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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0354300 |
Transcript ID | LotjaGi6g1v0354300.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Sulfate transporter, putative; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|P53392|SUT2_STYHA High affinity sulfate transporter 2; TrEMBL-Plants: tr|D4IIA7|D4IIA7_ASTGL Sulphate transporter; Found in the gene: LotjaGi6g1v0354300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66627136..66632194) extracted from Lotus japonicus Gifu genome v1.2.
TTTCGAACAATTTCTGGCTCTCTCTATATATAACATGCCTTTGCTTCCTTACAAAACCAAGTTCACTGAATATCTGCTTG GGTAATACATTAGGTACTTCACTTTCCTTTGGTTTCAATCACATGATTTCCATTAATAATCTAACATAAACTTCACATGA CAAAATGTGACAATGGATGCAGCTTTATTAAGCAACTGACTCTGAAACAGATTTTCCCACTAACAAAAACTACTTTGAAT GTGTTCTTTTCATTGCAGTTGTGTAAATGAGTCAGGTTTTCACAGACGAGGTTGTGGCAAGAGCCATGGAGGACACAGGA AGCGCGCCTTCTTCACGCAGACATCATGGTTTGCCACACATTCATAAGGTGGGAACTGCTCCTAAGCAGACACTTTACCA AGAGATCAAACATTCTGTTAAGGAGACCTTCTTCTTTGACGACCCCTTAAGCCAATTTAAGGGCCAAAGCAGGAAAAGAA AGCTTGTTTTGGGCATGCAATCTGTCTTCCCCATTGTTGAATGGGGAAGAGATTACAATCTTCAAAAGTTCAAGGGTGAT TTCATCGCTGGACTCACCATTGCAAGTCTATGTATTCCTCAGGTGAGTAGTAACGTTTGAATGGTGTTGTTATTTATATA TAGGAACCTATGACCTAGTCTAAATAAGGCACAAACGTAGGATAAATTAATAACTAATCCAGCACTAGGCTTTCAAGAAG GTCCGTTAGACGCAGAAAAAAAAGTCTAGGACAAGTAATAAGCTAGACTTAGGTTGTAAAATACTTAAGCAAACTAGACC TATTTACACAAAAGCTAACTCGACCTAACTTATTCTCACCCCTATTTGTATATTTTTCCCATGAATATTGGTATGAGTTT TTGGATGATGTATAACAGGACATTGCATACGCAAAGCTTGCAAATTTGAACCCTGAGCATGCACTGTGTGAGTATCTTGG TTCATTTTAAGCAACTTTTGACATGTTGGTTCATCACATAGATGTCCCTCTCTTCAGTTTCATGACTTGTTTTTCTTTCT GTGTGTGCAGACACAAGCTTTGTGGCTCCTCTTGTCTATGCATTCATGGGAACCTCCAGAGATATTGCCATAGGACCTGT AGCCGTGGTGTCCCTCTTGCTTGGGACTATGCTTACCGATGAGATTGCCGACTCTAAAAACCCTGACTACCTACGTCTTG CATATACTGCCACCTTCTTCGCAGGAATCACTCAATTGGCACTAGGATTTTTCAGGTATAGTGTCGAGAAGTCTCACATT AGCTAGAGATATAGCTAAAATAGTTCAAAGTTTTCGATATATGATTCTTGTGTTGCAATCTATGCATGACTTTGCAGGCT TGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATTGTGGGATTCATGGGTGGAGCTGCCATCACTATTGCACTGCAAC AGCTTAAAGGTCTACTAGGCTTAAAAACTTTCACAAAGAAAACTGATATTGTTTCTGTTATGCGCTCGGTTTGGAAACCA GTGGAACATGGGGTAAAGCTTCATCTTTATTTGATATTCTCCTTCAGTGTTGTAGATAAAACCTCACAAACCTTTTCTTT TTCCTTTGCTGACAGTGGAATTGGGAGACTATAGTCATTGGAATGTCATTCTTGGTCTTCATTCTTATAACAAATTATAT TGTAAGAATGCAACAATTTTTCTTCTTCTCTTCCTCTCCATTAGAACTTTCATAACTGTTCTGTTGTGATGAACAGGCCA AAAAGAATAAGAAACTCTTTTGGGTGGCCGCAATCGCTCCTATGATCTCTGTTGTAGTGTCTACCTTTTGTGTGTACATT ACCAGGGCTGACAAGAAAGGAGTGGCGATTGTAAGTAGCCAAAATTGCTTGACTAGTTAAACAAAATTAAACACTGTAAG