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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003609
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 150 results. Now displaying 2 of 3 with 50 rows per page. This search has taken 5.728s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v2888270.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Cicer arietinum] gi|502165379|ref|XP_004513553.1| chr3 35692151 35699684 +
2 domain predictions
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Lj3g3v2888270.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Cicer arietinum] gi|502165379|ref|XP_004513553.1| chr3 35692151 35699684 +
2 domain predictions
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Lj3g3v2888290.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Glycine max] gi|356544860|ref|XP_003540865.1| chr3 35706091 35711245 +
4 domain predictions
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Lj3g3v3080210.1
n.a. n.a. chr3 38427883 38431559 -
3 domain predictions
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Lj3g3v3375730.1
n.a. CM0216.590.nc [Lotus japonicus] gi|164605527|dbj|BAF98593.1| chr3 41496565 41500650 -
4 domain predictions
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Lj3g3v3375730.3
n.a. S-receptor kinase-like protein 3 [Lotus japonicus] gi|33945886|emb|CAE45596.1| chr3 41497860 41499486 -
4 domain predictions
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Lj3g3v3375750.1
n.a. CM0216.570.nc [Lotus japonicus] gi|164605525|dbj|BAF98591.1| chr3 41501610 41512530 -
4 domain predictions
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Lj3g3v3375760.2
n.a. S-receptor kinase-like protein 2 [Lotus japonicus] gi|33945885|emb|CAE45595.1| chr3 41502576 41510652 +
4 domain predictions
 –
Lj3g3v3430230.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr3 42121977 42125580 +
4 domain predictions
 –
Lj3g3v3430300.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr3 42137969 42142280 +
4 domain predictions
 –
Lj3g3v3430300.2
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr3 42138651 42141528 +
4 domain predictions
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Lj4g3v0424250.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like [Glycine max] gi|356527947|ref|XP_003532567.1| chr4 5698730 5703096 +
4 domain predictions
 –
Lj4g3v0424270.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357475991|ref|XP_003608281.1| chr4 5707741 5714818 -
4 domain predictions
 –
Lj5g3v1097030.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Cicer arietinum] gi|502178680|ref|XP_004516311.1| chr5 17621293 17624028 +
3 domain predictions
 –
Lj5g3v1097030.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Cicer arietinum] gi|502178680|ref|XP_004516311.1| chr5 17621293 17631278 +
3 domain predictions
 –
Lj6g3v2116920.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24716994 24720932 -
4 domain predictions
 –
Lj6g3v2117930.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24723812 24724921 -
4 domain predictions
 –
Lj6g3v2117930.2
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357475991|ref|XP_003608281.1| chr6 24723812 24724921 -
4 domain predictions
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Lj6g3v2128980.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Cicer arietinum] gi|502167944|ref|XP_004514287.1| chr6 24738264 24745354 +
4 domain predictions
 –
Lj6g3v2128980.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Cicer arietinum] gi|502167944|ref|XP_004514287.1| chr6 24738264 24741213 +
4 domain predictions
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Lj6g3v2130010.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Cicer arietinum] gi|502178680|ref|XP_004516311.1| chr6 24751493 24756604 +
4 domain predictions
 –
Lj6g3v2130020.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24757026 24760897 -
4 domain predictions
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Lj6g3v2130140.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Vitis vinifera] gi|359496521|ref|XP_002262970.2| chr6 24763322 24770952 -
4 domain predictions
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Lj6g3v2130160.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120-like [Cicer arietinum] gi|502077547|ref|XP_004485683.1| chr6 24774235 24778227 +
4 domain predictions
 –
Lj6g3v2130160.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357446275|ref|XP_003593415.1| chr6 24774235 24778227 +
4 domain predictions
 –
Lj6g3v2132190.3
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24794572 24800242 +
4 domain predictions
 –
Lj6g3v2132200.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077543|ref|XP_004485682.1| chr6 24800313 24804123 -
4 domain predictions
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Lj6g3v2132210.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356546698|ref|XP_003541760.1| chr6 24805330 24809314 +
4 domain predictions
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LotjaGi1g1v0105500.1
n.a. Serine/threonine-protein kinase; TAIR: AT5G60900.1 receptor-like protein kinase 1; Swiss-Prot: sp|Q0JEU6|LERK3_ORYSJ G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3; TrEMBL-Plants: tr|A0A072V8H5|A0A072V8H5_MEDTR Lectin kinase family protein; Found in the gene: LotjaGi1g1v0105500 LjG1.1_chr1 16291268 16296820 +
3 domain predictions
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LotjaGi1g1v0105500.2
n.a. Serine/threonine-protein kinase; TAIR: AT5G60900.1 receptor-like protein kinase 1; Swiss-Prot: sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1; TrEMBL-Plants: tr|A0A072V8H5|A0A072V8H5_MEDTR Lectin kinase family protein; Found in the gene: LotjaGi1g1v0105500 LjG1.1_chr1 16291367 16296641 +
3 domain predictions
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LotjaGi1g1v0105600_LC.1
