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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001902
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We have found 53 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.973s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0776860.1
LjSst1 sst1 protein [Lotus japonicus] gi|112362444|emb|CAL36108.1| chr2 12152266 12158043 -
2 domain predictions
4 GO terms
Lj0g3v0112459.1
n.a. sulphate transporter [Astragalus glycyphyllos] gi|291482268|emb|CBK55656.1| chr0 48969726 48979585 -
3 domain predictions
4 GO terms
Lj0g3v0201169.1
n.a. PREDICTED: low affinity sulfate transporter 3-like [Cicer arietinum] gi|502095044|ref|XP_004490361.1| chr0 99414336 99415231 +
2 domain predictions
4 GO terms
Lj0g3v0223519.1
n.a. PREDICTED: probable sulfate transporter 3.3-like [Glycine max] gi|356519768|ref|XP_003528541.1| chr0 115263589 115265144 -
2 domain predictions
4 GO terms
Lj0g3v0223539.1
n.a. PREDICTED: probable sulfate transporter 3.3-like [Glycine max] gi|356575898|ref|XP_003556073.1| chr0 115273023 115280355 -
3 domain predictions
4 GO terms
Lj0g3v0223539.2
n.a. PREDICTED: probable sulfate transporter 3.3-like [Glycine max] gi|356575898|ref|XP_003556073.1| chr0 115273023 115276893 -
2 domain predictions
4 GO terms
Lj0g3v0301459.1
n.a. Sulfate transporter [Medicago truncatula] gi|357489361|ref|XP_003614968.1| chr0 156693936 156700947 -
3 domain predictions
4 GO terms
Lj0g3v0333429.1
n.a. PREDICTED: low affinity sulfate transporter 3-like [Glycine max] gi|356515820|ref|XP_003526596.1| chr0 174458692 174467027 +
3 domain predictions
4 GO terms
Lj0g3v0349169.1
n.a. PREDICTED: sulfate transporter 1.3-like [Glycine max] gi|356515816|ref|XP_003526594.1| chr0 183308278 183312890 -
3 domain predictions
4 GO terms
Lj1g3v3183510.1
n.a. PREDICTED: sulfate transporter 4.1, chloroplastic-like [Glycine max] gi|356568949|ref|XP_003552670.1| chr1 36246529 36254591 +
3 domain predictions
4 GO terms
Lj1g3v4446910.1
n.a. PREDICTED: sulfate transporter 3.1-like [Glycine max] gi|356504955|ref|XP_003521258.1| chr1 51962921 51971970 -
3 domain predictions
4 GO terms
Lj3g3v0140650.1
n.a. PREDICTED: probable sulfate transporter 3.4-like isoform 1 [Glycine max] gi|356556062|ref|XP_003546346.1| chr3 1143508 1149247 +
3 domain predictions
4 GO terms
Lj3g3v0140650.2
n.a. PREDICTED: probable sulfate transporter 3.4-like isoform 1 [Glycine max] gi|356556062|ref|XP_003546346.1| chr3 1146293 1149247 +
2 domain predictions
4 GO terms
Lj3g3v2261380.1
n.a. PREDICTED: probable sulfate transporter 3.4-like [Glycine max] gi|356522172|ref|XP_003529722.1| chr3 27900689 27905923 +
3 domain predictions
4 GO terms
Lj4g3v0338230.1
n.a. sulphate transporter [Astragalus glycyphyllos] gi|291482268|emb|CBK55656.1| chr4 4311291 4314959 +
3 domain predictions
4 GO terms
Lj4g3v0643640.1
n.a. PREDICTED: probable sulfate transporter 3.3-like [Glycine max] gi|356521546|ref|XP_003529415.1| chr4 10205950 10207137 -
2 domain predictions
4 GO terms
Lj5g3v1003430.1
n.a. PREDICTED: sulfate transporter 3.1-like [Glycine max] gi|356536292|ref|XP_003536673.1| chr5 15831291 15839219 -
3 domain predictions
4 GO terms
Lj6g3v0527180.1
n.a. PREDICTED: sulfate transporter 2.1-like [Glycine max] gi|356540077|ref|XP_003538517.1| chr6 5301509 5318280 -
3 domain predictions
4 GO terms
LotjaGi1g1v0149100.1