TGTAAACTCAATGTATGCTATTTCAGGTGAAACATATAAAAGAAGGTGTGAATCCTGCATCTGCTAGTGAAATATTTTTC AGTGGAGAATATTTTGGTGCTGGTGTTAAGATTGGTGTGGTATCTGGTATGGTAGCACTCACGGTAAGCAAATTTCTCCT CATGACTTGTTTCATTTCTGAGACTCTGCTAGACACTTAATTGAGTCAAATTCTTTGAACATTAGGAAGCTGTAGCGATT GCGAGAACATTTGCTGCCATGAAAGACTATTCAATCGATGGTAATAAAGAAATGGTGGCAATGGGAACAATGAACATTGT TGGTTCCTTGACATCTTCTTATGTGGCTACAGGTACCCAAGAGGACACACTCACTCAATCCTGTTTGAATTGAACCTATC ATCACTTTGATCTTAATAAGTGTTTTTGATCTCTATGCAGGGTCTTTTTCGCGCTCAGCAGTGAACTACATGGCTGGTTG TAAAACTGCTGTATCAAACATTGTTATGTCCATGGTCTTATTACTAACTCTGCTAGTTATCACACCTCTATTTAAGTACA CTCCAAATGCTGTCCTCGCTTCAATTATCATAGCAGCTGTGATGAACCTGGTTGACGTTCAAGCAGCTATTCTTCTGTGG AAGATTGACAAATTCGACTTTGTGGCTTGCATGGGAGCCTTCTTTGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCT TATCGCGGTAATGAAAACATTAAGAGAAATTCAAAAGAAAATATTACATCTCCAATTCACCTTATCCACAATATTTAGTA CTTACTTGACCTCTTTTATGCAGGTGGCAATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGCAATA CTTGGGAAGCTTTCAGGGACTAAAGTTTACAGGAATATCCTTCAATATCCCAAAGCAACCCAGATTCCTGGCATGTTGAT TATCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGACAGGTATAAGTATAACATTAACATACACA ATCCCAGATCAAGGTTCAGAAAATGTAGATTTGCTTAGCTTATTAATGAAACTAAGTTTGGTGATTAACTAAATCATACT TCACAGAATTTTGAAGTGGGTGACTGATGAAGAGGTCCAAAGGACAGCGAGCGAATTTCCCAGCATACAGTCTCTCATTG TTGAAATGTCACGTAAGGCTTTACATGATATCCTTCCATCATGATATTCGTGATTAATTTGGATGAATGAATTTATTCAC TTGCAATATTCTTGCAGCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTGGAAGATTTATTTAAGAGCCTTAAGA AAAGAGAAGTGCAGGTAATAAATAATCACATAATTCAACATTTTTTACATGGTTAGTCATTTCTGTGGGAAATCATCTGG AAAATCTCTAGTTGCAGATCAAGCTTAACTCTCTGCGTGTTGTATTTACTTGGCAAAGATTCAAAACATTGATACAACCA TGCTCCTTATGCAATAGCTTAAGTCAACCAACTAATCAATTGAATTCATCTTTAATGATATTATTATGTACAAAATAACT TCAGCTTGTAATAAATCATTGTGATGATGTTCATATCTGTGGCCTTTTTACAGCTTCTCCTGGCAAACCCGGGGCCAATT GTGATAGAGAAGCTCCATGCCTCCAAGTTATCGGACATAATTGGGGAAGATAAAATATTTTCATCAGTGGATGATGCCGT TGCAACTTTTGGTCCAAAGGGTGAAGTAAAGTAACTGTTTCAACATGTTTAAGCCAAAGATGCAAAAGTGGTTTGTAGTT TCATAGGAAAGCTAATGGGTATAGATTTGTATTCAGTTGATGTGATTCTCTTAAGCCAACTCGTTTGTAGTTTTGTTGTG ATTCTCTTGATTTCTACTTCAGTTGATGTGATGTATAAAATAGGCTTAATCCAGTTTTTGGTCCCCATCTTTTGTCATAA ATATGGCTTTAGTCCCTCGCCGGAGCAAAGGTGGGGAGGTCCCCAGTTTTTGGCAAAATAGTTGGCTTTGGTCCCTCCGG CCGGTTGGGTCAACGCCGGAGCTCCGCCGGCTGACGTGGCCGGTGCCACGTCAATTAATGAGGCCAGCTGGATTTTTTTT TTCCTTTTTTCATTAAATTTAAATAAAATTAAAACTTACTAATTATCTTACTAATTATTTACATATTTTAATAAAAAAAA TACAAATTAAATAGAAGAAGATGGACTCAAAGCAGACGACACCCTCAAAGCACCCAAAGCTTCTACTTCTTCGTCTTCTT CATGCTAAAGAAGAATTAGGGTTTCTGAGTTCATATTCATCTCTGTTCTTCATATCTGTTCTTCATCTTTGTTCCTCATC TCTGTTCTTCATCTTTGTTCCTCATCTCTGTTCTTCATCTCTCGTCCTTCCTCATTCTCTGGCCAATTGTGCAAATGTCT