCAAAAAGAGCCAGGTACCCTTAAACATATGATGCTTACTTAATACAATTGTTTCTAAGTTGCAACTATTGGAGAAACG AGATCCAGTAATTCTAAGTAATTGGACACAAGATGTACAATTTGTGTTCATTTGAGTCCCACGTAGAAGTATCTTGACCA CTGCATTGCACACACACATTCAAGGTTTTTAAATAGAGCCTATTCATTTGTTGTGGGTTAAGCTCTTCCTAACTTGTGAT GTCATTGTTTCAGGTCTTTTCAACAGCAGCTGACAATCAAACCCAAGTGGGTATCAAGGTATTACAAGGTGAGAGAGAAA TGGCATCAGACAACAAGAGTCTTGGTGAATTTGAACTTGTCGGCATTCCTCCTGCACCCAGAGGTTTGCCTCAGATTGAG GTCACATTTGACATTGATGCAAACGGGATTGTCACTGTGTCTGCCAAAGACAAGTCCACTGGTAAAGAGCAGCAAATTAC TATCCGGTCATCTGGTGGTCTCTCAGACGATGAAATCGAGAAGATGGTTAAAGAAGCTGAGTTGCATGCTCAGAAGGACC AAGAAAGGAAGGCTCTCATTGATATCAGAAACAGTGCAGATACTAGCATATACAGCATTGAGAAGAGTTTGGGTGAATAC AGAGATAAGATTCCCAGTGAAGTTGCAAAAGAGATTGAGGATGCAGTTTCAGAATTGAGGACGGCGATGTCCGGGGATAA TGCTGATGAAATTAAGTCAAAGCTTGATGCTGCGAATAAAGCAGTCTCAAAGATAGGGGAACACATGTCAGGTGGTGGTT CTAGTGGTGGTTCTTCAACTGGAGGAGGTTCTCAGGGTGGTGACCAAGCTCCAGAGGCAGAATATGAGGAGGTGAAGAAG TGA
CDS sequence (LotjaGi6g1v0347600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGTGATAGGCAACTCTAAACCAGCATATGTTGGTCACAATTGGTCAAGTTTGTCGCGACCATTCAGTTCAAGGCC TGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACCAATTCATGTGTTTCTAATCCCAAAGTGATTGAGAATTCTG AAGGTGCACGGACAACACCTTCTGTTGTTGCATTCAACCAGAAAGGGGAGTTACTTGTGGGCACACCTGCCAAGCGTCAG GCTGTAACTAACCCTGCAAACACTGTATTTGGTACCAAGCGTATGATTGGTAGGCGCTTTGATGATCCTCAAACACAAAA GGAAATGAAAATGGTTCCATATAAGATTGTTAAGGCACCAAATGGAGATGCGTGGGTTGAAGCTAACGGGCAGCAGTATT CCCCTAGCCAAATTGGTGCATTTGTTCTTACCAAGATGAAGGAGACGGCAGAAGCATATCTTGGAAAGTCAGTATCCAAG GCTGTTATTACTGTGCCAGCATACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCGGGTCTTGA TGTTCAGAGGATTATCAATGAGCCCACTGCTGCTGCTCTTTCATATGGAATGACCAACAAGGAGGGTCTCATCGCAGTTT TTGATCTTGGTGGTGGAACATTTGATGTGTCCATCTTAGAAATTTCTAATGGTGTTTTTGAGGTGAAAGCAACAAATGGT GACACCTTCTTGGGAGGTGAGGATTTTGATAATGCCTTATTGGACTTTTTGGTGGACGAATTCAAGAGAACAGAGAGCAT TGACCTTTCTAAGGATAAGCTTGCTTTGCAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAACTGTCTTCAACAT CTCAAACTGAGATTAACCTGCCTTTTATCACTGCCGACGCATCTGGTGCTAAGCATTTGAACATCACATTGACTAGATCC AAGTTTGAAGCCTTAGTAAATCACTTGATTGAAAGAACTAAGGCACCATGCAAGAACTGCTTGAAGGATGCAAACATCTC TATCAAGGAAGTTGATGAGGTTCTTCTTGTTGGAGGCATGACCCGTGTGCCTAAAGTTCAAGAGGTGGTTTCAGCAATCT TTGGAAAGTCTCCTAGCAAAGGAGTAAATCCAGATGAGGCAGTTGCCATGGGAGCAGCAATTCAAGGTGGTATCCTACGT GGAGATGTTAAAGAGCTGCTACTCCTAGATGTGACGCCACTCTCTCTGGGTATTGAGACTCTGGGTGGTATCTTTACAAG GTTGATCAACAGGAATACTACGATTCCCACCAAAAAGAGCCAGGTCTTTTCAACAGCAGCTGACAATCAAACCCAAGTGG GTATCAAGGTATTACAAGGTGAGAGAGAAATGGCATCAGACAACAAGAGTCTTGGTGAATTTGAACTTGTCGGCATTCCT CCTGCACCCAGAGGTTTGCCTCAGATTGAGGTCACATTTGACATTGATGCAAACGGGATTGTCACTGTGTCTGCCAAAGA CAAGTCCACTGGTAAAGAGCAGCAAATTACTATCCGGTCATCTGGTGGTCTCTCAGACGATGAAATCGAGAAGATGGTTA AAGAAGCTGAGTTGCATGCTCAGAAGGACCAAGAAAGGAAGGCTCTCATTGATATCAGAAACAGTGCAGATACTAGCATA TACAGCATTGAGAAGAGTTTGGGTGAATACAGAGATAAGATTCCCAGTGAAGTTGCAAAAGAGATTGAGGATGCAGTTTC AGAATTGAGGACGGCGATGTCCGGGGATAATGCTGATGAAATTAAGTCAAAGCTTGATGCTGCGAATAAAGCAGTCTCAA AGATAGGGGAACACATGTCAGGTGGTGGTTCTAGTGGTGGTTCTTCAACTGGAGGAGGTTCTCAGGGTGGTGACCAAGCT CCAGAGGCAGAATATGAGGAGGTGAAGAAGTGA