n.a. Sulfate transporter 1; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3; TrEMBL-Plants: tr|G7KA24|G7KA24_MEDTR High affinity sulfate transporter; Found in the gene: LotjaGi1g1v0149100 LjG1.1_chr1 25547746 25555077 -
3 domain predictions
4 GO terms
LotjaGi1g1v0149100.2
n.a. Sulfate transporter 1; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3; TrEMBL-Plants: tr|G7KA24|G7KA24_MEDTR High affinity sulfate transporter; Found in the gene: LotjaGi1g1v0149100 LjG1.1_chr1 25548145 25553064 -
3 domain predictions
4 GO terms
LotjaGi1g1v0149100.3
n.a. Sulfate transporter 1; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3; TrEMBL-Plants: tr|G7KA24|G7KA24_MEDTR High affinity sulfate transporter; Found in the gene: LotjaGi1g1v0149100 LjG1.1_chr1 25548145 25553095 -
3 domain predictions
4 GO terms
LotjaGi1g1v0149100.4
n.a. Sulfate transporter; TAIR: AT1G78000.7 sulfate transporter 1;2; Swiss-Prot: sp|P53391|SUT1_STYHA High affinity sulfate transporter 1; TrEMBL-Plants: tr|A0A0K1U4B3|A0A0K1U4B3_PEA Sulfate transporter 1.3-like protein; Found in the gene: LotjaGi1g1v0149100 LjG1.1_chr1 25549294 25549980 -
2 domain predictions
4 GO terms
LotjaGi1g1v0149100.5
n.a. Sulfate transporter 1; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3; TrEMBL-Plants: tr|G7KA24|G7KA24_MEDTR High affinity sulfate transporter; Found in the gene: LotjaGi1g1v0149100 LjG1.1_chr1 25549294 25553142 -
3 domain predictions
4 GO terms
LotjaGi1g1v0149200.1
n.a. Sulfate transporter, putative; TAIR: AT5G10180.1 slufate transporter 2;1; Swiss-Prot: sp|P53393|SUT3_STYHA Low affinity sulfate transporter 3; TrEMBL-Plants: tr|G7KA22|G7KA22_MEDTR Sulfate/bicarbonate/oxalate exchanger and transporter sat-1; Found in the gene: LotjaGi1g1v0149200 LjG1.1_chr1 25584261 25601170 +
3 domain predictions
4 GO terms
LotjaGi1g1v0149200.2
n.a. Sulfate transporter, putative; TAIR: AT5G10180.1 slufate transporter 2;1; Swiss-Prot: sp|P53393|SUT3_STYHA Low affinity sulfate transporter 3; TrEMBL-Plants: tr|G7KA22|G7KA22_MEDTR Sulfate/bicarbonate/oxalate exchanger and transporter sat-1; Found in the gene: LotjaGi1g1v0149200 LjG1.1_chr1 25584764 25600608 +
3 domain predictions
4 GO terms
LotjaGi1g1v0246500.1
n.a. Sulfate transporter 1; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3; TrEMBL-Plants: tr|I1KA20|I1KA20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246500 LjG1.1_chr1 59234678 59240681 -
3 domain predictions
4 GO terms
LotjaGi1g1v0246500.2
n.a. Sulfate transporter 1; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3; TrEMBL-Plants: tr|I1KA20|I1KA20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246500 LjG1.1_chr1 59234678 59241512 -
3 domain predictions
4 GO terms
LotjaGi1g1v0246500.3
n.a. Sulfate transporter 1; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3; TrEMBL-Plants: tr|I1KA20|I1KA20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246500 LjG1.1_chr1 59235524 59239591 -
3 domain predictions
4 GO terms
LotjaGi1g1v0246700_LC.1
n.a. Sulfate transporter, putative; TAIR: AT5G10180.1 slufate transporter 2;1; Swiss-Prot: sp|P53393|SUT3_STYHA Low affinity sulfate transporter 3; TrEMBL-Plants: tr|A0A151SDQ6|A0A151SDQ6_CAJCA Low affinity sulfate transporter 3; Found in the gene: LotjaGi1g1v0246700_LC LjG1.1_chr1 59294690 59316075 +
3 domain predictions
4 GO terms
LotjaGi1g1v0716100.1
n.a. Sulfate transporter; TAIR: AT3G51895.1 sulfate transporter 3;1; Swiss-Prot: sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1; TrEMBL-Plants: tr|I1JNX0|I1JNX0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0716100 LjG1.1_chr1 128460567 128468049 +