CAAACGTCAAGGGAATCTCGATCTGGTTCAAAATCTTCTTCTTCCATTGCTGTTCGACGCACAATGATACGACGTGGGAG GTGTAATTGCGGAGACCTGGTAGTGTATTTGACTTCCCACACTGATATTAACCCGAATAGAAATTTCTGGAGATGCAGAC ATTTCTTGGTAAGCCATTTATGTCTTTGTTATGTTGTTACTGAAATTATCATTGTTCTTTTTAATTTTTGAGCCTAATGA GTAAAGTGCTTTTATTCGATTTTATCTCAGAGACCAAATGACTGTGGCTTTTTTCTATGGGATGATGAGTCTGGCTTAGA TGGTGCAGAGAGACAAAATGTAATTGAAGGGGTGAAAACATTTGAAGAATTGGAGGATATGAAAAGGAGATTGGCAGAAA GACAGATGGAATTGGAGGCTACGAAGAGGAAGTGGGAGGACACTTTGACCAAATTGGAGGACATGAAGACCAAATTGGAG GATAGCCAGTTGAAGATTGTCAATCTGCAATGGAACCTTAAATGAGAAATTCAGAAGAATAACTTGGCAATTTTGACATG TATTATGTTGTTTGTAGTGGTTGTATGGCTTCGTGTGTAATGGATTGTGGTGGATGTAACCGTAGTGGAGTGTAGCAGTA ATCTAAACCTTACATTTTG
CDS sequence (LotjaGi6g1v0354300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTCAGGTTTTCACAGACGAGGTTGTGGCAAGAGCCATGGAGGACACAGGAAGCGCGCCTTCTTCACGCAGACATCA TGGTTTGCCACACATTCATAAGGTGGGAACTGCTCCTAAGCAGACACTTTACCAAGAGATCAAACATTCTGTTAAGGAGA CCTTCTTCTTTGACGACCCCTTAAGCCAATTTAAGGGCCAAAGCAGGAAAAGAAAGCTTGTTTTGGGCATGCAATCTGTC TTCCCCATTGTTGAATGGGGAAGAGATTACAATCTTCAAAAGTTCAAGGGTGATTTCATCGCTGGACTCACCATTGCAAG TCTATGTATTCCTCAGGACATTGCATACGCAAAGCTTGCAAATTTGAACCCTGAGCATGCACTGTACACAAGCTTTGTGG CTCCTCTTGTCTATGCATTCATGGGAACCTCCAGAGATATTGCCATAGGACCTGTAGCCGTGGTGTCCCTCTTGCTTGGG ACTATGCTTACCGATGAGATTGCCGACTCTAAAAACCCTGACTACCTACGTCTTGCATATACTGCCACCTTCTTCGCAGG AATCACTCAATTGGCACTAGGATTTTTCAGGCTTGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATTGTGGGATTCA TGGGTGGAGCTGCCATCACTATTGCACTGCAACAGCTTAAAGGTCTACTAGGCTTAAAAACTTTCACAAAGAAAACTGAT ATTGTTTCTGTTATGCGCTCGGTTTGGAAACCAGTGGAACATGGGTGGAATTGGGAGACTATAGTCATTGGAATGTCATT CTTGGTCTTCATTCTTATAACAAATTATATTGCCAAAAAGAATAAGAAACTCTTTTGGGTGGCCGCAATCGCTCCTATGA TCTCTGTTGTAGTGTCTACCTTTTGTGTGTACATTACCAGGGCTGACAAGAAAGGAGTGGCGATTGTGAAACATATAAAA GAAGGTGTGAATCCTGCATCTGCTAGTGAAATATTTTTCAGTGGAGAATATTTTGGTGCTGGTGTTAAGATTGGTGTGGT ATCTGGTATGGTAGCACTCACGGAAGCTGTAGCGATTGCGAGAACATTTGCTGCCATGAAAGACTATTCAATCGATGGTA ATAAAGAAATGGTGGCAATGGGAACAATGAACATTGTTGGTTCCTTGACATCTTCTTATGTGGCTACAGGGTCTTTTTCG CGCTCAGCAGTGAACTACATGGCTGGTTGTAAAACTGCTGTATCAAACATTGTTATGTCCATGGTCTTATTACTAACTCT GCTAGTTATCACACCTCTATTTAAGTACACTCCAAATGCTGTCCTCGCTTCAATTATCATAGCAGCTGTGATGAACCTGG TTGACGTTCAAGCAGCTATTCTTCTGTGGAAGATTGACAAATTCGACTTTGTGGCTTGCATGGGAGCCTTCTTTGGTGTG ATCTTCAAAAGTGTTGAGATTGGCCTTCTTATCGCGGTGGCAATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCC AAGGACTGCAATACTTGGGAAGCTTTCAGGGACTAAAGTTTACAGGAATATCCTTCAATATCCCAAAGCAACCCAGATTC CTGGCATGTTGATTATCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGACAGAATTTTGAAGTGG GTGACTGATGAAGAGGTCCAAAGGACAGCGAGCGAATTTCCCAGCATACAGTCTCTCATTGTTGAAATGTCACCTGTTAC TGATATTGACACAAGTGGCATCCATGCCTTGGAAGATTTATTTAAGAGCCTTAAGAAAAGAGAAGTGCAGCTTCTCCTGG CAAACCCGGGGCCAATTGTGATAGAGAAGCTCCATGCCTCCAAGTTATCGGACATAATTGGGGAAGATAAAATATTTTCA TCAGTGGATGATGCCGTTGCAACTTTTGGTCCAAAGGGTGAAGTAAAGTAA