Protein sequence (LotjaGi6g1v0347600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQVIGNSKPAYVGHNWSSLSRPFSSRPAGNDVIGIDLGTTNSCVSNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQ AVTNPANTVFGTKRMIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSK AVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMTNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNG DTFLGGEDFDNALLDFLVDEFKRTESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRS KFEALVNHLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQEVVSAIFGKSPSKGVNPDEAVAMGAAIQGGILR GDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIP PAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSI YSIEKSLGEYRDKIPSEVAKEIEDAVSELRTAMSGDNADEIKSKLDAANKAVSKIGEHMSGGGSSGGSSTGGGSQGGDQA PEAEYEEVKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 649 | 633 | 0.0 | ||
| PANTHER | 17 | 649 | 633 | 0.0 | – | |
| Hamap | 29 | 648 | 620 | 35.261 | ||
| CDD | 29 | 399 | 371 | 0.0 | – | |
| PRINTS | 31 | 44 | 14 | 4.8E-80 | – | |
| Pfam | 32 | 619 | 588 | 8.0E-268 | ||
| TIGRFAM | 32 | 619 | 588 | 3.3E-281 | ||
| SUPERFAMILY | 32 | 207 | 176 | 8.09E-61 | ||
| Gene3D | 33 | 395 | 363 | 3.3E-156 | – | |
| ProSitePatterns | 35 | 42 | 8 | - | ||
| PRINTS | 54 | 66 | 13 | 4.8E-80 | – | |
| PRINTS | 77 | 85 | 9 | 4.8E-80 | – | |
| PRINTS | 161 | 181 | 21 | 4.8E-80 | – | |
| Gene3D | 203 | 383 | 181 | 3.3E-156 | – | |
| SUPERFAMILY | 208 | 399 | 192 | 1.23E-66 | ||
| ProSitePatterns | 213 | 226 | 14 | - | ||
| PRINTS | 219 | 229 | 11 | 4.8E-80 | – | |
| Gene3D | 246 | 333 | 88 | 3.3E-156 | – | |
| Coils | 269 | 296 | 28 | - | – | |
| PRINTS | 351 | 367 | 17 | 4.8E-80 | – | |
| ProSitePatterns | 354 | 368 | 15 | - | ||
| PRINTS | 382 | 402 | 21 | 4.8E-80 | – | |
| Gene3D | 396 | 523 | 128 | 2.6E-60 | ||
| SUPERFAMILY | 401 | 557 | 157 | 3.14E-61 | ||
| PRINTS | 405 | 424 | 20 | 4.8E-80 | – | |
| PRINTS | 486 | 502 | 17 | 4.8E-80 | – | |
| Gene3D | 524 | 621 | 98 | 3.5E-29 | ||
| SUPERFAMILY | 551 | 623 | 73 | 9.42E-5 | ||
| MobiDBLite | 612 | 650 | 39 | - | – | |
| MobiDBLite | 622 | 636 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi6g1v0347600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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