3 domain predictions
4 GO terms
LotjaGi1g1v0716100.2
n.a. Sulfate transporter 1; TAIR: AT3G51895.1 sulfate transporter 3;1; Swiss-Prot: sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1; TrEMBL-Plants: tr|I1JNX0|I1JNX0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0716100 LjG1.1_chr1 128460790 128467564 +
2 domain predictions
4 GO terms
LotjaGi1g1v0716100.3
n.a. Sulfate transporter 1; TAIR: AT3G51895.2 sulfate transporter 3;1; Swiss-Prot: sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1; TrEMBL-Plants: tr|I1JNX0|I1JNX0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0716100 LjG1.1_chr1 128460790 128467564 +
2 domain predictions
4 GO terms
LotjaGi2g1v0213700.1
n.a. Sulfate transporter, putative; TAIR: AT5G19600.1 sulfate transporter 3;5; Swiss-Prot: sp|Q94LW6|SUT35_ARATH Probable sulfate transporter 3.5; TrEMBL-Plants: tr|Q0P7I2|Q0P7I2_LOTJA Sst1 protein; Found in the gene: LotjaGi2g1v0213700 LjG1.1_chr2 66337378 66344666 -
3 domain predictions
4 GO terms
LotjaGi2g1v0263100.1
n.a. Sulfate transporter; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|P53392|SUT2_STYHA High affinity sulfate transporter 2; TrEMBL-Plants: tr|D4IIA7|D4IIA7_ASTGL Sulphate transporter; Found in the gene: LotjaGi2g1v0263100 LjG1.1_chr2 73228646 73233431 +
3 domain predictions
4 GO terms
LotjaGi2g1v0263100.2
n.a. Sulfate transporter; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|P53392|SUT2_STYHA High affinity sulfate transporter 2; TrEMBL-Plants: tr|D4IIA7|D4IIA7_ASTGL Sulphate transporter; Found in the gene: LotjaGi2g1v0263100 LjG1.1_chr2 73228670 73232756 +
3 domain predictions
4 GO terms
LotjaGi2g1v0263100.3
n.a. Sulfate transporter; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|P53392|SUT2_STYHA High affinity sulfate transporter 2; TrEMBL-Plants: tr|D4IIA7|D4IIA7_ASTGL Sulphate transporter; Found in the gene: LotjaGi2g1v0263100 LjG1.1_chr2 73231200 73232368 +
2 domain predictions
4 GO terms
LotjaGi3g1v0015900.1
n.a. Sulfate transporter, putative; TAIR: AT3G15990.1 sulfate transporter 3;4; Swiss-Prot: sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4; TrEMBL-Plants: tr|A0A072VDQ1|A0A072VDQ1_MEDTR Sulfate/bicarbonate/oxalate exchanger and transporter sat-1; Found in the gene: LotjaGi3g1v0015900 LjG1.1_chr3 1677886 1687708 +
3 domain predictions
4 GO terms
LotjaGi3g1v0015900.2
n.a. Sulfate transporter, putative; TAIR: AT3G15990.1 sulfate transporter 3;4; Swiss-Prot: sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4; TrEMBL-Plants: tr|A0A072VDQ1|A0A072VDQ1_MEDTR Sulfate/bicarbonate/oxalate exchanger and transporter sat-1; Found in the gene: LotjaGi3g1v0015900 LjG1.1_chr3 1678552 1683586 +
3 domain predictions
4 GO terms
LotjaGi3g1v0362200.1
n.a. Sulfate transporter, putative; TAIR: AT3G15990.1 sulfate transporter 3;4; Swiss-Prot: sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4; TrEMBL-Plants: tr|A0A151SHG0|A0A151SHG0_CAJCA Putative sulfate transporter 3.4; Found in the gene: LotjaGi3g1v0362200 LjG1.1_chr3 74607661 74612839 +
3 domain predictions
4 GO terms
LotjaGi3g1v0362200.2
n.a. Sulfate transporter, putative; TAIR: AT3G15990.1 sulfate transporter 3;4; Swiss-Prot: sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4; TrEMBL-Plants: tr|A0A151SHG0|A0A151SHG0_CAJCA Putative sulfate transporter 3.4; Found in the gene: LotjaGi3g1v0362200 LjG1.1_chr3 74607714 74616199 +