n.a. Serine/threonine-protein kinase; TAIR: AT5G60900.1 receptor-like protein kinase 1; Swiss-Prot: sp|Q0JEU6|LERK3_ORYSJ G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3; TrEMBL-Plants: tr|A0A072V8H5|A0A072V8H5_MEDTR Lectin kinase family protein; Found in the gene: LotjaGi1g1v0105600_LC LjG1.1_chr1 16310183 16311874 +
3 domain predictions
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LotjaGi1g1v0202300.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|A0A072TQF1|A0A072TQF1_MEDTR S-locus lectin kinase family protein; Found in the gene: LotjaGi1g1v0202300 LjG1.1_chr1 43007685 43017685 +
4 domain predictions
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LotjaGi1g1v0202800.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|A0A151RGD5|A0A151RGD5_CAJCA Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0202800 LjG1.1_chr1 43506426 43515606 -
4 domain predictions
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LotjaGi1g1v0358400.1
n.a. Serine/threonine-protein kinase; TAIR: AT2G19130.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1; TrEMBL-Plants: tr|A0A1J7HQ17|A0A1J7HQ17_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0358400 LjG1.1_chr1 83317425 83320466 -
3 domain predictions
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LotjaGi1g1v0452500.1
n.a. Serine/threonine-protein kinase; TAIR: AT3G51710.1 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein; Swiss-Prot: sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1; TrEMBL-Plants: tr|I1N359|I1N359_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0452500 LjG1.1_chr1 95277890 95280785 +
2 domain predictions
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LotjaGi1g1v0468400.1
n.a. Serine/threonine-protein kinase; TAIR: AT1G11330.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330; TrEMBL-Plants: tr|A0A072TZ09|A0A072TZ09_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0468400 LjG1.1_chr1 97887702 97891834 -
4 domain predictions
 –
LotjaGi1g1v0511500.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|I1KE68|I1KE68_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0511500 LjG1.1_chr1 103320489 103325085 +
4 domain predictions
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LotjaGi1g1v0720700.1
n.a. Serine/threonine-protein kinase; TAIR: AT2G41890.1 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein; Swiss-Prot: sp|P93756|SD31_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1; TrEMBL-Plants: tr|I1JNE6|I1JNE6_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0720700 LjG1.1_chr1 129142550 129146631 -
4 domain predictions
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LotjaGi2g1v0346900.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|I1KE68|I1KE68_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0346900 LjG1.1_chr2 82351436 82373304 -
4 domain predictions
 –
LotjaGi2g1v0346900.2
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|I1KE68|I1KE68_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0346900 LjG1.1_chr2 82356313 82367452 -
4 domain predictions
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LotjaGi2g1v0346900.3
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|A0A151SMC5|A0A151SMC5_CAJCA Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0346900 LjG1.1_chr2 82356313 82373228 -
4 domain predictions
 –
LotjaGi2g1v0346900.4
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|K7KXE1|K7KXE1_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0346900 LjG1.1_chr2 82356313 82373228 -
4 domain predictions
 –
LotjaGi3g1v0008800.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G32300.1 S-domain-2 5; Swiss-Prot: sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5; TrEMBL-Plants: tr|A0A1J7HBM8|A0A1J7HBM8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0008800 LjG1.1_chr3 1019567 1022826 +
3 domain predictions
 –
LotjaGi3g1v0017000.1
n.a. Serine/threonine-protein kinase; TAIR: AT3G16030.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9LW83|CE101_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase CES101; TrEMBL-Plants: tr|V7D2F6|V7D2F6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0017000 LjG1.1_chr3 1773406 1775556 +
3 domain predictions
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LotjaGi3g1v0034400.1
n.a. Receptor protein kinase, putative; TAIR: AT3G16030.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9LW83|CE101_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase CES101; TrEMBL-Plants: tr|G7L986|G7L986_MEDTR Cysteine-rich RLK (Receptor-like kinase) protein; Found in the gene: LotjaGi3g1v0034400 LjG1.1_chr3 3661488 3667624 +
3 domain predictions
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LotjaGi3g1v0034500.1
n.a. Receptor protein kinase, putative; TAIR: AT3G16030.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9LW83|CE101_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase CES101; TrEMBL-Plants: tr|A0A072U017|A0A072U017_MEDTR Cysteine-rich RLK (Receptor-like kinase) protein; Found in the gene: LotjaGi3g1v0034500 LjG1.1_chr3 3668364 3672089 +
3 domain predictions
 –
LotjaGi3g1v0080100.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|A0A0B2RR49|A0A0B2RR49_GLYSO Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0080100 LjG1.1_chr3 8879853 8884159 +
4 domain predictions
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LotjaGi3g1v0080200.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|A0A151SVK7|A0A151SVK7_CAJCA Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0080200 LjG1.1_chr3 8886643 8890760 +
4 domain predictions
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LotjaGi3g1v0080300.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|A0A151SVK7|A0A151SVK7_CAJCA Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0080300 LjG1.1_chr3 8897801 8902164 +
4 domain predictions
 –
LotjaGi3g1v0080400.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|A0A151SVK7|A0A151SVK7_CAJCA Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0080400 LjG1.1_chr3 8907504 8913834 +
4 domain predictions
 –