Protein sequence (LotjaGi6g1v0354300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQVFTDEVVARAMEDTGSAPSSRRHHGLPHIHKVGTAPKQTLYQEIKHSVKETFFFDDPLSQFKGQSRKRKLVLGMQSV FPIVEWGRDYNLQKFKGDFIAGLTIASLCIPQDIAYAKLANLNPEHALYTSFVAPLVYAFMGTSRDIAIGPVAVVSLLLG TMLTDEIADSKNPDYLRLAYTATFFAGITQLALGFFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGLKTFTKKTD IVSVMRSVWKPVEHGWNWETIVIGMSFLVFILITNYIAKKNKKLFWVAAIAPMISVVVSTFCVYITRADKKGVAIVKHIK EGVNPASASEIFFSGEYFGAGVKIGVVSGMVALTEAVAIARTFAAMKDYSIDGNKEMVAMGTMNIVGSLTSSYVATGSFS RSAVNYMAGCKTAVSNIVMSMVLLLTLLVITPLFKYTPNAVLASIIIAAVMNLVDVQAAILLWKIDKFDFVACMGAFFGV IFKSVEIGLLIAVAISFAKILLQVTRPRTAILGKLSGTKVYRNILQYPKATQIPGMLIIRVDSAIYFSNSNYIKDRILKW VTDEEVQRTASEFPSIQSLIVEMSPVTDIDTSGIHALEDLFKSLKKREVQLLLANPGPIVIEKLHASKLSDIIGEDKIFS SVDDAVATFGPKGEVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 125 | 125 | - | – | |
PANTHER | 25 | 654 | 630 | 0.0 | ||
PANTHER | 25 | 654 | 630 | 0.0 | – | |
TIGRFAM | 82 | 645 | 564 | 1.5E-216 | ||
Pfam | 95 | 474 | 380 | 1.4E-126 | ||
Phobius | 126 | 141 | 16 | - | – | |
Phobius | 142 | 146 | 5 | - | – | |
TMHMM | 147 | 164 | 18 | - | – | |
Phobius | 147 | 163 | 17 | - | – | |
Phobius | 164 | 174 | 11 | - | – | |
Phobius | 175 | 198 | 24 | - | – | |
TMHMM | 179 | 201 | 23 | - | – | |
Phobius | 199 | 203 | 5 | - | – | |
Phobius | 204 | 223 | 20 | - | – | |
TMHMM | 204 | 226 | 23 | - | – | |
Phobius | 224 | 255 | 32 | - | – | |
TMHMM | 255 | 277 | 23 | - | – | |
Phobius | 256 | 278 | 23 | - | – | |
Phobius | 279 | 283 | 5 | - | – | |
Phobius | 284 | 305 | 22 | - | – | |
TMHMM | 284 | 306 | 23 | - | – | |
Phobius | 306 | 412 | 107 | - | – | |
TMHMM | 337 | 359 | 23 | - | – | |
TMHMM | 412 | 431 | 20 | - | – | |
Phobius | 413 | 434 | 22 | - | – | |
Phobius | 435 | 439 | 5 | - | – | |
Phobius | 440 | 463 | 24 | - | – | |
TMHMM | 441 | 463 | 23 | - | – | |
Phobius | 464 | 469 | 6 | - | – | |
Phobius | 470 | 498 | 29 | - | – | |
TMHMM | 476 | 498 | 23 | - | – | |
Phobius | 499 | 656 | 158 | - | – | |
Gene3D | 506 | 650 | 145 | 3.9E-39 | ||
ProSiteProfiles | 526 | 649 | 124 | 29.165 | ||
CDD | 527 | 642 | 116 | 2.62098E-26 | – | |
Pfam | 527 | 645 | 119 | 3.5E-32 | ||
SUPERFAMILY | 528 | 650 | 123 | 8.63E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0354300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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