2 domain predictions
4 GO terms
LotjaGi3g1v0362200.3
n.a. Sulfate transporter, putative; TAIR: AT3G15990.1 sulfate transporter 3;4; Swiss-Prot: sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4; TrEMBL-Plants: tr|A0A151SHG0|A0A151SHG0_CAJCA Putative sulfate transporter 3.4; Found in the gene: LotjaGi3g1v0362200 LjG1.1_chr3 74608300 74612522 +
3 domain predictions
4 GO terms
LotjaGi4g1v0080800.1
n.a. Sulfate transporter, putative; TAIR: AT1G23090.1 sulfate transporter 91; Swiss-Prot: sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3; TrEMBL-Plants: tr|A0A0B2SD55|A0A0B2SD55_GLYSO Putative sulfate transporter 3.3; Found in the gene: LotjaGi4g1v0080800 LjG1.1_chr4 10539487 10543396 -
3 domain predictions
4 GO terms
LotjaGi4g1v0080800.2
n.a. Sulfate transporter, putative; TAIR: AT1G23090.1 sulfate transporter 91; Swiss-Prot: sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3; TrEMBL-Plants: tr|A0A0B2SD55|A0A0B2SD55_GLYSO Putative sulfate transporter 3.3; Found in the gene: LotjaGi4g1v0080800 LjG1.1_chr4 10539487 10543396 -
3 domain predictions
4 GO terms
LotjaGi4g1v0080800.3
n.a. Sulfate transporter, putative; TAIR: AT1G23090.1 sulfate transporter 91; Swiss-Prot: sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3; TrEMBL-Plants: tr|A0A072UM70|A0A072UM70_MEDTR Sulfate/bicarbonate/oxalate exchanger and transporter sat-1; Found in the gene: LotjaGi4g1v0080800 LjG1.1_chr4 10539501 10544506 -
3 domain predictions
4 GO terms
LotjaGi4g1v0081000.1
n.a. Sulfate transporter, putative; TAIR: AT1G23090.1 sulfate transporter 91; Swiss-Prot: sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3; TrEMBL-Plants: tr|I1ND92|I1ND92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0081000 LjG1.1_chr4 10548505 10555995 -
3 domain predictions
4 GO terms
LotjaGi4g1v0081000.2
n.a. Sulfate transporter, putative; TAIR: AT1G23090.1 sulfate transporter 91; Swiss-Prot: sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3; TrEMBL-Plants: tr|I1ND92|I1ND92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0081000 LjG1.1_chr4 10548632 10556083 -
3 domain predictions
4 GO terms
LotjaGi4g1v0081000.3
n.a. Sulfate transporter, putative; TAIR: AT1G23090.1 sulfate transporter 91; Swiss-Prot: sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3; TrEMBL-Plants: tr|K7L351|K7L351_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0081000 LjG1.1_chr4 10548960 10555939 -
2 domain predictions
4 GO terms
LotjaGi5g1v0170400.1
n.a. Sulfate transporter 1; TAIR: AT3G51895.1 sulfate transporter 3;1; Swiss-Prot: sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1; TrEMBL-Plants: tr|A0A0B2P882|A0A0B2P882_GLYSO Sulfate transporter 3.1; Found in the gene: LotjaGi5g1v0170400 LjG1.1_chr5 43825685 43833930 -
3 domain predictions
4 GO terms
LotjaGi5g1v0170400.2
n.a. Sulfate transporter 1; TAIR: AT3G51895.1 sulfate transporter 3;1; Swiss-Prot: sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1; TrEMBL-Plants: tr|A0A1J7GNV6|A0A1J7GNV6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0170400 LjG1.1_chr5 43825983 43833618 -
3 domain predictions
4 GO terms
LotjaGi6g1v0085600.1
n.a. Sulfate transporter; TAIR: AT5G10180.1 slufate transporter 2;1; Swiss-Prot: sp|O04722|SUT21_ARATH Sulfate transporter 2.1; TrEMBL-Plants: tr|I1LN03|I1LN03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0085600 LjG1.1_chr6 17002744 17019641 -
3 domain predictions
4 GO terms